Contig 011061:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022K16Sequence456002427 (2)ref|XP_006352796.1|2e-53PREDICTED: NPL4-like protein 1-like [Solanum tuberosum]731011061 (4)ref|XP_010279622.1|2e-81PREDICTED: NPL4-like protein 1 [Nelumbo nucifera]
JMFN005L01Sequence515011061 (4)gb|ACU21270.1|4e-49unknown [Glycine max]
JMFN016G09Sequence618011061 (4)gb|ACU21270.1|3e-51unknown [Glycine max]
JMSF044P11Sequence658002427 (2)ref|XP_006352796.1|5e-101PREDICTED: NPL4-like protein 1-like [Solanum tuberosum]598011061 (4)gb|ACU21270.1|2e-51unknown [Glycine max]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN016G09+ ATTGCAATAAAAGGAAATCATAAAAATAAT
rJMSF044P11- AT
                      ____________________________________________________________
consensus ATTGCAATAAAAGGAAATCATAAAAATAAT
 
. : . : . : . : . : . :
JMFN005L01+ AAACAAACAACTCAGAAAATCTTAATAAAACTAAATAAAT
JMFN016G09+ ATNCAAATATAGTATAACATAAACAAACAACTCAGAAAATCTTAATAAAACTAAATAAAT
rJMSF044P11- ATACAAATATAGTATAACATAAACAAACAACTCAGAAAATCTTAATAAAACTAAATAAAT
rJMFF022K16- ACTAAATAAAT
                      ____________________________________________________________
consensus ATACAAATATAGTATAACATAAACAAACAACTCAGAAAATCTTAATAAAACTAAATAAAT
 
. : . : . : . : . : . :
JMFN005L01+ AATGTATTGTTTGATTTTAGTTACATCAGCAAATGTGCAAGGCATACAACATTATCAGAG
JMFN016G09+ AATGTATTGTTTGATTTTAGTTACATCAGCAAATGTGCAAGGCATACAACATTATCAGAG
rJMSF044P11- AATGTATTGTTTGATTTTAGTTACATCAGCAAATGTGCAAGGCATACAACATTATCAGAG
rJMFF022K16- NATGTATTGTTTGATTTTAGTTACATCAGCANATGTGCNAGGCATACAACATTATCANAG
                      ____________________________________________________________
consensus AATGTATTGTTTGATTTTAGTTACATCAGCAAATGTGCAAGGCATACAACATTATCAGAG
 
. : . : . : . : . : . :
JMFN005L01+ AAGTCTGCCCATTGCAAAGGCACTGAGGTTTGATTCCATGGGGGGCTTTTGTGAGGTCAA
JMFN016G09+ AAGTCTGCCCATTGCAAAGGCACTGAGGTTTGATTCCATGGGGGGCTTTTGTGAGGTCAA
rJMSF044P11- AAGTCTGCCCATTGCAAAGGCACTGAGGTTTGATTCCATGGGGGGCTTTTGTGAGGTCAA
rJMFF022K16- AAGTCTGCCCATTGCANAGGCACTGAGGTTTGATTCCATGGGGGGCTTTTGTGAGGTCAA
                      ____________________________________________________________
consensus AAGTCTGCCCATTGCAAAGGCACTGAGGTTTGATTCCATGGGGGGCTTTTGTGAGGTCAA
 
. : . : . : . : . : . :
JMFN005L01+ TTTTGGCTGGCGTTTTCTCATATCTCATCATCCCACTCCTTTGCTGATTCATATCCTAGT
JMFN016G09+ TTTTGGCTGGCGTTTTCTCATATCTCATCATCCCACTCCTTTGCTGATTCATATCCTAGT
rJMSF044P11- TTTTGGCTGGCGTTTTCTCATATCTCATCATCCCACTCCTTTGCTGATTCATATCCTAGT
rJMFF022K16- TTTTGGCTGGCGTTTTCTCATATCTCATCATCCCACTCCTTTGCTGATTCATATCCTAGN
                      ____________________________________________________________
consensus TTTTGGCTGGCGTTTTCTCATATCTCATCATCCCACTCCTTTGCTGATTCATATCCTAGT
 
. : . : . : . : . : . :
JMFN005L01+ GTGGCTTAAGAAGCACTGGCCATGGACTCTATAAGGAGTTGATAACCCTCGGGGACGGGT
JMFN016G09+ GTGGCTTAAGAAGCACTGGCCATGGACTCTATAAGGAGTTGATAACCCTCGGGGACGGGT
rJMSF044P11- GTGGCTTAAGAAGCACTGGCCATGGACTCTATAAGGAGTTGATAACCCTCGGGGACGGGT
rJMFF022K16- GTGGCTTAAGAAGCACTGGCCATGGACTCTATAAGGAGTTGATAACCCTCGGGGACGGGT
                      ____________________________________________________________
consensus GTGGCTTAAGAAGCACTGGCCATGGACTCTATAAGGAGTTGATAACCCTCGGGGACGGGT
 
