| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020C17 | Sequence | 528 | 011055 (9) | ref|XP_011029826.1| | 2e-104 | PREDICTED: malate dehydrogenase [Populus euphratica] | 721 | 011055 (9) | ref|XP_011091314.1| | 1e-124 | PREDICTED: malate dehydrogenase [Sesamum indicum] |
| JMFF021M12 | Sequence | 628 | 011055 (9) | ref|XP_011091314.1| | 8e-100 | PREDICTED: malate dehydrogenase [Sesamum indicum] | |||||
| JMFF031E02 | Sequence | 523 | 011055 (9) | ref|XP_011091314.1| | 2e-78 | PREDICTED: malate dehydrogenase [Sesamum indicum] | |||||
| JMFS012D08 | Sequence | 626 | 011055 (9) | ref|XP_002533463.1| | 1e-134 | malate dehydrogenase, putative [Ricinus communis] gb|EEF28915.1| malate dehydrog | |||||
| JMSF006K03 | Sequence | 336 | 011055 (9) | gb|KJB27672.1| | 4e-54 | hypothetical protein B456_005G050200 [Gossypium raimondii] | 313 | 011055 (9) | ref|XP_009629053.1| | 2e-18 | PREDICTED: malate dehydrogenase [Nicotiana tomentosiformis] |
| JMSF045B22 | Sequence | 705 | 011055 (9) | ref|XP_011091314.1| | 9e-146 | PREDICTED: malate dehydrogenase [Sesamum indicum] | 746 | 011055 (9) | ref|XP_011091314.1| | 1e-128 | PREDICTED: malate dehydrogenase [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMFS012D08- TCAATTCTCAGAAGTTAGATCAGA
____________________________________________________________
consensus TCAATTCTCAGAAGTTAGATCAGA
. : . : . : . : . : . :
JMFF020C17- ATGGCGAAGGAACCAGTTCGCGTCCTTGTCACTGGTGCTGCAGGACAA
JMSF006K03- ATGGCGAAGGAACCAGTTCGCGTCCTTGTCACTGGTGCTGCAGGACAA
JMFS012D08- TCTCATACAAAAATGGCGAAGGAACCAGTTCGCGTCCTTGTCACTGGTGCTGCAGGACAA
JMSF045B22- ATGGCGAAGGAACCAGTTCGCGTCCTTGTCACTGGTGCTGCAGGACAA
____________________________________________________________
consensus TCTCATACAAAAATGGCGAAGGAACCAGTTCGCGTCCTTGTCACTGGTGCTGCAGGACAA
. : . : . : . : . : . :
JMFF020C17- ATTGGTTATGCTCTGGTCCCCATGGTTGCTAGGGGTGTGATGTTGGGTCCTGATCAGCCC
JMSF006K03- ATTGGTTATGCTCTGGTCCCCATGGTTGCTAGGGGTGTGATGTTGGGTCCTGATCAGCCC
JMFS012D08- ATTGGTTATGCTCTGGTCCCCATGGTTGCTAGGGGTGTGATGTTGGGTCCTGATCAGCCC
JMSF045B22- ATTGGTTATGCTCTGGTCCCCATGGTTGCTAGGGGTGTGATGTTGGGTCCTGATCAGCCC
____________________________________________________________
consensus ATTGGTTATGCTCTGGTCCCCATGGTTGCTAGGGGTGTGATGTTGGGTCCTGATCAGCCC
. : . : . : . : . : . :
JMFF020C17- GTAATTCTCCACATGCTCGATATCCCACCTGCTGCAGAGGCATTGAATGGAGTGAAAATG
JMSF006K03- GTAATTCTCCACATGCTCGATATCCCACCTGCTGCAGAGGCATTGAATGGAGTGAAAATG
JMFS012D08- GTAATTCTCCACATGCTCGATATCCCACCTGCTGCAGAGGCATTGAATGGAGTGAAAATG
JMSF045B22- GTAATTCTCCACATGCTCGATATCCCACCTGCTGCAGAGGCATTGAATGGAGTGAAAATG
