Contig 011054:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021I14Sequence606003159 (2)ref|XP_009773751.1|6e-57PREDICTED: wall-associated receptor kinase-like 1 [Nicotiana sylvestris]748011054 (2)ref|XP_009627286.1|8e-55PREDICTED: wall-associated receptor kinase-like 1 [Nicotiana tomentosiformis]
JMSF021K06Sequence686003159 (2)ref|XP_010317039.1|2e-65PREDICTED: wall-associated receptor kinase-like 1 [Solanum lycopersicum]779011054 (2)gb|KDP41423.1|1e-83hypothetical protein JCGZ_15830 [Jatropha curcas]

Alignment

This contig is upended


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rJMSF021K06+                                  TTGCGACAGAGGTAGCTGATGCTTTGGCTTATCTGC
                      ____________________________________________________________
consensus                                     TTGCGACAGAGGTAGCTGATGCTTTGGCTTATCTGC
 
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rJMSF021K06+          ATTCGTCGTCCTCCATTCCCATCTTACATCGCGACATCAAGTCCAGCAATATCCTTCTGG
rJMFF021I14+                                          GACATCAAGTCCAGCAATATCCTTCTGG
                      ____________________________________________________________
consensus             ATTCGTCGTCCTCCATTCCCATCTTACATCGCGACATCAAGTCCAGCAATATCCTTCTGG
 
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rJMSF021K06+          ACGAGAAGTACCGAGCTAAAGTGTCAGATTTTGGAACTTCGAAGA-CCATTGCCATTGAT
rJMFF021I14+          ACGAGAAGTACCGAGCTAAAGTGTCAGATTTTGGAACTTCGAAGACCCATTGCCATTGAT
                      ____________________________________________________________
consensus             ACGAGAAGTACCGAGCTAAAGTGTCAGATTTTGGAACTTCGAAGACCCATTGCCATTGAT
 
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rJMSF021K06+          CAGACTCACGTCACTACTCAAGTGAAAGGAACGTTTGGCTACTTGGATCCTGAGTATTTT
rJMFF021I14+          CAGACTCACGTCACTACTCAAGTGAAAGGAACGTTTGGCTACTTGGATCCTGAGTATTTT
                      ____________________________________________________________
consensus             CAGACTCACGTCACTACTCAAGTGAAAGGAACGTTTGGCTACTTGGATCCTGAGTATTTT
 
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rJMSF021K06+          CAATCCAGTCAATTTACTGAAAAGAGTGACGTCTATAGTTTCGGAGTCGTATTGGTTGAA
rJMFF021I14+          CAATCCAGTCAATTTACTGAAAAGAGTGACGTCTATAGTTTCGGAGTCGTATTGGTTGAA
                      ____________________________________________________________
consensus             CAATCCAGTCAATTTACTGAAAAGAGTGACGTCTATAGTTTCGGAGTCGTATTGGTTGAA
 
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rJMSF021K06+          CTTATGACAGGAAACAAGGCAATTTCTTTTGCGACAAATGAAGAAGACAGAAGTCTTGCC
rJMFF021I14+          CTTATGACAGGAAACAAGGCAATTTCTTTTGCGACAAATGAAGAAGACAGAAGTCTTGCC
                      ____________________________________________________________
consensus             CTTATGACAGGAAACAAGGCAATTTCTTTTGCGACAAATGAAGAAGACAGAAGTCTTGCC
 
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rJMSF021K06+          ACACGATTCCTTTCGGCTATGGAGGGGAATCGACTCTTCAAGATTTTTGACAAACAAGTG
rJMFF021I14+          ACACGATTCCTTTCGGCTATGGAGGGGAATCGACTCTTCAAGATTTTTGACAAACAAGTG
                      ____________________________________________________________
consensus             ACACGATTCCTTTCGGCTATGGAGGGGAATCGACTCTTCAAGATTTTTGACAAACAAGTG
 
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rJMSF021K06+          TTGGAACAAGGCAAAAAGGAAGATCTCATGGTAGTTGCAAACCTTAGTAGGAGATGCTTG
rJMFF021I14+          TTGGAACAAGGCAAAAAGGAAGATCTCATGGTAGTTGCAAACCTTAGTAGGAGATGCTTG
                      ____________________________________________________________
consensus             TTGGAACAAGGCAAAAAGGAAGATCTCATGGTAGTTGCAAACCTTAGTAGGAGATGCTTG
 
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rJMSF021K06+          GACTTGAATGGGAAAAAGAGGCCGACCATGAAAGAAGTGGTATCAGAACTAGAAAAGGTT
rJMFF021I14+          GACTTGAATGGGAAAAAGAGGCCGACCATGAAAGAAGTGGTATCAGAACTAGAAAAGGTT
                      ____________________________________________________________
consensus             GACTTGAATGGGAAAAAGAGGCCGACCATGAAAGAAGTGGTATCAGAACTAGAAAAGGTT
 
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rJMSF021K06+          AAATCTGGCACAACTTCATCCGAGACAAAGAATTTTGAGGGCAAAAGATTATTGGAGATT
rJMFF021I14+          AAATCTGGCACAACTTCATCCGAGACAAAGAATTTTGAGGGCAAAAGATTATTGGAGATT
                      ____________________________________________________________
consensus             AAATCTGGCACAACTTCATCCGAGACAAAGAATTTTGAGGGCAAAAGATTATTGGAGATT
 
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rJMSF021K06+          GAACCAACGATATTTTCTGAAACTAATTATACATGGACAACCACAGAGGAAAATTGCAGT
rJMFF021I14+          GAACCAACGATATTTTCTGAAACTAATTATACATGGACAACCACAGAGGAAAATTGCAGT
                      ____________________________________________________________
consensus             GAACCAACGATATTTTCTGAAACTAATTATACATGGACAACCACAGAGGAAAATTGCAGT
 
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rJMSF021K06+          ACTACATCACTAGACGCACACCCGTTATTGTTTGATACATAAACTGTGACATTGTTTAAT
rJMFF021I14+          ACTACATCACTAGACGCACACCCGTTATTGTTTGATACATAAACTGTGACATTGTTTAAT
                      ____________________________________________________________
consensus             ACTACATCACTAGACGCACACCCGTTATTGTTTGATACATAAACTGTGACATTGTTTAAT
 
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rJMSF021K06+          TAATAGTATTTTTGACATGCATTATATAACTTTATGTTGTTGTTGTTAAACTAGTATTTG
rJMFF021I14+          TAATAGTATTTTTGACATGCATTATATAACTTTATGTTGTTGTTGTTAAACTAGTATTTG
                      ____________________________________________________________
consensus             TAATAGTATTTTTGACATGCATTATATAACTTTATGTTGTTGTTGTTAAACTAGTATTTG
 
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rJMSF021K06+          TCCCGTGCGATGCAC                                             
rJMFF021I14+          TCCCGTGCGATGCACGAGAAATATGTTATAAAAATATACCTTATATGAGGTTTATTCATA
                      ____________________________________________________________
consensus             TCCCGTGCGATGCACGAGAAATATGTTATAAAAATATACCTTATATGAGGTTTATTCATA