Contig 011056:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021O22Sequence535011056 (2)ref|XP_009782301.1|1e-41PREDICTED: methyl-CpG-binding domain-containing protein 7 isoform X2 [Nicotiana747011056 (2)ref|XP_009782301.1|4e-65PREDICTED: methyl-CpG-binding domain-containing protein 7 isoform X2 [Nicotiana

Alignment

This contig is upended


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JMFF021O22-                                                                 GTCCCA
                      ____________________________________________________________
consensus                                                                   GTCCCA
 
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JMFF021O22-           CTGTCACACCACGCTTCTTTGCTGCCCATGGGGAAACGGAATTCTTCCTCTCTCACGCCC
                      ____________________________________________________________
consensus             CTGTCACACCACGCTTCTTTGCTGCCCATGGGGAAACGGAATTCTTCCTCTCTCACGCCC
 
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JMFF021O22-           TCCTCCGCCTCAATGCACCCTCTCCAAACGCCGCCGCCGTCGTCCCGCCACCACCAAACC
                      ____________________________________________________________
consensus             TCCTCCGCCTCAATGCACCCTCTCCAAACGCCGCCGCCGTCGTCCCGCCACCACCAAACC
 
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JMFF021O22-           GGCGATGAAGACTCTAGCTGCCGTGAACTGGCGCTGGTGACACAACCCGCCATTACTCCC
                      ____________________________________________________________
consensus             GGCGATGAAGACTCTAGCTGCCGTGAACTGGCGCTGGTGACACAACCCGCCATTACTCCC
 
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JMFF021O22-           TTCTCCGGCGACCAGCGGTTCAGCCTGCCCCCCGGTTGGGGTGTGGAAGAAGTCCCTCGC
                      ____________________________________________________________
consensus             TTCTCCGGCGACCAGCGGTTCAGCCTGCCCCCCGGTTGGGGTGTGGAAGAAGTCCCTCGC
 
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JMFF021O22-           TCCGATGGCTCCAGAATTGACAGGTATTACTTGGAGCCGGGGACTGGGCAAAGGTTCAGA
                      ____________________________________________________________
consensus             TCCGATGGCTCCAGAATTGACAGGTATTACTTGGAGCCGGGGACTGGGCAAAGGTTCAGA
 
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JMFF021O22-           TCAATGAGAGAAGTGGAGAGGCATCTCAACGGAGAAACAGTTACTCGTAGTAGGCGGAGC
rJMFF021O22+                                           GAAACAGTTACTCGTAGTAGGCGGAGC
                      ____________________________________________________________
consensus             TCAATGAGAGAAGTGGAGAGGCATCTCAACGGAGAAACAGTTACTCGTAGTAGGCGGAGC
 
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JMFF021O22-           AGATCCAGTGCTCTCATTGTATATAATCGTCGAAAGAGTTCATCCCGGAAGATGATTGTT
rJMFF021O22+          AGATCCAGTGCTCTCATTGTATATAATCGTCGAAAGAGTTCATCCCGGAAGATGATTGTT
                      ____________________________________________________________
consensus             AGATCCAGTGCTCTCATTGTATATAATCGTCGAAAGAGTTCATCCCGGAAGATGATTGTT
 
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JMFF021O22-           TATGGTGGAAAGATGTTGAGGCTGGATGAGAAGGAGCTGAGTGCAAACCGTCAGGCAATT
rJMFF021O22+          TATGGTGGAAAGATGTTGAGGCTGGATGAGAAGGAGCTGAGTGCAAACCGTCAGGCAATT
                      ____________________________________________________________
consensus             TATGGTGGAAAGATGTTGAGGCTGGATGAGAAGGAGCTGAGTGCAAACCGTCAGGCAATT
 
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JMFF021O22-           GTGCCTTCGGGAGCTGTAGTTATCCGGCCCTATCAGCTTCCTGATGGTT           
rJMFF021O22+          GTGCCTTCGGGAGCTGTAGTTATCCGGCCCTATCAGCTTCCTGATGGTTGGATAGTGGAG
                      ____________________________________________________________
consensus             GTGCCTTCGGGAGCTGTAGTTATCCGGCCCTATCAGCTTCCTGATGGTTGGATAGTGGAG
 
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rJMFF021O22+          GAGGTACCCCGTAGATTCGGGAATTCAAGAGATAAGTATTACTACGAACCTGGCACTGGC
                      ____________________________________________________________
consensus             GAGGTACCCCGTAGATTCGGGAATTCAAGAGATAAGTATTACTACGAACCTGGCACTGGC
 
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rJMFF021O22+          AGGAGGTTCCGGTCCAGGGCAGCTGTTGAGAGACACTTGACAGAATTGAGCGAACATGTT
                      ____________________________________________________________
consensus             AGGAGGTTCCGGTCCAGGGCAGCTGTTGAGAGACACTTGACAGAATTGAGCGAACATGTT
 
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rJMFF021O22+          TCCTTGTCTGAAGCACTGGAAGAATTGAACGAGAATCGGCCTCTATCCAAGATGTTTAAA
                      ____________________________________________________________
consensus             TCCTTGTCTGAAGCACTGGAAGAATTGAACGAGAATCGGCCTCTATCCAAGATGTTTAAA
 
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rJMFF021O22+          TTGCACCACCCCACAACTAACTCGGCTTCGCAGAAGAGGAAAACATCTAGAGAAGACTCG
                      ____________________________________________________________
consensus             TTGCACCACCCCACAACTAACTCGGCTTCGCAGAAGAGGAAAACATCTAGAGAAGACTCG
 
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rJMFF021O22+          GTTCTCAGGCCGCCATCAAAAGTCAATTGGGTTCTCGCTAGTCCTAAAGGGGACGAATGG
                      ____________________________________________________________
consensus             GTTCTCAGGCCGCCATCAAAAGTCAATTGGGTTCTCGCTAGTCCTAAAGGGGACGAATGG
 
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rJMFF021O22+          AATCCTTTCATTGGCGATACATTGGTCTCGGATTCTGTAAAGCAAGAATGGAGCAACAGA
                      ____________________________________________________________
consensus             AATCCTTTCATTGGCGATACATTGGTCTCGGATTCTGTAAAGCAAGAATGGAGCAACAGA
 
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rJMFF021O22+          TTTACGTCGCTCATGAACAACGAGACCTCTGCTTGATATTTGTAGGACAGGAAGACATCC
                      ____________________________________________________________
consensus             TTTACGTCGCTCATGAACAACGAGACCTCTGCTTGATATTTGTAGGACAGGAAGACATCC
 
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rJMFF021O22+          TTGTACCTTTCAGGAAAACTATATTTGTAGTTTTATGAAACATAAAAGTACAGACAACAT
                      ____________________________________________________________
consensus             TTGTACCTTTCAGGAAAACTATATTTGTAGTTTTATGAAACATAAAAGTACAGACAACAT
 
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rJMFF021O22+          TGAACTTCATTTGAAAACCTGTGCTGTGTATAAAGGCTGTTATATTCCTAATCGAAATCA
                      ____________________________________________________________
consensus             TGAACTTCATTTGAAAACCTGTGCTGTGTATAAAGGCTGTTATATTCCTAATCGAAATCA