Contig 011033:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017I03Sequence502011797 (7)ref|XP_009624550.1|5e-44PREDICTED: copper-transporting ATPase PAA2, chloroplastic [Nicotiana tomentosif718011033 (3)ref|XP_006353854.1|2e-58PREDICTED: copper-transporting ATPase PAA2, chloroplastic-like isoform X1 [Sola
JMSF007D19Sequence337011797 (7)ref|XP_009624550.1|5e-30PREDICTED: copper-transporting ATPase PAA2, chloroplastic [Nicotiana tomentosif818011033 (3)ref|XP_006353855.1|4e-117PREDICTED: copper-transporting ATPase PAA2, chloroplastic-like isoform X2 [Sola
JMSF034F16Sequence657021113ref|XP_011089987.1|1e-89PREDICTED: GDSL esterase/lipase At5g22810 [Sesamum indicum]473011033 (3)ref|XP_006353855.1|4e-56PREDICTED: copper-transporting ATPase PAA2, chloroplastic-like isoform X2 [Sola

Alignment

This contig is upended


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rJMSF007D19+                     TNTGATGCATCAAACCCTATTAAACAGTCCATCATCAAGCCATTCGATG
                      ____________________________________________________________
consensus                        TNTGATGCATCAAACCCTATTAAACAGTCCATCATCAAGCCATTCGATG
 
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rJMSF007D19+          ACAATTGTATATGTTGGTAGGGAGGAAGAAGGCATAATAGGTGCTATTGCAATATCTGAT
                      ____________________________________________________________
consensus             ACAATTGTATATGTTGGTAGGGAGGAAGAAGGCATAATAGGTGCTATTGCAATATCTGAT
 
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rJMSF007D19+          AATTTACGTGACGATGCTGAATCCACAATAAAAAGGCTTCAACAGAAGGGAATTAAAACA
                      ____________________________________________________________
consensus             AATTTACGTGACGATGCTGAATCCACAATAAAAAGGCTTCAACAGAAGGGAATTAAAACA
 
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rJMSF007D19+          GTCCTCTTATCTGGGGACAGGGAAGAGGCAGTTGCATCAGTAGCAAGGACAGTTGGGATA
                      ____________________________________________________________
consensus             GTCCTCTTATCTGGGGACAGGGAAGAGGCAGTTGCATCAGTAGCAAGGACAGTTGGGATA
 
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rJMSF007D19+          AAGGATGAATTTATTAATGCATCCCTGACACCACAGCAAAAATCTGCTACCATCTCAAGT
                      ____________________________________________________________
consensus             AAGGATGAATTTATTAATGCATCCCTGACACCACAGCAAAAATCTGCTACCATCTCAAGT
 
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rJMSF007D19+          CTTCAAGCTTCAGGACATCAACTAGCCATGGTTGGTGATGGCATTAATGATGCACCATCT
rJMFF017I03+            TCAAGCTTCAGGACATCAACTAGCCATGGTTGGTGATGGCATTAATGATGCACCATCT
                      ____________________________________________________________
consensus             CTTCAAGCTTCAGGACATCAACTAGCCATGGTTGGTGATGGCATTAATGATGCACCATCT
 
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rJMSF034F16+            GGCTCTTGCTGATGTTGGGATTGCTTTGCAAGTTGAAGGACAGGAAAATGCAGCCTCT
rJMSF007D19+          CTGGCTCTTGCTGATGTTGGGATTGCTTTGCAAGTTGAAGGACAGGAAAATGCAGCCTCT
rJMFF017I03+          CTGGCTCTTGCTGATGTTGGGATTGCTTTGCAAGTTGAAGGACAGGAAAATGCAGCCTCT
                      ____________________________________________________________
consensus             CTGGCTCTTGCTGATGTTGGGATTGCTTTGCAAGTTGAAGGACAGGAAAATGCAGCCTCT
 
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rJMSF034F16+          AATGCAGCGTCAATCATACTTCTCGGAAATAGACTTTCTCAGGTTGTTGAAGCATTTGAG
rJMSF007D19+          AATGCAGCGTCAATCATACTTCTCGGAAATAGACTTTCTCAGGTTGTTGAAGCATTTGAG
rJMFF017I03+          AATGCAGCGTCAATCATACTTCTNTGAAATAGACTTTCTCAGGTTGTTGAAGCATTTGAG
                      ____________________________________________________________
consensus             AATGCAGCGTCAATCATACTTCTCGGAAATAGACTTTCTCAGGTTGTTGAAGCATTTGAG
 
