Contig 011057:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022B02Sequence520011057 (2)emb|CDP04689.1|1e-48unnamed protein product [Coffea canephora]712011057 (2)emb|CDP04689.1|4e-54unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF022B02-                                                             ACTCACAGTC
                      ____________________________________________________________
consensus                                                               ACTCACAGTC
 
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JMFF022B02-           AGAGATAGAGTCTTAAGCTAGCTCAGCCTCTCCTCTCCTCTCCATGGCTTTCTCTTCTTC
                      ____________________________________________________________
consensus             AGAGATAGAGTCTTAAGCTAGCTCAGCCTCTCCTCTCCTCTCCATGGCTTTCTCTTCTTC
 
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JMFF022B02-           CTTCTCTTCATTCACATCACCATTCCCACGCACTATTAGGAAGAGATGTTCATTTACTCT
rJMFF022B02+                  CATTCACATCACCATTCCCACGCACTATTAGGAAGAGATGTTCATTTACTCT
                      ____________________________________________________________
consensus             CTTCTCTTCATTCACATCACCATTCCCACGCACTATTAGGAAGAGATGTTCATTTACTCT
 
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JMFF022B02-           TAGCCGCAGCAGCAGCAGCATACGCTTCATCGTCAAAGCTGAGGAATCTTCCCAACCACC
rJMFF022B02+          TAGCCGCAGCAGCAGCAGCATACGCTTCATCGTCAAAGCTGAGGAATCTTCCCAACCACC
                      ____________________________________________________________
consensus             TAGCCGCAGCAGCAGCAGCATACGCTTCATCGTCAAAGCTGAGGAATCTTCCCAACCACC
 
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JMFF022B02-           TCAGACTCCTCAAAATGTTGCTGCTGCAGAGACAAAACCCGAAGCAGCAGCCTCCTCTGA
rJMFF022B02+          TCAGACTCCTCAAAATGTTGCTGCTGCAGAGACAAAACCCGAAGCAGCAGCCTCCTCTGA
                      ____________________________________________________________
consensus             TCAGACTCCTCAAAATGTTGCTGCTGCAGAGACAAAACCCGAAGCAGCAGCCTCCTCTGA
 
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JMFF022B02-           TGCCCCCCCTCCTCCTCCTCCTAAGCCAAAAAAACCTGTTTATTCCATGAAGAAAGGGCA
rJMFF022B02+          TGCCCCCCCTCCTCNTCCTCNTAAGCCAAAAAAACCTGTTTATTCCATGAAGAAAGGGCA
                      ____________________________________________________________
consensus             TGCCCCCCCTCCTCCTCCTCCTAAGCCAAAAAAACCTGTTTATTCCATGAAGAAAGGGCA
 
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JMFF022B02-           GATTGTGAGAGTGGATAAAGAGAAGTATCTCAACAGTATCAATTATCTGTCTGTTGGGCA
rJMFF022B02+          GATTGTGAGAGTGGATAAAGAGAAGTATCTCAACAGTATCAATTATCTGTCTGTTGGGCA
                      ____________________________________________________________
consensus             GATTGTGAGAGTGGATAAAGAGAAGTATCTCAACAGTATCAATTATCTGTCTGTTGGGCA
 
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JMFF022B02-           TCCACCTTACTACAAAGGCCTGGAATACATATATGAAGATCGTGGCGAGGTGCTGGACAT
rJMFF022B02+          TCCACCTTACTACAAAGGCCTGGAATACATATATGAAGATCGTGGCGAGGTGCTGGACAT
                      ____________________________________________________________
consensus             TCCACCTTACTACAAAGGCCTGGAATACATATATGAAGATCGTGGCGAGGTGCTGGACAT
 
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JMFF022B02-           TCGGATATTCGAGACAGGGGAATATGCACTTATTGGATGGGTTGGAGTACCAACTGCACC
rJMFF022B02+          TCGGATATTCGAGACAGGGGAATATGCACTTATTGGATGGGTTGGAGTACCAACTGCACC
                      ____________________________________________________________
consensus             TCGGATATTCGAGACAGGGGAATATGCACTTATTGGATGGGTTGGAGTACCAACTGCACC
 
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JMFF022B02-           GGCTTGGCTTCCAACAGAGATTCTCATTAA                              
rJMFF022B02+          GGCTTGGCTTCCAACAGAGATTCTCATTAAGTCGGACAAGCTCAACTACGAGAGGATTTG
                      ____________________________________________________________
consensus             GGCTTGGCTTCCAACAGAGATTCTCATTAAGTCGGACAAGCTCAACTACGAGAGGATTTG
 
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rJMFF022B02+          ATCAAGGTTCCAGAAGGCAAAGCAGGCTGCATCAAGTTATTCATCACAAAATCTTCAAGA
                      ____________________________________________________________
consensus             ATCAAGGTTCCAGAAGGCAAAGCAGGCTGCATCAAGTTATTCATCACAAAATCTTCAAGA
 
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rJMFF022B02+          TTGAGAACACTTTATTATATCCATACCCATTACCCAGGCTAGATGAGTCAAAAGAAGCAT
                      ____________________________________________________________
consensus             TTGAGAACACTTTATTATATCCATACCCATTACCCAGGCTAGATGAGTCAAAAGAAGCAT
 
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rJMFF022B02+          TTTATGTATTGAGTAAAAAGCAAGGGATGAATGCATTGGATCATAAATGAATTGAAAACA
                      ____________________________________________________________
consensus             TTTATGTATTGAGTAAAAAGCAAGGGATGAATGCATTGGATCATAAATGAATTGAAAACA
 
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rJMFF022B02+          ATCAAATTCCTTCTTTCAAGGAGATTGAAACAGAAAACTAGTGTAATTCCAAAGAAGACC
                      ____________________________________________________________
consensus             ATCAAATTCCTTCTTTCAAGGAGATTGAAACAGAAAACTAGTGTAATTCCAAAGAAGACC