Contig 011029:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017B03Sequence553003632 (5)gb|EYU28744.1|9e-52hypothetical protein MIMGU_mgv1a003087mg [Erythranthe guttata] gb|EYU28745.1| hy763011029 (4)gb|ABO93008.1|2e-88putative methyltransferase [Solanum tuberosum]
JMSF004P05Sequence323003738 (9)ref|XP_009784300.1|2e-24PREDICTED: uncharacterized protein LOC104232733 isoform X2 [Nicotiana sylvestri228011029 (4)
JMSF017F05Sequence572003632 (5)gb|EYU28744.1|7e-43hypothetical protein MIMGU_mgv1a003087mg [Erythranthe guttata] gb|EYU28745.1| hy738011029 (4)gb|ABO93008.1|6e-90putative methyltransferase [Solanum tuberosum]
JMSF023I20Sequence601003632 (5)gb|EYU28744.1|1e-62hypothetical protein MIMGU_mgv1a003087mg [Erythranthe guttata] gb|EYU28745.1| hy735011029 (4)gb|ABO93008.1|4e-89putative methyltransferase [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF023I20+                              GGTATCGTAACATACTGGATATGAATGCCGGATTGGGAGG
rJMSF017F05+                              GGTATCGTAACATACTGGATATGAATGCCGGATTGGGAGG
rJMFF017B03+                        CGGGAAGGTATCGTAACATACTGNATATGAATGCCGGATTGGGAGG
                      ____________________________________________________________
consensus                           CGGGAAGGTATCGTAACATACTGGATATGAATGCCGGATTGGGAGG
 
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rJMSF023I20+          TTTCGCTGCAGAGCTTACATCTCCCAAGACATGGGTTATGAATGTCATGCCCACAATCGC
rJMSF017F05+          TTTCGCTGCAGAGCTTACATCTCCCAAGACATGGGTTATGAATGTCATGCCCACAATCGC
rJMFF017B03+          TTTCGCTGCAGAGCTTACATCTCCCAAGACATGGGTTATGAATGTCATGCCCACAATCGC
                      ____________________________________________________________
consensus             TTTCGCTGCAGAGCTTACATCTCCCAAGACATGGGTTATGAATGTCATGCCCACAATCGC
 
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rJMSF023I20+          CAAGAAAAATACTTTGGGTGTTATATATGAACGAGGAATGATCGGTATCTACCACGATTG
rJMSF017F05+          CAAGAAAAATACTTTGGGTGTTATATATGAACGAGGAATGATCGGTATCTACCACGATTG
rJMFF017B03+          CAAGAAAAATACTTTGGGTGTTATATATGAACGAGGAATGATCGGTATCTACCACGATTG
                      ____________________________________________________________
consensus             CAAGAAAAATACTTTGGGTGTTATATATGAACGAGGAATGATCGGTATCTACCACGATTG
 
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rJMSF023I20+          GTGTGAAGGCTTCTCCACGTACCCGAGGACTTATGATCTCATTCATGCTAGCGGTGTCTT
rJMSF017F05+          GTGTGAAGGCTTCTCCACGTACCCGAGGACTTATGATCTCATTCATGCTAGCGGTGTCTT
rJMFF017B03+          GTGTGAAGGCTTCTCCACGTACCCGAGGACTTATGATCTCATTCATGCTAGCGGTGTCTT
                      ____________________________________________________________
consensus             GTGTGAAGGCTTCTCCACGTACCCGAGGACTTATGATCTCATTCATGCTAGCGGTGTCTT
 
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rJMSF023I20+          CAGTTTATACAAGGATAAGTGTGATTTTGAAGACATTCTTTTAGAGATGGACCGAATTCT
rJMSF017F05+          CAGTTTATACAAGGATAAGTGTGATTTTGAAGACATTCTTTTAGAGATGGACCGAATTCT
rJMFF017B03+          CAGTTTATACAAGGATAAGTGTGATTTNGAAGACATTCTTTTAGAGATGGACCGAATTCT
                      ____________________________________________________________
consensus             CAGTTTATACAAGGATAAGTGTGATTTTGAAGACATTCTTTTAGAGATGGACCGAATTCT
 
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rJMSF023I20+          ACGCCCAGAAGGCGCGGTTATTTTCAGGGACGAAGTGGACGTGCTGATAAAGGTGAGGAA
rJMSF017F05+          ACGCCCAGAAGGCGCGGTTATTTTCAGGGACGAAGTGGACGTGCTGATAAAGGTGAGGAA
rJMFF017B03+          ACGCCCAGAAGGCGCGGTTATTTTCAGGGACGAAGTGGACGTGCTGATAAAGGTGAGGAA
                      ____________________________________________________________
consensus             ACGCCCAGAAGGCGCGGTTATTTTCAGGGACGAAGTGGACGTGCTGATAAAGGTGAGGAA
 