. : . : . : . : . : . :
JMFN005L01+ GTCTGTGTTTGCACACATTCAGCTAATGCAGGTACATCAGCATTAATGTCCAAAAACCGT
JMFN016G09+ GTCTGTGTTTGCACACATTCAGCTAATGCAGGTACATCAGCATTAATGTCCAAAAACCGT
rJMSF044P11- GTCTGTGTTTGCACACATTCAGCTAATGCAGGTACATCAGCATTAATGTCCAAAAACCGT
rJMFF022K16- GTCTGTGTTTGCACACATTCANCTAATGCANGTACATCANCATTAATGTCCAAAAACCGT
                      ____________________________________________________________
consensus GTCTGTGTTTGCACACATTCAGCTAATGCAGGTACATCAGCATTAATGTCCAAAAACCGT
 
. : . : . : . : . : . :
JMFN005L01+ CCCAACAAGAGCATCAGGTGAAAATCTGAAATTCGCTTCACGAATGGGACACTCTTTGTT
JMFN016G09+ CCCAACAAGAGCATCAGGTGAAAATCTGAAATTCGCTTCACGAATGGGACACTCTTTGTT
rJMSF044P11- CCCAACAAGAGCATCAGGTGAAAATCTGAAATTCGCTTCACGAATGGGACACTCTTTGTT
rJMFF022K16- CCCAACAAGANCATCAGGTGAAAATCTGAAATTCNCTTCACNAATGGGACACTCTTTGTT
                      ____________________________________________________________
consensus CCCAACAAGAGCATCAGGTGAAAATCTGAAATTCGCTTCACGAATGGGACACTCTTTGTT
 
. : . : . : . : . : . :
JMFN005L01+ CGATCAAAATGATTTTTCAGTGCCCTCATTGTCACAGGAACATTTCTGTTCTCGATAGGG
JMFN016G09+ CGATCAAAATGATTTTTCAGTGCCCTCATTGTCACAGGAACATTTCTGTTCTCGATAGGG
rJMSF044P11- CGATCAAAATGATTTTTCAGTGCCCTCATTGTCACAGGAACATTTCTGTTCTCGATAGGG
rJMFF022K16- CGATCAAAATGATTTTTCNGTGCCCTCATTGTCACAGGAACATTTCTGTTCTCGATAGGG
                      ____________________________________________________________
consensus CGATCAAAATGATTTTTCAGTGCCCTCATTGTCACAGGAACATTTCTGTTCTCGATAGGG
 
. : . : . : . : . : . :
JMFN005L01+ AAAGCCGATGAAAGTGGACCCTGGTGATCAGCAATCTTAACAACAACCAAGAAAA
JMFN016G09+ AAAGCCGATGAAAGTGGACCCTGGTGATCAGCAATCTTAACAACAACCAAGAAAAAATCA
rJMSF044P11- AAAGCCGATGAAAGTGGACCCTGGTGATCAGCAATCTTAACAACAACCAAGAAAAAATCA
rJMFF022K16- AAAGCCGATGAAAGNGGACCCTGGTGATCAGCAATCTTAACAACAACCAAGAAAAAATCA
                      ____________________________________________________________
consensus AAAGCCGATGAAAGTGGACCCTGGTGATCAGCAATCTTAACAACAACCAAGAAAAAATCA
 
. : . : . : . : . : . :
JMFN016G09+ TTGTCAACCTCTTTAGTATCCTTCACTCCAACAACCACGTCTTTCTTC
rJMSF044P11- TTGTCAACCTCTTNAGTATCCTTCACTCCAACAACCACGTCTTTCTTCATCCTTGA
rJMFF022K16- TTGTCAACCTCTTTAGTATCCTTCACTCCAACAACCACGTCTTTCTTCATCCTTGAAAGC
                      ____________________________________________________________
consensus TTGTCAACCTCTTTAGTATCCTTCACTCCAACAACCACGTCTTTCTTCATCCTTGAAAGC
 
. : . : . : . : . : . :
rJMFF022K16- TTGGGATCTAAATCTTCNGTGCCTTCTGTCTCAAACCACCCTTCCTTGAACAATCTGATA
                      ____________________________________________________________
consensus TTGGGATCTAAATCTTCNGTGCCTTCTGTCTCAAACCACCCTTCCTTGAACAATCTGATA
 
. : . : . : . : . : . :
rJMFF022K16- CATATATCACTCATCTGGAATGCCTCAAAATGCACATCTGCACCTCCATCCTCGNTTACC
                      ____________________________________________________________
consensus CATATATCACTCATCTGGAATGCCTCAAAATGCACATCTGCACCTCCATCCTCGNTTACC
 
. : . : . : . : . : . :
rJMFF022K16- TCGAGNTTAACCATGGCTGTCANCCACTCCTTCNACTCGNCCTCCCCGTGCAGCTCAGCA
                      ____________________________________________________________
consensus TCGAGNTTAACCATGGCTGTCANCCACTCCTTCNACTCGNCCTCCCCGTGCAGCTCAGCA