____________________________________________________________
consensus GTAATTCTCCACATGCTCGATATCCCACCTGCTGCAGAGGCATTGAATGGAGTGAAAATG
. : . : . : . : . : . :
JMFF020C17- GAGTTAGTTGATGCTGCCTTCCCTCTTCTTAAAGGTGTTGTTGCTACAACTGATGCTGTT
JMSF006K03- GAGTTAGTTGATGCTGCCTTCCCTCTTCTTAAAGGTGTTGTTGCTACAACTGATGCTGTT
JMFS012D08- GAGTTAGTTGATGCTGCCTTCCCTCTTCTTAAAGGTGTTGTTGCTACAACTGATGCTGTT
JMSF045B22- GAGTTAGTTGATGCTGCCTTCCCTCTTCTTAAAGGTGTTGTTGCTACAACTGATGCTGTT
____________________________________________________________
consensus GAGTTAGTTGATGCTGCCTTCCCTCTTCTTAAAGGTGTTGTTGCTACAACTGATGCTGTT
. : . : . : . : . : . :
JMFF020C17- GAGGCATGCACTGGTGTCAATGTTGCAGTCATGGTTGGTGGTTTCCCAAGGAAAGAAGGC
JMSF006K03- GAGGCATGCACTGGTGTCAATGTTGCAGTCATGGTTGGTGGTTTCCCAAG
JMFS012D08- GAGGCATGCACTGGTGTCAATGTTGCAGTCATGGTTGGTGGTTTCCCAAGGAAAGAAGGC
JMSF045B22- GAGGCATGCACTGGTGTCAATGTTGCAGTCATGGTTGGTGGTTTCCCAAGGAAAGAAGGC
____________________________________________________________
consensus GAGGCATGCACTGGTGTCAATGTTGCAGTCATGGTTGGTGGTTTCCCAAGGAAAGAAGGC
. : . : . : . : . : . :
JMFF020C17- ATGGAGAGGAAAGATGTGATGTCAAAGAATGTCTCTATTTACAAGTCCCAGGCTGCTGCT
JMFS012D08- ATGGAGAGGAAAGATGTGATGTCAAAGAATGTCTCTATTTACAAGTCCCAGGCTGCTGCT
JMSF045B22- ATGGAGAGGAAAGATGTGATGTCAAAGAATGTCTCTATTTACAAGTCCCAGGCTGCTGCT
____________________________________________________________
consensus ATGGAGAGGAAAGATGTGATGTCAAAGAATGTCTCTATTTACAAGTCCCAGGCTGCTGCT
. : . : . : . : . : . :
JMFF020C17- CTTGAGAAGCATGCTGCAGCTAACTGCAAGGTATTGGTTGTTGCTAACCCTGCAAACACC
JMFS012D08- CTTGAGAAGCATGCTGCAGCTAACTGCAAGGTATTGGTTGTTGCTAACCCTGCAAACACC
JMSF045B22- CTTGAGAAGCATGCTGCAGCTAACTGCAAGGTATTGGTTGTTGCTAACCCTGCAAACACC
rJMSF045B22+ CTAACCCTGCAAACACC
rJMFF020C17+ CC
____________________________________________________________
consensus CTTGAGAAGCATGCTGCAGCTAACTGCAAGGTATTGGTTGTTGCTAACCCTGCAAACACC
. : . : . : . : . : . :
JMFF020C17- AATGCATTGATTTTGAAGGAGTTTGCACCATCTATTCCTGAGAAAAACATTACTTG
JMFS012D08- AATGCATTGATTTTGAAGGAGTTTGCACCATCTATTCCTGAGAAAAACATTACTTGTTTG
JMSF045B22- AATGCATTGATTTTGAAGGAGTTTGCACCATCTATTCCTGAGAAAAACATTACTTGTTTG
rJMSF045B22+ AATGCATTGATTTTGAAGGAGTTTGCACCATCTATTCCTGAGAAAAACATTACTTGTTTG
rJMFF020C17+ AATGCATTGATTTTGAAGGAGTTTGCACCATCTATTCCTGAGAAAAACATTACTTGTTTG
____________________________________________________________
consensus AATGCATTGATTTTGAAGGAGTTTGCACCATCTATTCCTGAGAAAAACATTACTTGTTTG
. : . : . : . : . : . :
JMFS012D08- ACAAGATTGGACCATAACAGGGCCCTTGGCCAAATCTCAGAGAGATTGGGTGTTCAAGTC
