| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018M08 | Sequence | 510 | 011043 (6) | ref|XP_009786328.1| | 131 | PREDICTED: uncharacterized protein LOC104234463 [Nicotiana sylvestris] | 711 | 011043 (6) | ref|XP_009786328.1| | 115 | PREDICTED: uncharacterized protein LOC104234463 [Nicotiana sylvestris] |
| JMFF019N15 | Sequence | 591 | 011043 (6) | ref|XP_009786328.1| | 132 | PREDICTED: uncharacterized protein LOC104234463 [Nicotiana sylvestris] | 748 | 011043 (6) | ref|XP_009786328.1| | 127 | PREDICTED: uncharacterized protein LOC104234463 [Nicotiana sylvestris] |
| JMFF030C24 | Sequence | 526 | 011043 (6) | ref|XP_009786328.1| | 102 | PREDICTED: uncharacterized protein LOC104234463 [Nicotiana sylvestris] | 665 | 011043 (6) | ref|XP_009595873.1| | 94.4 | PREDICTED: uncharacterized protein LOC104092087 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF030C24- GATTTCTTGTAAACAA
JMFF019N15- GATTTCTTGTAAACAA
____________________________________________________________
consensus GATTTCTTGTAAACAA
. : . : . : . : . : . :
JMFF030C24- CGCCGAAAAGATCACAAGATATCCGTCCCGGCATCGTCTTCTTCACTTCTTCTCCCTCAC
JMFF018M08- AC
JMFF019N15- CGCCGAAAAGATCACAAGATATCCGTCCCGGCATCGTCTTCTTCACTTCTTCTCCCTCAC
____________________________________________________________
consensus CGCCGAAAAGATCACAAGATATCCGTCCCGGCATCGTCTTCTTCACTTCTTCTCCCTCAC
. : . : . : . : . : . :
JMFF030C24- TCTGAATCGGCTTTTTGACAAACCCCTCTTTCTCACCTCAACTTCCGACAAAATAATGGC
JMFF018M08- TCTGAATCGGCTTTTTGACAAACCCCTCTTTCTCACCTCAACTTCCGACAAAATAATGGC
JMFF019N15- TCTGAATCGGCTTTTTGACAAACCCCTCTTTCTCACCTCAACTTCCGACAAAATAATGGC
____________________________________________________________
consensus TCTGAATCGGCTTTTTGACAAACCCCTCTTTCTCACCTCAACTTCCGACAAAATAATGGC
. : . : . : . : . : . :
JMFF030C24- GATGGCTCTATCCAACTCACTGGTTCTATCCAAATCCAAGCCACTGCATTTATCCTCTGG
JMFF018M08- GATGGCTCTATCCAACTCACTGGTTCTATCCAAATCCAAGCCACTGCATTTATCCTCTGG
JMFF019N15- GATGGCTCTATCCAACTCACTGGTTCTATCCAAATCCAAGCCACTGCATTTATCCTCTGG
rJMFF019N15+ AATCCAAGCCACTGCATTTATCCTCTGG
____________________________________________________________
consensus GATGGCTCTATCCAACTCACTGGTTCTATCCAAATCCAAGCCACTGCATTTATCCTCTGG
. : . : . : . : . : . :
JMFF030C24- CTTTTGTCTGAAGTCAGTTGACCAAAGTGTGTGTCCCACCACATTGTCTTTTAATCCTAG
JMFF018M08- CTTTTGTCTGAAGTCAGTTGACCAAAGTGTGTGTCCCACCACATTGTCTTTTAATCCTAG
JMFF019N15- CTTTTGTCTGAAGTCAGTTGACCAAAGTGTGTGTCCCACCACATTGTCTTTTAATCCTAG
rJMFF030C24+ TAG
rJMFF018M08+ CTGAAGTCAGTTGACCAAAGTGTGTGTCCCACCACATTGTCTTTTAATCCTAG
rJMFF019N15+ CTTTTGTCTGAAGTCAGTTGACCAAAGTGTGTGTCCCACCACATTGTCTTTTAATCCTAG
____________________________________________________________
consensus CTTTTGTCTGAAGTCAGTTGACCAAAGTGTGTGTCCCACCACATTGTCTTTTAATCCTAG
