| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012H13 | Sequence | 529 | 011059 (6) | ref|XP_009795307.1| | 255 | PREDICTED: uncharacterized protein LOC104242030 [Nicotiana sylvestris] | 726 | 011059 (6) | ref|XP_006352862.1| | 245 | PREDICTED: uncharacterized protein LOC102599612 [Solanum tuberosum] |
| JMFF022F13 | Sequence | 406 | 011059 (6) | ref|XP_009795307.1| | 214 | PREDICTED: uncharacterized protein LOC104242030 [Nicotiana sylvestris] | 543 | 011059 (6) | ref|XP_002527671.1| | 7e-05 | protein with unknown function [Ricinus communis] gb|EEF34742.1| protein with unk |
| JMSF025K14 | Sequence | 624 | 011059 (6) | ref|XP_009795307.1| | 345 | PREDICTED: uncharacterized protein LOC104242030 [Nicotiana sylvestris] | |||||
| JMSF050K04 | Sequence | 670 | 011059 (6) | ref|XP_003531960.1| | 90.9 | PREDICTED: uncharacterized protein LOC100784644 [Glycine max] | |||||
This contig is upended
. : . : . : . : . : . :
JMFF012H13- AAACCCAATTCTCTCTCTCTCTCTCTATATCTCTATATCTCTCTCTTTGTATAA
____________________________________________________________
consensus AAACCCAATTCTCTCTCTCTCTCTCTATATCTCTATATCTCTCTCTTTGTATAA
. : . : . : . : . : . :
JMFF022F13- GGTTTCTGCTCAGAGTTTCAGAGGCGTTACTGCTGTTACTACTCGCACT
JMFF012H13- TTGTATCTATAGGTTTCTGCTCAGAGTTTCAGAGGCGTTACTGCTGTTACTACTCGCACT
JMSF025K14- GGTTTCTGCTCANAGTTTCNGAGGCGTTACTGCTGNTACTACTCGCACT
____________________________________________________________
consensus TTGTATCTATAGGTTTCTGCTCAGAGTTTCAGAGGCGTTACTGCTGTTACTACTCGCACT
. : . : . : . : . : . :
JMFF022F13- ATTCTATAATCTATACCGTTCTTTGCATTGAAGCCGTCTTTCAAGCTGGCGATCGATAAT
JMFF012H13- ATTCTATAATCTATACCGTTCTTTGCATTGAAGCCGTCTTTCAAGCTGGCGATCGATAAT
JMSF025K14- ATTCTATAATCTATACCGTTCTTTGCATTGAAGCCGTCTTTCAAGCTGGAGATCGATAAT
____________________________________________________________
consensus ATTCTATAATCTATACCGTTCTTTGCATTGAAGCCGTCTTTCAAGCTGGCGATCGATAAT
. : . : . : . : . : . :
JMFF022F13- CAGGAAACCACCGTCCGGGAATTCAAGCCGAAGAACCGGCGAATCATGGGAGCTGGAGGG
JMFF012H13- CAGGAAACCACCGTCCGGGAATTCAAGCCGAAGAACCGGCGAATCATGGGAGCTGGAGGG
JMSF025K14- CAGGAAACCACCGTCCGGGAATTCAAGCCGAAGAACCGGCGAATCATGGGAGCTGGAGGG
____________________________________________________________
consensus CAGGAAACCACCGTCCGGGAATTCAAGCCGAAGAACCGGCGAATCATGGGAGCTGGAGGG
. : . : . : . : . : . :
JMFF022F13- CCGGACGAGGACGATAACCGGTGGCCGCCATGGCTGAAGCCTCTGCTCCGAGAGCGATTC
JMFF012H13- CCGGACGAGGACGATAACCGGTGGCCGCCATGGCTGAAGCCTCTGCTCCGAGAGCGATTC
JMSF025K14- CCGGACGAGGACGATAACCGGTGGCCGCCATGGCTGAAGCCTCTGCTCCGAGAGCGATTC
____________________________________________________________
consensus CCGGACGAGGACGATAACCGGTGGCCGCCATGGCTGAAGCCTCTGCTCCGAGAGCGATTC
. : . : . : . : . : . :
JMFF022F13- TTCGTTCAATGCAAACTCCACGCCGATTCCCACAAGAGCGAATGCAATATGTACTGCCTT
JMFF012H13- TTCGTTCAATGCAAACTCCACGCCGATTCCCACAAGAGCGAATGCAATATGTACTGCCTT
