Contig 011028:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017A02Sequence559022719ref|XP_009374826.1|5e-55PREDICTED: vesicle-associated protein 4-2 [Pyrus x bretschneideri]746011028 (2)ref|XP_006413777.1|4e-79hypothetical protein EUTSA_v10025857mg [Eutrema salsugineum] gb|ESQ55230.1| hypo
JMSF035J19Sequence696011028 (2)ref|XP_009790480.1|2e-68PREDICTED: vesicle-associated protein 4-2 [Nicotiana sylvestris]738005942 (13)gb|ABF06448.1|1e-136putative monosaccharide transporter MST1 [Nicotiana langsdorffii x Nicotiana sa

Alignment

This contig is upended


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JMSF035J19-               GGCTAGTCAGGCGTTCCATTTGCCCCGAAATTCCAACCCCTCACTCTTTTCAAACT
                      ____________________________________________________________
consensus                 GGCTAGTCAGGCGTTCCATTTGCCCCGAAATTCCAACCCCTCACTCTTTTCAAACT
 
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JMSF035J19-           TCAACAACCGCCGCTCACTCTCTCTCTGTGTCACCCGCTACCAAACAAAACCTACGCCGT
                      ____________________________________________________________
consensus             TCAACAACCGCCGCTCACTCTCTCTCTGTGTCACCCGCTACCAAACAAAACCTACGCCGT
 
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JMSF035J19-           TTAGCTTCACGATCGGAATCACTCATGGCCATCGCCGACGACAAGGATGGCAAAGTCTGG
                      ____________________________________________________________
consensus             TTAGCTTCACGATCGGAATCACTCATGGCCATCGCCGACGACAAGGATGGCAAAGTCTGG
 
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JMSF035J19-           AGTCTGTTTAAGCTGATGCCGTTTCGAAGAACCTCTTCTTCCTCCTCTGTTTCCGCTGCT
                      ____________________________________________________________
consensus             AGTCTGTTTAAGCTGATGCCGTTTCGAAGAACCTCTTCTTCCTCCTCTGTTTCCGCTGCT
 
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JMSF035J19-           AATTGGCACAACAACACTTGTCCGCGGTCTGATGGATTAAGCGCCCCCAAAGTCTCCGCC
                      ____________________________________________________________
consensus             AATTGGCACAACAACACTTGTCCGCGGTCTGATGGATTAAGCGCCCCCAAAGTCTCCGCC
 
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JMSF035J19-           GTAGCTCGATCTTTTCTCCCCGCACGCCGTCGTTTGAAGCTCGATCCGGCAAATACGCTG
                      ____________________________________________________________
consensus             GTAGCTCGATCTTTTCTCCCCGCACGCCGTCGTTTGAAGCTCGATCCGGCAAATACGCTG
 
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JMSF035J19-           TATTTTCCTTATGAGCCTGGCAAGCAGGTTCGAAGTGCTATTAAGATTAAAAATACAAGC
rJMFF017A02+                                     GTTCGAAGTGCTATTAAGATCAAGAATACTAGC
                      ____________________________________________________________
consensus             TATTTTCCTTATGAGCCTGGCAAGCAGGTTCGAAGTGCTATTAAGATTAAGAATACTAGC
 
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JMSF035J19-           AAATCTCATGTAGCTTTCAAGTTCCAAACAACTTCACCAAAAACCTGTTTCATGCGTCCT
rJMFF017A02+          AAGTCCCTTGTAGCTTTCGAGTTCCAAACAACTTCACCGAAAAGCTGTTTCATGCGTCCT
                      ____________________________________________________________
consensus             AAGTCTCTTGTAGCTTTCGAGTTCCAAACAACTTCACCGAAAAGCTGTTTCATGCGTCCT
 
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JMSF035J19-           CCTGCTGCCATTCTTGCTCCAGGCAACAGCATTATAGCCACTGTGTTCAAATTTGTAGAG
rJMFF017A02+          CCCGGGGCTGTTCTTGCTCCTGGCAAGAGTATTATAGCAACTGTGTTCAAGTTTGTAGAG
                      ____________________________________________________________
consensus             CCTGGTGCTGTTCTTGCTCCTGGCAAGAGTATTATAGCCACTGTGTTCAAGTTTGTAGAG
 
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JMSF035J19-           CATCCAGAGAA                                                 
rJMFF017A02+          CCTCCGGAGAAGAACGAAAAACCTAATCAGAGAAACAAGGTGAAATTCAAAATCATGAGC
                      ____________________________________________________________
consensus             CCTCCGGAGAAGAACGAAAAACCTAATCAGAGAAACAAGGTGAAATTCAAAATCATGAGC
 
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rJMFF017A02+          CTCAAGGTTAAAGGAGACATGGAGTATAAACCCGAGCTGTTTGAAGAGCAAAGCGATCAA
                      ____________________________________________________________
consensus             CTCAAGGTTAAAGGAGACATGGAGTATAAACCCGAGCTGTTTGAAGAGCAAAGCGATCAA
 
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rJMFF017A02+          ATAGCTAAGGAACAGATACTGCAGGTTGTTTTTCTTGATGTGGGGCGTCCTACTGCTGCT
                      ____________________________________________________________
consensus             ATAGCTAAGGAACAGATACTGCAGGTTGTTTTTCTTGATGTGGGGCGTCCTACTGCTGCT
 
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rJMFF017A02+          TTAGAGAAACTCAAGCGCCAGCTGGCTGAAGCCGACGCTGCTGCTGAGGCCTCCAAGAAG
                      ____________________________________________________________
consensus             TTAGAGAAACTCAAGCGCCAGCTGGCTGAAGCCGACGCTGCTGCTGAGGCCTCCAAGAAG
 
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rJMFF017A02+          CCAGCAAAAGATGCAGATCCACAGTTTATTGGCGAAGGACTTGTGGTTGATGAATGGAAA
                      ____________________________________________________________
consensus             CCAGCAAAAGATGCAGATCCACAGTTTATTGGCGAAGGACTTGTGGTTGATGAATGGAAA
 
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rJMFF017A02+          GAACGAAGAGAACGATACCTAGCTCAACAGAACGCTGGATCTGTAGAATCGATATAGATA
                      ____________________________________________________________
consensus             GAACGAAGAGAACGATACCTAGCTCAACAGAACGCTGGATCTGTAGAATCGATATAGATA
 
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rJMFF017A02+          GCTGGGGCCTGGGGTGTCTTTCAGAATCTTGCACTCTAACTGGAAACTTCTGCAGAGTAT
                      ____________________________________________________________
consensus             GCTGGGGCCTGGGGTGTCTTTCAGAATCTTGCACTCTAACTGGAAACTTCTGCAGAGTAT
 
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rJMFF017A02+          AATTCAAACTTGCTATGAATTAAATGTATAGAATGTAGAAAGTATGGAGGCACAGTTTCC
                      ____________________________________________________________
consensus             AATTCAAACTTGCTATGAATTAAATGTATAGAATGTAGAAAGTATGGAGGCACAGTTTCC
 
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rJMFF017A02+          CCCTTCTGTGATATAATTTTGGTGTGAAAATCTTCCTCTCTAGTTAATGGTGCCAGAAAA
                      ____________________________________________________________
consensus             CCCTTCTGTGATATAATTTTGGTGTGAAAATCTTCCTCTCTAGTTAATGGTGCCAGAAAA