Contig 011030:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017E08Sequence526000085 (2)ref|XP_009601808.1|2e-10PREDICTED: uncharacterized protein LOC104097013 isoform X3 [Nicotiana tomentosi764011030 (2)ref|XP_009785970.1|2e-60PREDICTED: uncharacterized protein LOC104234155 isoform X2 [Nicotiana sylvestri
JMFF035B14Sequence522000085 (2)ref|XP_009601808.1|2e-09PREDICTED: uncharacterized protein LOC104097013 isoform X3 [Nicotiana tomentosi716011030 (2)ref|XP_009785970.1|8e-61PREDICTED: uncharacterized protein LOC104234155 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF017E08+                          TTCAGGGACAGAGCGTGCTGTAAAAACTTGGCAGGCCTCATTNG
                      ____________________________________________________________
consensus                             TTCAGGGACAGAGCGTGCTGTAAAAACTTGGCAGGCCTCATTNG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035B14+            GCCACAGAAGATGGCATTATGAGTTCAGAACTTCT--GAGAGATTATACATGGAACAA
rJMFF017E08+          GAGCCACAGAAGATGGCATTATGAGTTCAGAACTTCTTGAGAGGATTATACATGGAACAA
                      ____________________________________________________________
consensus             GAGCCACAGAAGATGGCATTATGAGTTCAGAACTTCTTGGGGGGATTATACATGGAACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035B14+          ACATTTGAGAAATCTGACTTGAGATTGAATAAGAATCCGGAGCAACATGATGTGAATTCT
rJMFF017E08+          ACATTTGAGAAATCTGACTTGAGATTGAATAAGAATCCGGAGCAACATGATGTGAATTCT
                      ____________________________________________________________
consensus             ACATTTGAGAAATCTGACTTGAGATTGAATAAGAATCCGGAGCAACATGATGTGAATTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035B14+          CCAGAGGCACGGGCAAATGGAGCACCAGTTGCTTCTATAATGGAAATATCAGAATTTGAG
rJMFF017E08+          CCAGAGGCACGGGCAAATGGAGCACCAGTTGCTTCTATAATGGAAATATCAGAATTTGAG
                      ____________________________________________________________
consensus             CCAGAGGCACGGGCAAATGGAGCACCAGTTGCTTCTATAATGGAAATATCAGAATTTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035B14+          CAGAAAGTTGTTAAAGAAGGTGACACAGAAACTGATATTACCCAGCATCGGGTGTTTCTA
rJMFF017E08+          CAGAAAGTTGTTAAAGAAGGTGACACAGAAACTGATATTACCCAGCATCGGGTGTTTCTA
                      ____________________________________________________________
consensus             CAGAAAGTTGTTAAAGAAGGTGACACAGAAACTGATATTACCCAGCATCGGGTGTTTCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035B14+          CTTGGAGAGAACCGGTGGGAAGAACCGTCGAGGCTTAAGGGAAACATGCAACCAGCTGCA
rJMFF017E08+          CTTGGAGAGAACCGGTGGGAAGAACCGTCGAGGCTTAAGGGAAACATGCAACCAGCTGCA
                      ____________________________________________________________
consensus             CTTGGAGAGAACCGGTGGGAAGAACCGTCGAGGCTTAAGGGAAACATGCAACCAGCTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035B14+          ACCAAGAGTTCAAGTGGCAAGGCAACAACAAAGTGTCTCTCTTGCCGTGGAGAGGGCCGC
rJMFF017E08+          ACCAAGAGTTCAAGTGGCAAGGCAACAACAAAGTGTCTCTCTTGCCGTGGAGAGGGCCGC
                      ____________________________________________________________
consensus             ACCAAGAGTTCAAGTGGCAAGGCAACAACAAAGTGTCTCTCTTGCCGTGGAGAGGGCCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035B14+          TTATTATGCATGGAATGTGACGGAAGTGGTGAGCCAAATATTGAACCACAGTTTTTGGAA
rJMFF017E08+          TTATTATGCATGGAATGTGACGGAAGTGGTGAGCCAAATATTGAACCACAGTTTTTGGAA
                      ____________________________________________________________
consensus             TTATTATGCATGGAATGTGACGGAAGTGGTGAGCCAAATATTGAACCACAGTTTTTGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035B14+          TGGGTAGATGAAGACACAAAGTGTCCATACTGCGAAGGTCTTGGATTTGTAACTTGCGAT
rJMFF017E08+          TGGGTAGATGAAGACACAAAGTGTCCATACTGCGAAGGTCTTGGATTTGTAACTTGCGAT
                      ____________________________________________________________
consensus             TGGGTAGATGAAGACACAAAGTGTCCATACTGCGAAGGTCTTGGATTTGTAACTTGCGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035B14+          GTATGTGAAGGTAAAAAGGTAGTTGAGACATGATACATGTATTGTTTTTTCCCTTTTATT
rJMFF017E08+          GTATGTGAAGGTAAAAAGGTAGTTGAGACATGATACATGTATTGTTTTTTCCCTTTTATT
                      ____________________________________________________________
consensus             GTATGTGAAGGTAAAAAGGTAGTTGAGACATGATACATGTATTGTTTTTTCCCTTTTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035B14+          TTCTAATTTTTTAAAATCCTTCTATCCCATTTTTCTTGTGTTGGTGTAGAGGAAGGGGAA
rJMFF017E08+          TTCTAATTTTTTAAAATCCTTCTATCCCATTTTTCTTGTGTTGGTGTAGAGGAAGGGGAA
                      ____________________________________________________________
consensus             TTCTAATTTTTTAAAATCCTTCTATCCCATTTTTCTTGTGTTGGTGTAGAGGAAGGGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035B14+          TTAGGTAGATAGACAGCTAAGAACATATGTATATGTAGTTCAATACAAAATTACATTTAA
rJMFF017E08+          TTAGGTAGATAGACAGCTAAGAACATATGTATATGTAGTTCAATACAAAATTACATTTAA
                      ____________________________________________________________
consensus             TTAGGTAGATAGACAGCTAAGAACATATGTATATGTAGTTCAATACAAAATTACATTTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035B14+          TGTCACAAATAGTATTCATGTACACACAAAAAATAAAAGTGTAATTGATCCAAGAGATGT
rJMFF017E08+          TGTCACAAATAGTATTCATGTACACACAAAAAATAAAAGTGTAATTGATCCAAGAGATGT
                      ____________________________________________________________
consensus             TGTCACAAATAGTATTCATGTACACACAAAAAATAAAAGTGTAATTGATCCAAGAGATGT