Contig 011040:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF048D08+                                     GCTCGGTACAGAAAATCATAAATGAGATGGTGA
                      ____________________________________________________________
consensus                                        GCTCGGTACAGAAAATCATAAATGAGATGGTGA
 
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rJMSF048D08+          TGTCTTCACAACTTGGTGGAGGTGGTATGATAGGAGCTGGCACAATTGGGAATGACATGA
                      ____________________________________________________________
consensus             TGTCTTCACAACTTGGTGGAGGTGGTATGATAGGAGCTGGCACAATTGGGAATGACATGA
 
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rJMSF048D08+          AAAATGGAAATGCGATGTTGGCAACAAACAATAATTCTGTCCTTAATGGCAGCAATTACC
rJMFF019D05+                                                GTCCTTAATGGCAGCAATTACC
                      ____________________________________________________________
consensus             AAAATGGAAATGCGATGTTGGCAACAAACAATAATTCTGTCCTTAATGGCAGCAATTACC
 
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rJMSF048D08+          TTGTTGGGAGTGGCACTGTGAATGCAAATACAGGCATTGGAGGTGTGGGATTCAGGAATA
rJMFF019D05+          TTGTTGGGAGTGGCACTGTGAATGCAAATACAGGCATTGGAGGTGTGGGATTCAGGAATA
                      ____________________________________________________________
consensus             TTGTTGGGAGTGGCACTGTGAATGCAAATACAGGCATTGGAGGTGTGGGATTCAGGAATA
 
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rJMSF048D08+          TGGGCAACGGACGAAGTGGATTGGGCAATAACCCTGTAATAATGAATGGAAGAGTAGGCA
rJMFF019D05+          TGGGCAACGGACGAAGTGGATTGGGCAATAACCCTGTAATAATGAATGGAAGAGTAGGCA
                      ____________________________________________________________
consensus             TGGGCAACGGACGAAGTGGATTGGGCAATAACCCTGTAATAATGAATGGAAGAGTAGGCA
 
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rJMSF048D08+          TGTCAATGGCACGAGACCAGAGTGTGAACCAGCAGCCGCAACAAGATCTGGGAAACCAAC
rJMFF019D05+          TGTCAATGGCACGAGACCAGAGTGTGAACCAGCAGCCGCAACAAGATCTGGGAAACCAAC
                      ____________________________________________________________
consensus             TGTCAATGGCACGAGACCAGAGTGTGAACCAGCAGCCGCAACAAGATCTGGGAAACCAAC
 
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rJMSF048D08+          TGCTCAATGGTCTTGGTGCAGCCAATGGTTTCAACAATCTTCCATTTGATTGGAAAACTT
rJMFF019D05+          TGCTCAATGGTCTTGGTGCAGCCAATGGTTTCAACAATCTTCCATTTGATTGGAAAACTT
                      ____________________________________________________________
consensus             TGCTCAATGGTCTTGGTGCAGCCAATGGTTTCAACAATCTTCCATTTGATTGGAAAACTT
 
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rJMSF048D08+          CTCCTTAAAGGCTGTGTTTCTGATGTGAGTCCAATCACTCCTGCAGGCAGCATAGAAAAT
rJMFF019D05+          CTCCTTAAAGGCTGTGTTTCTGATGTGAGTCCAATCACTCCTGCAGGCAGCATAGAAAAT
                      ____________________________________________________________
consensus             CTCCTTAAAGGCTGTGTTTCTGATGTGAGTCCAATCACTCCTGCAGGCAGCATAGAAAAT
 
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rJMSF048D08+          TCCGGAGGCCTCATGCACTGTAATATTAGCTTTGAATGAATAGTTGTTGGGTTTTTAAGT
rJMFF019D05+          TCCGGAGGCCTCATGCACTGTAATATTAGCTTTGAATGAATAGTTGTTGGGTTTTTAAGT
                      ____________________________________________________________
consensus             TCCGGAGGCCTCATGCACTGTAATATTAGCTTTGAATGAATAGTTGTTGGGTTTTTAAGT
 
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rJMSF048D08+          GCTGGGGTCCATTGTAATGATTTGCAAGAAAATGAAGAAGAGTATAATATAGCTAGCTAG
rJMFF019D05+          GCTGGGGTCCATTGTAATGATTTGCAAGAAAATGAAGAAGAGTATAATATAGCTAGCTAG
                      ____________________________________________________________
consensus             GCTGGGGTCCATTGTAATGATTTGCAAGAAAATGAAGAAGAGTATAATATAGCTAGCTAG
 
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rJMSF048D08+          CTTTCGTGATTGAAATGTTGGCCTGAAAGTAGAGTCCATCATTCTTGTAACTTCATTTTG
rJMFF019D05+          CTTTCGTGATTGAAATGTTGGCCTGAAAGTAGAGTCCATCATTCTTGTAACTTCATTTTG
                      ____________________________________________________________
consensus             CTTTCGTGATTGAAATGTTGGCCTGAAAGTAGAGTCCATCATTCTTGTAACTTCATTTTG
 
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rJMSF048D08+          CCTGTGTTGCTTTTTCCCTGGGACAGGGAAATTCAGGGAATTATGCTGTTGTTACCTACC
rJMFF019D05+          CCTGTGTTGCTTTTTCCCTGGGACAGGGAAATTCAGGGAATTATGCTGTTGTTACCTACC
                      ____________________________________________________________
consensus             CCTGTGTTGCTTTTTCCCTGGGACAGGGAAATTCAGGGAATTATGCTGTTGTTACCTACC
 
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rJMSF048D08+          TACCACCCAAGCTCGCTTGCTCCCTTTCATATCCTCATGTAAATGTAAACTATAGTATGT
rJMFF019D05+          TACCACCCAAGCTCGCTTGCTCCCTTTCATATCCTCATGTAAATGTAAACTATAGTATGT
                      ____________________________________________________________
consensus             TACCACCCAAGCTCGCTTGCTCCCTTTCATATCCTCATGTAAATGTAAACTATAGTATGT
 
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rJMSF048D08+          ATACCATTGACTTAATGTCTTTACTCTTTACCCCTTGCCTTG                  
rJMFF019D05+          ATACCATTGACTTAATGTCTTTACTCTTTACCCCTTGCCTTGTACTCTTCTTCCGCCATA
                      ____________________________________________________________
consensus             ATACCATTGACTTAATGTCTTTACTCTTTACCCCTTGCCTTGTACTCTTCTTCCGCCATA