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rJMSF034F16+          CTTGCACAGGCAACCATGTCAAAAGTTCATCAAAACTTATCTTGGGCAGTAGCATATAAT
rJMSF007D19+          CTTGCACAGGCAACCATGTCAAAAGTTCATCAAAACTTATCTTGGGCAGTAGCATATAAT
rJMFF017I03+          CTTGCACAGGCAACCATGTCAAAAGTTCATCAAAACTTATCTTGGGCAGTAGCATATAAT
                      ____________________________________________________________
consensus             CTTGCACAGGCAACCATGTCAAAAGTTCATCAAAACTTATCTTGGGCAGTAGCATATAAT
 
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rJMSF034F16+          GCAGTCACAATCCCCATAGCAGCTGGAGCACTACTTCCCAAGTTCGATTTTGCCATGACA
rJMSF007D19+          GCAGTCACAATCCCCATAGCAGCTGGAGCACTACTTCCCAAGTTCGATTTTGCCATGACA
rJMFF017I03+          GCAGTCACAATCCCCATAGCAGCTGGAGCACTACTTCCCAAGTTCGATTTTGCCATGACA
                      ____________________________________________________________
consensus             GCAGTCACAATCCCCATAGCAGCTGGAGCACTACTTCCCAAGTTCGATTTTGCCATGACA
 
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rJMSF034F16+          CCATCTCTATCAGGGGGATTGATGGCCTTGAGCTCAATATTTGTGGTCACCAACTCCTTA
rJMSF007D19+          CCATCTCTATCAGGGGGATTGATGGCCTTGAGCTCAATATTTGTGGTCACCAACTCCTTA
rJMFF017I03+          CCATCTCTATCAGGGGGATTGATGGCCTTGAGCTCAATATTTGTGGTCACCAACTCCTTA
                      ____________________________________________________________
consensus             CCATCTCTATCAGGGGGATTGATGGCCTTGAGCTCAATATTTGTGGTCACCAACTCCTTA
 
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rJMSF034F16+          CTTCTGCAGCTCCATGGTTCTGGAAGGAAAAGGGGTGAGACTTCCAACCATAAACAACGT
rJMSF007D19+          CTTCTGCAGCTCCATGGTTCTGGAAGGAAAAGGGGTGAGACTTCCAACCATAAACAACGT
rJMFF017I03+          CTTCTGCAGCTCCATGGTTCTGGAAGGAAAAGGGGTGAGACTTCCAACCATAAACAACGT
                      ____________________________________________________________
consensus             CTTCTGCAGCTCCATGGTTCTGGAAGGAAAAGGGGTGAGACTTCCAACCATAAACAACGT
 
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rJMSF034F16+          GTTCAATAGTGTACAAGGGTTAGGTTTTCCACGGCCACCTAACAATAATAATGATAATGC
rJMSF007D19+          GTTCAATAGTGTACAAGGGTTAGGTTTTCCACGGCCACCTAACAATAATAATGATAATGC
rJMFF017I03+          GTTCAATAGTGTACAAGGGTTAGGTTTTCCACGGCCACCTAACAATAATAATGATAATGC
                      ____________________________________________________________
consensus             GTTCAATAGTGTACAAGGGTTAGGTTTTCCACGGCCACCTAACAATAATAATGATAATGC
 
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rJMSF034F16+          TTTAGATTTGAGTTGTATGGTAGCAGCCTCATTATGTGGTT                   
rJMSF007D19+          TTTAGATTTGAGTTGTATGGTAGCAGCCTCATTATGTGGTT                   
rJMFF017I03+          TTTAGATTTGAGTTGTATGGTAGCAGCCTCATTATGTGGTTTGCATCCAATAAATTGCAT
                      ____________________________________________________________
consensus             TTTAGATTTGAGTTGTATGGTAGCAGCCTCATTATGTGGTTTGCATCCAATAAATTGCAT
 
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rJMFF017I03+          GTGTTCAATAAACTTATTATCTCCTGCAGCCTGCTTCTATTTGATGGTTTTAATGGGGGT
                      ____________________________________________________________
consensus             GTGTTCAATAAACTTATTATCTCCTGCAGCCTGCTTCTATTTGATGGTTTTAATGGGGGT
 
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rJMFF017I03+          GGAACTTTGTATTAAGAATACCACCAGTCTGGTCTTTGTTATATTATTTAGAGTTACGGA
                      ____________________________________________________________
consensus             GGAACTTTGTATTAAGAATACCACCAGTCTGGTCTTTGTTATATTATTTAGAGTTACGGA
 
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rJMFF017I03+          CCGATTTGGTCCCTTCACTATAGCGAAATTACTGATTTCGCCCTCGACTATCATGCTTAC
                      ____________________________________________________________
consensus             CCGATTTGGTCCCTTCACTATAGCGAAATTACTGATTTCGCCCTCGACTATCATGCTTAC