. : . : . : . : . : . :
JMFF030C24- GCGTGCCAGAAACTCGTCTGTATCGGGAAGTTCATTTGTTGTTCAAGCAAAATATAGTGA
JMFF018M08- GCGTGCCAGAAACTCGTCTGTATCGGGAAGTTCATTTGTTGTTCAAGCAAAATATAGTGA
JMFF019N15- GCGTGCCAGAAACTCGTCTGTATCGGGAAGTTCATTTGTTGTTCAAGCAAAATATAGTGA
rJMFF030C24+ GCGTGCCAGAAACTCGTCTGTATCGGGAAGTTCATTTGTTGTTCAAGCAAAATATAGTGA
rJMFF018M08+ GCGTGCCAGAAACTCGTCTGTATCGGGAAGTTCATTTGTTGTTCAAGCAAAATATAGTGA
rJMFF019N15+ GCGTGCCAGAAACTCGTCTGTATCGGGAAGTTCATTTGTTGTTCAAGCAAAATATAGTGA
____________________________________________________________
consensus GCGTGCCAGAAACTCGTCTGTATCGGGAAGTTCATTTGTTGTTCAAGCAAAATATAGTGA
. : . : . : . : . : . :
JMFF030C24- AAGTGATGGTGGGAACTCAACCGCATTTGTTGGTGGCTTCATTTTGGGAGGATTAATTGT
JMFF018M08- AAGTGATGGTGGGAACTCAACCGCATTTGTTGGTGGCTTCATTTTGGGAGGATTAATTGT
JMFF019N15- AAGTGATGGTGGGAACTCAACCGCATTTGTTGGTGGCTTCATTTTGGGAGGATTAATTGT
rJMFF030C24+ AAGTGATGGTGGGAACTCAACCGCATTTGTTGGTGGCTTCATTTTGGGAGGATTAATTGT
rJMFF018M08+ AAGTGATGGTGGGAACTCAACCGCATTTGTTGGTGGCTTCATTTTGGGAGGATTAATTGT
rJMFF019N15+ AAGTGATGGTGGGAACTCAACCGCATTTGTTGGTGGCTTCATTTTGGGAGGATTAATTGT
____________________________________________________________
consensus AAGTGATGGTGGGAACTCAACCGCATTTGTTGGTGGCTTCATTTTGGGAGGATTAATTGT
. : . : . : . : . : . :
JMFF030C24- CGGTACACTTGGTTGTGTCTTCGCACCGCAGATCAGTTATGCATTAGCCGGAGCTGATAA
JMFF018M08- CGGTACACTTGGTTGTGTCTTCGCACCGCAGATCAGTTATGCATTAGCCGGAGCTGATAA
JMFF019N15- CGGTACACTTGGTTGTGTCTTCGCACCGCAGATCAGTTATGCATTAGCCGGAGCTGATAA
rJMFF030C24+ CGGTACACTTGGTTGTGTCTTCGCACCGCAGATCAGTTATGCATTAGCCGGAGCTGATAA
rJMFF018M08+ CGGTACACTTGGTTGTGTCTTCGCACCGCAGATCAGTTATGCATTAGCCGGAGCTGATAA
rJMFF019N15+ CGGTACACTTGGTTGTGTCTTCGCACCGCAGATCAGTTATGCATTAGCCGGAGCTGATAA
____________________________________________________________
consensus CGGTACACTTGGTTGTGTCTTCGCACCGCAGATCAGTTATGCATTAGCCGGAGCTGATAA
. : . : . : . : . : . :
JMFF030C24- GATTGATAAGAAAGACCTAATGAAGAAATTGCCAAAGTTCATATATGATGAAGAAAAAGT
JMFF018M08- GATTGATAAGAAAGACCTAATGAAGAAATTGCCAAAGTTCATATATGATGAAGAAAAAGT
JMFF019N15- GATTGATAAGAAAGACCTAATGAAGAAATTGCCAAAGTTCATATATGATGAAGAAAAAGT
rJMFF030C24+ GATTGATAAGAAAGACCTAATGAAGAAATTGCCAAAGTTCATATATGATGAAGAAAAAGT
rJMFF018M08+ GATTGATAAGAAAGACCTAATGAAGAAATTGCCAAAGTTCATATATGATGAAGAAAAAGT
rJMFF019N15+ GATTGATAAGAAAGACCTAATGAAGAAATTGCCAAAGTTCATATATGATGAAGAAAAAGT
____________________________________________________________
consensus GATTGATAAGAAAGACCTAATGAAGAAATTGCCAAAGTTCATATATGATGAAGAAAAAGT
. : . : . : . : . : . :
JMFF030C24- GCTTGAAAGACAACGCAAGAAACTGGCAGA
JMFF018M08- GCTTGAAAGACAACGCAAGAAACTGGCAGAGAAGATTGAACAGCTTAACACTGCTATAGA
JMFF019N15- GCTTGAAAGACAACGCAAGAAACTGGCAGAGAAGATTGAACAGCTTAACACTGCTATAGA
rJMFF030C24+ GCTTGAAAGACAACGCAAGAAACTGGCAGAGAAGATTGAACAGCTTAACACTGCTATAGA
