Contig 011049:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF024N11+                      TGTTCATTTTGNCTCCATAGGCAANTGCCTTNTCNGGNGACTCTTGGG
                      ____________________________________________________________
consensus                         TGTTCATTTTGNCTCCATAGGCAANTGCCTTNTCNGGNGACTCTTGGG
 
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rJMSF024N11+          ATTTCCAAGATGAAAGAGNTAAGATGTAGGGAGTGAGTTTTTGGGGAGTAGCAGAAGTAN
                      ____________________________________________________________
consensus             ATTTCCAAGATGAAAGAGNTAAGATGTAGGGAGTGAGTTTTTGGGGAGTAGCAGAAGTAN
 
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rJMSF024N11+          GTGCTGTTGCTTTTTCCAAAGCTGAAGCAACTGGAGTTCCATCATTGTCCAGAGTGGGAG
rJMFF020M20+                                                             GAGTGGGAG
                      ____________________________________________________________
consensus             GTGCTGTTGCTTTTTCCAAAGCTGAAGCAACTGGAGTTCCATCATTGTCCAGAGTGGGAG
 
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rJMSF024N11+          GAGTGGGAAGACTTCAAAGAAGAAGCAACAATAATAATAATGCCATGCATCAAGGAGCTG
rJMFF020M20+          GAGTGGGAAGACTTCAAAGAAGAAGCACCAATAATAATAATGCCATGCATCAGGGAGTTG
                      ____________________________________________________________
consensus             GAGTGGGAAGACTTCAAAGAAGAAGCACCAATAATAATAATGCCATGCATCAGGGAGTTG
 
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rJMSF024N11+          GTTCTAGAAGATTGCGGAAAACTTAAGACAGTGCCACAATACCTCTTAAGTAGGCTGGAG
rJMFF020M20+          GTACTAAAAAATTGCGAAAAACTTAAGACAGTGCCACATCACCTCTTAAGTAAGCTGGAG
                      ____________________________________________________________
consensus             GTTCTAGAAGATTGCGGAAAACTTAAGACAGTGCCACATTACCTCTTAAGTAGGCTGGAG
 
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rJMSF024N11+          TATTTGATGATTAACAACTGTCCGGTAGTCACTGTGGGAGTAGAT---------GCTCTG
rJMFF020M20+          TGTTTGGAGATTGAAGCCTGTCCGGGAGTCAGTGTGGGAATAGATGCGATGGAAGCTCTA
                      ____________________________________________________________
consensus             TGTTTGGTGATTGACGCCTGTCCGGTAGTCAGTGTGGGAGTAGATGCGATGGAAGCTCTG
 
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rJMSF024N11+          AAACCACCTCTGGAACTGCAAACCTTGGAACTTAAATGCTACAGAGGAACCCACTTCCCT
rJMFF020M20+          AAACCACCTCCGGAACTGCAAGACTTGTACTTTCTTGGGTACAAAGGAACACGCTTACCT
                      ____________________________________________________________
consensus             AAACCACCTCTGGAACTGCAAGCCTTGTACTTTCTTTGGTACAGAGGAACCCGCTTCCCT
 
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rJMSF024N11+          TCCTGGATTACACTATCCCTTGATAATCTACGGATTCTTGTAATCGGTGAGTACTTAAAT
rJMFF020M20+          TCCTGGATTACACTGTCCCTTGATAATCTACGACTTCTTAGTATCGGGTGCTGCTCTAAT
                      ____________________________________________________________
consensus             TCCTGGATTACACTGTCCCTTGATAATCTACGGCTTCTTGTTATCGGTTGGTGCTTTAAT
 
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rJMSF024N11+          TGTTCATCTTTGCCTCCATTAGGCAAACTCCCTTCTCTGGAGACTCTTTTCATAGACAAC
rJMFF020M20+          TGTTCATCTTTGCCTCCAGTAGGCAAACTCCCTTCTCTGGAGACTCTTTGGATAGGGGAA
                      ____________________________________________________________
consensus             TGTTCATCTTTGCCTCCATTAGGCAAACTCCCTTCTCTGGAGACTCTTTTGATAGGGGAC
 
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rJMSF024N11+          ATGGAAGAGCTAAGATATGTAGGGAGTGAGTTTTTGGGAGTAGCAGAAGTAGGTGCTGTT
rJMFF020M20+          ATGAAAGAGCTAAGATATGTAGGTAGTGAGTTTTTGGGAGTAGCAGAAGTAGGTGGTGTT
                      ____________________________________________________________
consensus             ATGGAAGAGCTAAGATATGTAGGTAGTGAGTTTTTGGGAGTAGCAGAAGTAGGTGGTGTT
 
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rJMSF024N11+          GCTTTTCCAAAGCTGAAGAAATTGAGCTTCTTCATGTGTACAGAGTGGGAGGAGTGGGAA
rJMFF020M20+          GCTTTTCCAAAGCTGAAGAAACTAGAGTTCTCGAATTGTCCCGAGTGGGAAGAGTGGGAA
                      ____________________________________________________________
consensus             GCTTTTCCAAAGCTGAAGAAATTGGGGTTCTTGATTTGTCCCGAGTGGGAGGAGTGGGAA
 
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rJMSF024N11+          GACTTCAAAGAAGAAGCAACAATAGTAATAATGCCATGCATCAGGGAGTTGCAACTAATA
rJMFF020M20+          GACTTCAAAGAAGAAGCAATAATAATAATAATGCCATGCATTAGGGAGTTGGAACTAAAA
                      ____________________________________________________________
consensus             GACTTCAAAGAAGAAGCAATAATAGTAATAATGCCATGCATTAGGGAGTTGGAACTAATA
 
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rJMSF024N11+          TTTTGCGAAAAACTT-AAGACAGTGCCACATCACCTCTTAAGTAGGCTGGAGTCTTTGA 
rJMFF020M20+          AATTGCAAAAAACTTAAAGACAGTGCCATATCACCTCTTAAGTAGGCTGGAGTCTTTGAA
                      ____________________________________________________________
consensus             TTTTGCGAAAAACTTAAAGACAGTGCCATATCACCTCTTAAGTAGGCTGGAGTCTTTGAA
 
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rJMFF020M20+          GATCTACAAGTGCCCGAGTCTCAAAGTTGAATAGATCGAGTGAAATATGTGACACTCCAG
                      ____________________________________________________________
consensus             GATCTACAAGTGCCCGAGTCTCAAAGTTGAATAGATCGAGTGAAATATGTGACACTCCAG
 
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rJMFF020M20+          ATGCCGATTAAGTGTCAAAATGGTGACGTCATTGTGTTTCTAGGTAAGGCCGCTGCTCCA
                      ____________________________________________________________
consensus             ATGCCGATTAAGTGTCAAAATGGTGACGTCATTGTGTTTCTAGGTAAGGCCGCTGCTCCA
 
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rJMFF020M20+          ATCCTACTGGATGAGAGTCCTACGTACTTGTAATGTTATGGTTACCAAGTTAATAGTCTA
                      ____________________________________________________________
consensus             ATCCTACTGGATGAGAGTCCTACGTACTTGTAATGTTATGGTTACCAAGTTAATAGTCTA