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rJMSF023I20+          GATAATCGGAGGCATGCGATGGGACTTCAAACTGATGGACCACGAAGACGGGCCCCTCAT
rJMSF017F05+          GATAATCGGAGGCATGCGATGGGACTTCAAACTGATGGACCACGAAGACGGGCCCCTCAT
rJMFF017B03+          GATAATCGGAGGCATGCGATGGGACTTCAAACTGATGGACCACGAAGACGGGCCCCTCAT
                      ____________________________________________________________
consensus             GATAATCGGAGGCATGCGATGGGACTTCAAACTGATGGACCACGAAGACGGGCCCCTCAT
 
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rJMSF023I20+          TCCCGAGAAAATCCTGGTTGCAGTGAAGCAGTACTGGACTGTGGGCGATAACAACTCCAC
rJMSF017F05+          TCCCGAGAAAATCCTGGTTGCAGTGAAGCAGTACTGGACTGTGGGCGATAACAACTCCAC
rJMFF017B03+          TCCCGAGAAAATCCTGGTTGCAGTGAAGCAGTACTGGACTGTGGGCGATAACAACTCCAC
                      ____________________________________________________________
consensus             TCCCGAGAAAATCCTGGTTGCAGTGAAGCAGTACTGGACTGTGGGCGATAACAACTCCAC
 
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rJMSF023I20+          TTCCACGCGATGATGATCTGAGAATGCTGGCATGGAAGACGAGGAACGGCTCGCTCAATG
rJMSF004P05+                                                 CGAGGAACGGCTCNCTCAATG
rJMSF017F05+          TTCCACGCGATGATGATCTGAGAATGCTGGCATGGAAGACGAGGAACGGCTCGCTCAATG
rJMFF017B03+          TTCCACGCGATGATGATCTGAGAATGCTGGCATGGAAGACGAGGAACGGCTCGCTCAATG
                      ____________________________________________________________
consensus             TTCCACGCGATGATGATCTGAGAATGCTGGCATGGAAGACGAGGAACGGCTCGCTCAATG
 
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rJMSF023I20+          GTATGGATTATACAATTAAGCACTTTGATTACCTGTGCACCATTCATTTTACCACAGGAA
rJMSF004P05+          GTNTGGATTATACAACTAAGCACTTTGATTACTNGTGCACCATTCATTTTACCACAGGAA
rJMSF017F05+          GTATGGATTATACAATTAAGCACTTTGATTACCTGTGCACCATTCATTTTACCACAGGAA
rJMFF017B03+          GTATGGATTATACAATTAAGCACTTTGATTACCTGTGCACCATTCATTTTACCACAGGAA
                      ____________________________________________________________
consensus             GTATGGATTATACAATTAAGCACTTTGATTACCTGTGCACCATTCATTTTACCACAGGAA
 
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rJMSF023I20+          ATTTTGGTCCTCAACAGGTTCACATATTGAGTAGTAGGTTGT--ATGGTGTAATTTATTT
rJMSF004P05+          ATTTTNGTCCTCAACAGGTTCACATATTGAGTAGTAGGTTGTCATGCGTGTAATTTATTT
rJMSF017F05+          ATTTTGGTCCTCAACAGGTTCACATATTGAGTAGTAGGTTGT--ATGGTGTAATTTATTT
rJMFF017B03+          ATTTTGGTCCTCAACAGTTTCACATATTGAGTAGTAGGTTGT--ATGGTGTAATTTATTT
                      ____________________________________________________________
consensus             ATTTTGGTCCTCAACAGGTTCACATATTGAGTAGTAGGTTGT--ATGGTGTAATTTATTT
 
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rJMSF023I20+          CCTTATTGCA-GAGGGATAAATTTAGTAGTGTAACATTATGTTCTTTTTGTGGTTTTACC
rJMSF004P05+          CCTTATTGCACGAGGGATAAANTTAGTAGTGTAACATTATGTTCTTNNTGTGGTNTTACC
rJMSF017F05+          CCTTATTGCA-GAGGGATAAATTTAGTAGTGTAACATTATGTTCTTTTTGTGGTTTTACC
rJMFF017B03+          CCTTATTGCA-GAGGGATAAATTTAGTAGTGTAACATTATGTTCTTTTTGTGGTTTTACC
                      ____________________________________________________________
consensus             CCTTATTGCA-GAGGGATAAATTTAGTAGTGTAACATTATGTTCTTTTTGTGGTTTTACC
 
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rJMSF023I20+          CTTTCTGGGAAACCAGCTTTTGCTTTCATGTCAAAAGA                      
rJMSF004P05+          CTTTCTGGGAAACCAGCTTTTGC                                     
rJMSF017F05+          CTTTCTGGGAAACCAGCTTTTGCTTTCATGTCAAAAGA                      
rJMFF017B03+          CTTTCTGGGAAACCAGCTTTTGCTTTCATGTCAAAAGACACAACCTCATGATAAAATTAG
                      ____________________________________________________________
consensus             CTTTCTGGGAAACCAGCTTTTGCTTTCATGTCAAAAGACACAACCTCATGATAAAATTAG