Contig 011051:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021B09Sequence497011051 (2)emb|CAG25780.1|2e-16Mob1-like protein [Medicago falcata] emb|CAG25782.1| Mob1-like protein [Medicago714011051 (2)ref|XP_010090141.1|4e-117hypothetical protein L484_027373 [Morus notabilis] gb|EXB38938.1| hypothetical p

Alignment

This contig is upended


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JMFF021B09-                                                                    AAA
                      ____________________________________________________________
consensus                                                                      AAA
 
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JMFF021B09-           TAGGCAGCGGCGTGGAGTTGGAGGTGAGGGGAAGCCAGGTTGGCTGAGCGATGGCAGAGC
                      ____________________________________________________________
consensus             TAGGCAGCGGCGTGGAGTTGGAGGTGAGGGGAAGCCAGGTTGGCTGAGCGATGGCAGAGC
 
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JMFF021B09-           AAGAAGACGGCCTGTCTCTTAGCTTGCTACTCTTTCTTTCTTTGGCTTATTCTTCTTCCA
                      ____________________________________________________________
consensus             AAGAAGACGGCCTGTCTCTTAGCTTGCTACTCTTTCTTTCTTTGGCTTATTCTTCTTCCA
 
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JMFF021B09-           TTTACAACTTTTATATACAAAATACATACAGAGTCGTCTCTGTTGCTGTGATGTTGTCCT
                      ____________________________________________________________
consensus             TTTACAACTTTTATATACAAAATACATACAGAGTCGTCTCTGTTGCTGTGATGTTGTCCT
 
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JMFF021B09-           GCTTCAACTCCCCTTTGCCTTGCCAGTCTGTCATCTCTCCCGCATTCTCCCCAACCACTC
                      ____________________________________________________________
consensus             GCTTCAACTCCCCTTTGCCTTGCCAGTCTGTCATCTCTCCCGCATTCTCCCCAACCACTC
 
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JMFF021B09-           ACCCACCCACCCACCACCCTCAAACACAAATATATGAACACCCTTTCCTTCTGCAACATA
                      ____________________________________________________________
consensus             ACCCACCCACCCACCACCCTCAAACACAAATATATGAACACCCTTTCCTTCTGCAACATA
 
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JMFF021B09-           TATGCGTATGTGTACAAGCTCGACAAACCCTTTGATCCTCAATCATGAGTCTTCTTGGCC
                      ____________________________________________________________
consensus             TATGCGTATGTGTACAAGCTCGACAAACCCTTTGATCCTCAATCATGAGTCTTCTTGGCC
 
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JMFF021B09-           TTGCAAGCAGAAACCAGAAGACATTTCATCCTAAGAAGAGTGTTCCACCAGGAAACAAGG
                      ____________________________________________________________
consensus             TTGCAAGCAGAAACCAGAAGACATTTCATCCTAAGAAGAGTGTTCCACCAGGAAACAAGG
 
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JMFF021B09-           GTGAACTACTCCAGAAACATATTGATGCCACCTTGGGGAGTGGCAATTTGAGGGAAGCAG
rJMFF021B09+                TACTCCAGAAACATATTGATGCCACCTTGGGGAGTGGCAATTTGAGGGAAGCAG
                      ____________________________________________________________
consensus             GTGAACTACTCCAGAAACATATTGATGCCACCTTGGGGAGTGGCAATTTGAGGGAAGCAG
 
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JMFF021B09-           TGCTGCTGCCAGCA                                              
rJMFF021B09+          TGCTGCTGCCAGCAGGGGAAGATCTTAATGAGTGGTTGGCTGTAAATACTGTTGACTTCT
                      ____________________________________________________________
consensus             TGCTGCTGCCAGCAGGGGAAGATCTTAATGAGTGGTTGGCTGTAAATACTGTTGACTTCT
 
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rJMFF021B09+          TTAACCAGGTGAATATATTGTATGGCACTCTCACTGAGTTCTGCACCCCATCAAGTTGTC
                      ____________________________________________________________
consensus             TTAACCAGGTGAATATATTGTATGGCACTCTCACTGAGTTCTGCACCCCATCAAGTTGTC
 
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rJMFF021B09+          CAATGATGACTGCAGGACCAAAGTACGAGTGCCTTTGGGCAGATGGAGTGACTATAAAGA
                      ____________________________________________________________
consensus             CAATGATGACTGCAGGACCAAAGTACGAGTGCCTTTGGGCAGATGGAGTGACTATAAAGA
 
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rJMFF021B09+          AACCCATAAAAGTTTCTGCTCCAAAATATGTTGATTATTTGATGGATTGGATTGAAAAAC
                      ____________________________________________________________
consensus             AACCCATAAAAGTTTCTGCTCCAAAATATGTTGATTATTTGATGGATTGGATTGAAAAAC
 
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rJMFF021B09+          AGCTGGATGATGAATCAATATTTCCCCAAAAGTTCGGTGCTCCATTTCCACCAAACTTTG
                      ____________________________________________________________
consensus             AGCTGGATGATGAATCAATATTTCCCCAAAAGTTCGGTGCTCCATTTCCACCAAACTTTG
 
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rJMFF021B09+          AGGACGTTGTGAAGACGATAGTTAAGAGACTGTTCCGTGTGTATGCTCATATCTACCACT
                      ____________________________________________________________
consensus             AGGACGTTGTGAAGACGATAGTTAAGAGACTGTTCCGTGTGTATGCTCATATCTACCACT
 
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rJMFF021B09+          CGCATTTCCAGAAGATCATTGGTTTGAAGGAAGAAGCTCATCTTAATACTTGCTTCAAAC
                      ____________________________________________________________
consensus             CGCATTTCCAGAAGATCATTGGTTTGAAGGAAGAAGCTCATCTTAATACTTGCTTCAAAC
 
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rJMFF021B09+          ATTTTGTTATGTTCTCATGGGAGTTTCACTTGATTGACAAGAATGGAGTTGCACCTCTGT
                      ____________________________________________________________
consensus             ATTTTGTTATGTTCTCATGGGAGTTTCACTTGATTGACAAGAATGGAGTTGCACCTCTGT
 
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rJMFF021B09+          ACGAGATTGTTGAATCCATTTTGCAGTTGTAGGGTAGAATCCTGCTAATTTTCATTCCAT
                      ____________________________________________________________
consensus             ACGAGATTGTTGAATCCATTTTGCAGTTGTAGGGTAGAATCCTGCTAATTTTCATTCCAT
 
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rJMFF021B09+          TCCATTCCATTCATTTTTATAATTCTTTGATTAGCTTCTCTGTAAATAGAATGATCTGAA
                      ____________________________________________________________
consensus             TCCATTCCATTCATTTTTATAATTCTTTGATTAGCTTCTCTGTAAATAGAATGATCTGAA
 
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rJMFF021B09+          ATTCATGCTTTCTACATTTTTCTTCTTCTTATTAAAAGGGTACCATGTTTAACCTTNTAA
                      ____________________________________________________________
consensus             ATTCATGCTTTCTACATTTTTCTTCTTCTTATTAAAAGGGTACCATGTTTAACCTTNTAA