JMSF045B22- ACAAGATTGGACCATAACAGGGCCCTTGGCCAAATCTCANAGAGATTGGGTGTTCAAGTC
rJMSF045B22+ ACAAGATTGGACCATAACAGGGCCCTTGGCCAAATCTCAGAGAGATTGGGTGTTCAAGTC
rJMFF020C17+ ACAAGATTGGACCATAACAGGGCCCTTGGCCAAATCTCAGAGAGATTGGGTGTTCAAGTC
rJMFF021M12+ AATCTCAGAGAGATTGGGTGTTCAAGTC
____________________________________________________________
consensus ACAAGATTGGACCATAACAGGGCCCTTGGCCAAATCTCAGAGAGATTGGGTGTTCAAGTC
. : . : . : . : . : . :
JMFS012D08- AGTGATGTTAAAAATGTAGTCATTTGGGGAAACCACTCATCTACGCAGTATCCTGATGTT
JMSF045B22- AGTGATGTTAAAAATGTAGTCATTTGGGGAAACCACTCATCTACGCAGTATCCTGATGTT
rJMSF045B22+ AGTGATGTTAAAAATGTAGTCATTTGGGGAAACCACTCATCTACGCAGTATCCTGATGTT
rJMFF031E02+ ATCTACGCAGTATCCTGATGTT
rJMFF020C17+ AGTGATGTTAAAAATGTAGTCATTTGGGGAAACCACTCATCTACGCAGTATCCTGATGTT
rJMFF021M12+ AGTGATGTTAAAAATGTAGTCATTTGGGGAAACCACTCATCTACGCAGTATCCTGATGTT
____________________________________________________________
consensus AGTGATGTTAAAAATGTAGTCATTTGGGGAAACCACTCATCTACGCAGTATCCTGATGTT
. : . : . : . : . : . :
JMFS012D08- AA
JMSF045B22- AATCATGCCACTGTCAAAACACCAGCCGGANAAAAGCCAGTCCGTCAGCTTGTTGGAAA
rJMSF045B22+ AATCATGCCACTGTCAAAACACCAGCCGGAGAAAAGCCAGTCCGTCAGCTTGTTGGAAAT
rJMFF031E02+ AATCATGCCACTGTCAAAACACCAGCCGGAGAAAAGCCAGTCCGTCAGCTTGTTGGAAAT
rJMFF020C17+ AATCATGCCACTGTCAAAACACCAGCCGGAGAAAAGCCAGTCCGTCAGCTTGTTGGAAAT
rJMFF021M12+ AATCATGCCACTGTCAAAACACCAGCCGGAGAAAAGCCAGTCCGTCAGCTTGTTGGAAAT
____________________________________________________________
consensus AATCATGCCACTGTCAAAACACCAGCCGGAGAAAAGCCAGTCCGTCAGCTTGTTGGAAAT
. : . : . : . : . : . :
rJMSF045B22+ GACGAATGGTTGAATGGTGAGTTCATAACCACTGTCCAGCAGCGTGGTGCCGCAATTATC
rJMFF031E02+ GACGAATGGTTGAATGGTGAGTTCATAACCNCTGTCCAGCAGCGTGGTGCCGCAATTATC
rJMFF020C17+ GACGAATGGTTGAATGGTGAGTTCATAACCACTGTCCAGCAGCGTGGTGCCGCAATTATC
rJMFF021M12+ GACGAATGGTTGAATGGTGAGTTCATAACCACTGTCCAGCAGCGTGGTGCCGCAATTATC
____________________________________________________________
consensus GACGAATGGTTGAATGGTGAGTTCATAACCACTGTCCAGCAGCGTGGTGCCGCAATTATC
. : . : . : . : . : . :
rJMSF045B22+ AAGGCTAGAAAATTTTCCAGTGCTCTCTCTGCTGCTAGCTCTGCTTGTGACCACATACGT
rJMFF031E02+ AAGGCTAGAAAATTTTCCAGTGCTCTGTCTGCTGCTAGCTCTGCTTGTGACCACATACGT
rJMFF020C17+ AAGGCTAGAAAATTTTCCAGTGCTCTCTCTGCTGCTAGCTCTGCTTGTGACCACATACGT
rJMFF021M12+ AAGGCTAGAAAATTTTCCAGTGCTCTCTCTGCTGCTAGCTCTGCTTGTGACCACATACGT
____________________________________________________________
consensus AAGGCTAGAAAATTTTCCAGTGCTCTCTCTGCTGCTAGCTCTGCTTGTGACCACATACGT
. : . : . : . : . : . :
rJMSF045B22+ GATTGGGTGGTTGGAACTCCAGAGGGAACTTGGGTGTCCATGGGTGTCTACTCTGATGGC