JMSF025K14- TTCGTTCAATGCAAACTCCACGCCGATTCCCACAAGANCGAATGCAATATGTACTGCCTT
rJMFF012H13+ CAAGAGCGAATGCAATATGTACTGCCTT
____________________________________________________________
consensus TTCGTTCAATGCAAACTCCACGCCGATTCCCACAAGAGCGAATGCAATATGTACTGCCTT
. : . : . : . : . : . :
JMFF022F13- GACTGCACCAATGGCGCTCTCTGTTCACTCTGCTTAGCCAATCACAAAGACCACCGCGCC
JMFF012H13- GACTGCACCAATGGCGCTCTCTGTTCACTCTGCTTAGCCAATCACAAAGACCACCGCGCC
JMSF025K14- GACTGCACCAATGGCGCTCTCTGTTCGCTCTGCTTAGCCAATCACAAAGACCACCGCGCC
rJMFF012H13+ GACTGCACCAATGGCGCTCTCTGTTCACTCTGCTTAGCCAATCACAAAGACCACCGCGCC
____________________________________________________________
consensus GACTGCACCAATGGCGCTCTCTGTTCACTCTGCTTAGCCAATCACAAAGACCACCGCGCC
. : . : . : . : . : . :
JMFF022F13- ATTCAGATACGGAGGTCTTCATACCATGATGTGATCAGAGTTAATGAGAT
JMFF012H13- ATTCAGATACGGAGGTCTTCATACCATGATGTGATCAGAGTTAATGAGATTCAGAAGTTT
JMSF025K14- ATTCAGATACGGAGGTCTTCATACCATGATGTGATCAGAGTTAATGAGATTCAGAAGTTT
rJMFF012H13+ ATTCAGATACGGAGGTCTTCATACCATGATGTGATCAGAGTTAATGAGATTCAGAAGTTT
____________________________________________________________
consensus ATTCAGATACGGAGGTCTTCATACCATGATGTGATCAGAGTTAATGAGATTCAGAAGTTT
. : . : . : . : . : . :
JMFF012H13- TTGGACATCTCTTCGGTTCAGACCTACATTATCAACAGCGCTAAAGTTGTGTTCT
JMSF025K14- TTGGACATCTCTTCGGTTCAGACCTACATTATCAACAGCGCTAAAGTTGTGTTCTTGAAT
rJMFF012H13+ TTGGACATCTCTTCGGTTCAGACCTACATTATCAACAGCGCTAAAGTTGTGTTCTTGAAT
____________________________________________________________
consensus TTGGACATCTCTTCGGTTCAGACCTACATTATCAACAGCGCTAAAGTTGTGTTCTTGAAT
. : . : . : . : . : . :
JMSF025K14- GAACGGCCGCAGCCCAGGCCGGGAAAGGGCGTCACCAATACCTGTGAGGTCTGTGAGCGT
rJMFF012H13+ GAACGGCCGCAGCCCAGGCCGGGAAAGGGCGTCACCAATACCTGTGAGGTCTGTGAGCGT
____________________________________________________________
consensus GAACGGCCGCAGCCCAGGCCGGGAAAGGGCGTCACCAATACCTGTGAGGTCTGTGAGCGT
. : . : . : . : . : . :
JMSF025K14- AGCCTCCTTGATTCCTTCCGCTTCTGCTCTCTTGGCTGCAAGATTGTCGGGACATCCAAG
rJMFF012H13+ AGCCTCCTTGATTCCTTCCGCTTCTGCTCTCTTGGCTGCAAGATTGTCGGGACATCCAAG
____________________________________________________________
consensus AGCCTCCTTGATTCCTTCCGCTTCTGCTCTCTTGGCTGCAAGATTGTCGGGACATCCAAG
. : . : . : . : . : . :
JMSF025K14- AACTTCGTGA
rJMFF012H13+ AACTTCGTGAAGAAGCCGAAGCACTTCTCGGAGAAGAAGAGGGCGGCGGCGGCGGCGGTG
____________________________________________________________
consensus AACTTCGTGAAGAAGCCGAAGCACTTCTCGGAGAAGAAGAGGGCGGCGGCGGCGGCGGTG
. : . : . : . : . : . :
rJMFF012H13+ GGTTCAGACTCCGAGGACTCCTACAGCAGCAGCAGCAGTCACGGCGGCCGCCAACTTCTG
rJMSF050K04+ GCCGCCAACTTTTG
rJMFF022F13+ TG
____________________________________________________________
consensus GGTTCAGACTCCGAGGACTCCTACAGCAGCAGCAGCAGTCACGGCGGCCGCCAACTTTTG
. : . : . : . : . : . :
rJMFF012H13+ GCAACTACAGGGCGGCGAAGAGAAGAAAGGGAATTCCACATAGGGCCCCAATGGGAGGAC
rJMSF050K04+ GCAACTACAGGGCGGCGAAGAGAAGAAAGGGAATTCCNCATAGGGCCCCAATGGGNGGAC