rJMFF018M08+ GCTTGAAAGACAACGCAAGAAACTGGCAGAGAAGATTGAACAGCTTAACACTGCTATAGA
rJMFF019N15+ GCTTGAAAGACAACGCAAGAAACTGGCAGAGAAGATTGAACAGCTTAACACTGCTATAGA
____________________________________________________________
consensus GCTTGAAAGACAACGCAAGAAACTGGCAGAGAAGATTGAACAGCTTAACACTGCTATAGA
. : . : . : . : . : . :
JMFF018M08- CGACATTTCTTCCCAGATGAAGCACGGC
JMFF019N15- CGACATTTCTTCCCAGATGAAGCACGGCGACAGCC
rJMFF030C24+ CGACATTTCTTCCCAGATGAAGCACGGCGACAGCCAGGATGAACCAGTAGTGAACTCTGA
rJMFF018M08+ CGACATTTCTTCCCAGATGAAGCACGGCGACAGCCAGGATGAACCAGTAGTGAACTCTGA
rJMFF019N15+ CGACATTTCTTCCCAGATGAAGCACGGCGACAGCCAGGATGAACCAGTAGTGAACTCTGA
____________________________________________________________
consensus CGACATTTCTTCCCAGATGAAGCACGGCGACAGCCAGGATGAACCAGTAGTGAACTCTGA
. : . : . : . : . : . :
rJMFF030C24+ AGTCGGAGCTGAAGTTGGTTTATAAGAACGCTTTTAGTGGTTTTTACACATTACAGAAGA
rJMFF018M08+ AGTCGGAGCTGAAGTTGGTTTATAAGAACGCTTTTAGTGGTTTTTACACATTACAGAAGA
rJMFF019N15+ AGTCGGAGCTGAAGTTGGTTTATAAGAACGCTTTTAGTGGTTTTTACACATTACAGAAGA
____________________________________________________________
consensus AGTCGGAGCTGAAGTTGGTTTATAAGAACGCTTTTAGTGGTTTTTACACATTACAGAAGA
. : . : . : . : . : . :
rJMFF030C24+ CATCAACTTCGTTCTTAGCCTAGAAGTTCTTGAGGGGTGATGAAATTGATCCAACTTTTC
rJMFF018M08+ CATCAACTTCGTTCTTAGCCTAGAAGTTCTTGAGGGGTGATGAAATTGATCCAACTTTTC
rJMFF019N15+ CATCAACTTCGTTCTTAGCCTAGAAGTTCTTGAGGGGTGATGAAATTGATCCAACTTTTC
____________________________________________________________
consensus CATCAACTTCGTTCTTAGCCTAGAAGTTCTTGAGGGGTGATGAAATTGATCCAACTTTTC
. : . : . : . : . : . :
rJMFF030C24+ ACTAGTGTCAATGTGTCATTGGTCCTTACTATCACATACTTTCTAAATTCAGGAATAAAA
rJMFF018M08+ ACTAGTGTCAATGTGTCATTGGTCCTTACTATCACATACTTTCTAAATTCAGGAATAAAA
rJMFF019N15+ ACTAGTGTCAATGTGTCATTGGTCCTTACTATCACATACTTTCTAAATTCAGGAATAAAA
____________________________________________________________
consensus ACTAGTGTCAATGTGTCATTGGTCCTTACTATCACATACTTTCTAAATTCAGGAATAAAA
. : . : . : . : . : . :
rJMFF030C24+ TGTAAATTTCATCCCCTTCAAATTTTTCTGCTTTATGACTACACTGGTTGCTGCTTTGAA
rJMFF018M08+ TGTAAATTTCATCCCCTTCAAATTTTTCTGCTTTATGACTACACTGGTTGCTGCTTTGAA
rJMFF019N15+ TGTAAATTTCATCCCCTTCAAATTTTTCTGCTTTATGACTACACTGGTTGCTGCTTTGAA
____________________________________________________________
consensus TGTAAATTTCATCCCCTTCAAATTTTTCTGCTTTATGACTACACTGGTTGCTGCTTTGAA
. : . : . : . : . : . :
rJMFF030C24+ CTCTTGAGCACTTGTAATGCTGCTATATGTTGTACTTTCGTTTGGTTCACAAAGAAAT
rJMFF018M08+ CTCTTGAGCACTTGTAATGCTGCTATATGTTGTACTTTCGTTTGGTTCACAAAGAAAT
rJMFF019N15+ CTCTTGAGCACTTGTAATGCTGCTATATGTTGTACTTTCGTTTGGTTCACAAAGAAATTT
____________________________________________________________
consensus CTCTTGAGCACTTGTAATGCTGCTATATGTTGTACTTTCGTTTGGTTCACAAAGAAATTT