rJMFF031E02+ GATTGGGTGGTTGGAACTCCAGAGGGAACTTGGGTGTCCATGGGTGTCTACTCTGATGGC
rJMFF020C17+ GATTGGGTGGTTGGAACTCCAGAGGGAACTTGGGTGTCCATGGGTGTCTACTCTGATGGC
rJMFF021M12+ GATTGGGTGGTTGGAACTCCAGAGGGAACTTGGGTGTCCATGGGTGTCTACTCTGATGGC
____________________________________________________________
consensus GATTGGGTGGTTGGAACTCCAGAGGGAACTTGGGTGTCCATGGGTGTCTACTCTGATGGC
. : . : . : . : . : . :
rJMSF006K03+ TTCCCAGTCACTTGCAAAAATGGAGAA
rJMSF045B22+ TCATACAATGTTCCAGCTGGTCTCATCTATTCCTTCCCAGTCACTTGCAAAAATGGAGAA
rJMFF031E02+ TCATACAATGTTCCAGCTGGTCTCATCTATTCCTTCCCAGTCACTTGCAAAAATGGAGAA
rJMFF020C17+ TCATACAATGTTCCAGCTGGTCTCATCTATTCCTTCCCAGTCACTTGCAAAAATGGAGAA
rJMFF021M12+ TCATACAATGTTCCAGCTGGTCTCATCTATTCCTTCCCAGTCACTTGCAAAAATGGAGAA
____________________________________________________________
consensus TCATACAATGTTCCAGCTGGTCTCATCTATTCCTTCCCAGTCACTTGCAAAAATGGAGAA
. : . : . : . : . : . :
rJMSF006K03+ TGGTGTATTGTCCAAGGTCTTCCCATTGATGAGTTTTCAAGAAAGAAGATGGACGCAAC
rJMSF045B22+ TGGTGTATTGTCCAAGGTCTTCCCATTGATGAGTTTTCAAGAAAGAAGATGGACGCAACA
rJMFF031E02+ TGGTGTATTGTNCAAGGTCTTCCCATNGATGAGTTTTCAAGAAAGAAGATGNACGCAACA
rJMFF020C17+ TGGTGTATTGTCCAAGGTCTTCCCATTGATGAGTTTTCAAGAAAGAAGATGGACGCAACA
rJMFF021M12+ TGGTGTATTGTCCAAGGTCTTCCCATTGATGAGTTTTCAAGAAAGAAGATGGACGCAACA
____________________________________________________________
consensus TGGTGTATTGTCCAAGGTCTTCCCATTGATGAGTTTTCAAGAAAGAAGATGGACGCAACA
. : . : . : . : . : . :
rJMSF045B22+ GCTGCAGAACTGTCGGAGGAGAAGGCTTTGGCATACTC
rJMFF031E02+ GCTGCAGAACTGTCGGAGGAGAAGGCTTTNGCATACTCTNGCCTCTNTTAAATTNGGTNT
rJMFF020C17+ GCTGCAGAACTGTCGGAGGAGAAGGCTTTGGCATACTCTTGCCTCTCTTAAATTCGGTTT
rJMFF021M12+ GCTGCAGAACTGTCGGAGGAGAAGGCTTTGGCATACTCTTGCCTCTCTTAAATTCGGTTT
____________________________________________________________
consensus GCTGCAGAACTGTCGGAGGAGAAGGCTTTGGCATACTCTTGCCTCTCTTAAATTCGGTTT
. : . : . : . : . : . :
rJMFF031E02+ GCACACAGCATCTTAGGTCTTTGAGTAGTGTACTTCATCAATNATGAAATAAGTGCGNAT
rJMFF020C17+ GCACACAGCATCTTAGGTCTTTGAGTAGTGTACTTCATCAATTTTGAAATAAGTGCGGAT
rJMFF021M12+ GCACACAGCATCTTAGGTCTTTGAGTAGTGTACTTCATCAATTTTGAAATAAGTGCGGAT
____________________________________________________________
consensus GCACACAGCATCTTAGGTCTTTGAGTAGTGTACTTCATCAATTTTGAAATAAGTGCGGAT
. : . : . : . : . : . :
rJMFF031E02+ ATGTCCCTCCCNNGAAAGTCT
rJMFF020C17+ ATGTCCCTCCCTTGAAAGTCTCTCTTTGACGAGAGATATTCTCCTTTGTAATGAGAAAT
rJMFF021M12+ ATGTCCCTCCCTTGAAAGTCTCTCTTTGACGAGAGATATTCTCCTTTGTAATGAGAAATA
____________________________________________________________
consensus ATGTCCCTCCCTTGAAAGTCTCTCTTTGACGAGAGATATTCTCCTTTGTAATGAGAAATA