rJMFF022F13+ GCAACTACAGGGCGGNGAAGAGAAGAAAGGGAATTCCNCATAGGGCCCCAATGGGAGGAC
____________________________________________________________
consensus GCAACTACAGGGCGGCGAAGAGAAGAAAGGGAATTCCACATAGGGCCCCAATGGGAGGAC
. : . : . : . : . : . :
rJMFF012H13+ TGATCATAGAGTTCTACTAAGCAAAATTTGCTAATCACCCCTCAATATTTCTCCTAATCA
rJMSF050K04+ TGATCATAGAGTTNTACTAAGCAAAATTTGCTAATCNCCCCTCAATATTTCTCCTAATCA
rJMFF022F13+ TGATCATAGAGTTTTACTAAGCAAAATTTGNTAATCNCCCCTCAATATTTNTCCTAATCA
____________________________________________________________
consensus TGATCATAGAGTTTTACTAAGCAAAATTTGCTAATCACCCCTCAATATTTCTCCTAATCA
. : . : . : . : . : . :
rJMFF012H13+ TGAAAATCCCCCCAACACTTGCGCCTTTTTACCTTAAAGGCCAGTGTCCCCACCCCCCAT
rJMSF050K04+ TGAAAATCCCCCCAACACTTGCGCCTTTTTACCTTAAAGGCCAGTGTCCCCNCCCCCCAT
rJMFF022F13+ TGAAAATCCCCCCAACACTTGCGCCTTTTTNCCTTAAAGGCCAGTGTCCCCACCCCCCAT
____________________________________________________________
consensus TGAAAATCCCCCCAACACTTGCGCCTTTTTACCTTAAAGGCCAGTGTCCCCACCCCCCAT
. : . : . : . : . : . :
rJMFF012H13+ CATATATTGTACATAGTAGAAGACGCGAATACAAGAATGCTGATGCCTGATGGGAAAAAC
rJMSF050K04+ CATATATTGTACATAGTAGAAGACGCGAATNCAAGAATGCTGATGCCTGATGGGAAAAAC
rJMFF022F13+ CATATATTGTACATAGTAGAAGACGCGAATACAAGAATGCTGATGCCTGATGGGAAAAAC
____________________________________________________________
consensus CATATATTGTACATAGTAGAAGACGCGAATACAAGAATGCTGATGCCTGATGGGAAAAAC
. : . : . : . : . : . :
rJMFF012H13+ AAAAAATGCAGGAGCAGAAATGGGAATAAGGAAAAG
rJMSF050K04+ AAAAAATGCNGGAGCNGAAATGGGAATAAGGAAAAGTGGAAGGACTAAAGTNTAAATTTG
rJMFF022F13+ AAAAAATGCAGGAGCAGAAATGGGAATAAGGAAAAGTGGAAGGACTAAAGTTTAAATTTG
____________________________________________________________
consensus AAAAAATGCAGGAGCAGAAATGGGAATAAGGAAAAGTGGAAGGACTAAAGTTTAAATTTG
. : . : . : . : . : . :
rJMSF050K04+ TTAATGTAGAAGTTGGGCTTAGAAAATAAGCTATAATATATTATATTATATTATATAGTA
rJMFF022F13+ TTAATGTAGAAGTTGGGCTTAGAAAATAAGCTATAATATATTATATTATATTATATAGTA
____________________________________________________________
consensus TTAATGTAGAAGTTGGGCTTAGAAAATAAGCTATAATATATTATATTATATTATATAGTA
. : . : . : . : . : . :
rJMSF050K04+ TGATGATGGTGAAATGTCAAATACTCCGTACCTNGAGAGTGTTTATACATATAAGAAAGT
rJMFF022F13+ TGATGATGGTGAAATGTCAAATACTCCGTA-CTAGAGAGTGTTTATACATATAAGAAAGT
____________________________________________________________
consensus TGATGATGGTGAAATGTCAAATACTCCGTACCTAGAGAGTGTTTATACATATAAGAAAGT
. : . : . : . : . : . :
rJMSF050K04+ TTT
rJMFF022F13+ TTTGTTTGTATAAAAATGAAATAAAAAAAAAATGTATATACTTGCCTCTTTGTGTTACAA
____________________________________________________________
consensus TTTGTTTGTATAAAAATGAAATAAAAAAAAAATGTATATACTTGCCTCTTTGTGTTACAA
. : . : . : . : . : . :
rJMFF022F13+ TATTTTAACCATGCCCTTTTATAATGTACTTAGTTCCTTAATTTCTTTAATTTATACATT
____________________________________________________________
consensus TATTTTAACCATGCCCTTTTATAATGTACTTAGTTCCTTAATTTCTTTAATTTATACATT