Contig 011025:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016K07Sequence520004571 (2)ref|XP_006365977.1|2e-52PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 4-like [Solanum tuber301011025 (2)emb|CDY31816.1|5e-17BnaC09g13330D [Brassica napus]
JMFF028K24Sequence453004571 (2)ref|XP_006366747.1|1e-45PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 4-like isoform X2 [So698011025 (2)ref|XP_010676166.1|3e-53PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 4 [Beta vulgaris subs

Alignment

This contig is upended


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rJMFF028K24+                               CGGTGGTGTTGTAAGCGTGGATGAGAACCGTGTAGGGCC
                      ____________________________________________________________
consensus                                  CGGTGGTGTTGTAAGCGTGGATGAGAACCGTGTAGGGCC
 
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rJMFF028K24+          ACTCTACAAGCATGTTTTTCCACCGGCCTTAGCCCCGGGGCTTTCATTTGTTGGGATCCC
                      ____________________________________________________________
consensus             ACTCTACAAGCATGTTTTTCCACCGGCCTTAGCCCCGGGGCTTTCATTTGTTGGGATCCC
 
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rJMFF028K24+          GTGGAAGGTATAATCCTTTCACATACGCACATTTCCCGGTTTTGCACACTTAGCTAATCG
                      ____________________________________________________________
consensus             GTGGAAGGTATAATCCTTTCACATACGCACATTTCCCGGTTTTGCACACTTAGCTAATCG
 
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rJMFF028K24+          AGCGTTTTACGTTTATGGTGGATGAGCAAGGCGTTTTGTTGTGTTGTTTCCAGGTCGTTC
                      ____________________________________________________________
consensus             AGCGTTTTACGTTTATGGTGGATGAGCAAGGCGTTTTGTTGTGTTGTTTCCAGGTCGTTC
 
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rJMFF028K24+          CGTTTATTTTGTGTGAATTACAGAGCAAGTGGATCGCCAGGGTCCTATCTGGCCGAGTTT
                      ____________________________________________________________
consensus             CGTTTATTTTGTGTGAATTACAGAGCAAGTGGATCGCCAGGGTCCTATCTGGCCGAGTTT
 
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rJMFF028K24+          GTCTTCCACCGGAGGAGGAAATGATGGCTGACGTTGAAACTCTCTACTCGGATATGGAGA
                      ____________________________________________________________
consensus             GTCTTCCACCGGAGGAGGAAATGATGGCTGACGTTGAAACTCTCTACTCGGATATGGAGA
 
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rJMFF028K24+          AACATGGCACGCTAAAACGATACACCCATCGAGTAGGCGAGCATCAGTTTGAGTACGACG
rJMFF016K07+                                                                     G
                      ____________________________________________________________
consensus             AACATGGCACGCTAAAACGATACACCCATCGAGTAGGCGAGCATCAGTTTGAGTACGACG
 
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rJMFF028K24+          ACTGGATAGCTGCCCAGTGTGATTTTCCAGCAATCGAAGAATGGAGAAAGGAAATGTATT
rJMFF016K07+          ACTGGATAGCTGCCCAGTGTGATTTTCCAGCAATCGAAGAATGGAGAAAGGAAATGTATT
                      ____________________________________________________________
consensus             ACTGGATAGCTGCCCAGTGTGATTTTCCAGCAATCGAAGAATGGAGAAAGGAAATGTATT
 
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rJMFF028K24+          CCGCGACTGGCCTGAGAAAAAGAGGACAGCCCGAGACATACCGCGATCTATGGGACGATG
rJMFF016K07+          CCGCGACTGGCCTGAGAAAAAGAGGACAGCCCGAGACATACCGCGATCTATGGGACGATG
                      ____________________________________________________________
consensus             CCGCGACTGGCCTGAGAAAAAGAGGACAGCCCGAGACATACCGCGATCTATGGGACGATG
 
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rJMFF028K24+          AACACTTGATTTCACAGGCAAATGAAGACTTCATGAGATATATTATTCCAAAGGTCCCAA
rJMFF016K07+          AACACTTGATTTCACAGGCAAATGAAGACTTCATGAGATATATTATTCCAAAGGTCCCAA
                      ____________________________________________________________
consensus             AACACTTGATTTCACAGGCAAATGAAGACTTCATGAGATATATTATTCCAAAGGTCCCAA
 
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rJMFF028K24+          TAACTAAACTGTGAAATATTGCAACTTACATTTTATAGACTTATCAAGTACACACTGCAT
rJMFF016K07+          TAACTAAACTGTGAAATATTGCAACTTACATTTTATAGACTTATCAAGTACACACTGCAT
                      ____________________________________________________________
consensus             TAACTAAACTGTGAAATATTGCAACTTACATTTTATAGACTTATCAAGTACACACTGCAT
 
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rJMFF028K24+          AATATTATCTGTACAACCATATCACAGCAGTCACATTCTTCATTGATTAAATAAATGAA 
rJMFF016K07+          AATATTATCTGTACAACCATATCACAGCAGTCACATTCTTCATTGATTAAATAAATGAAA
                      ____________________________________________________________
consensus             AATATTATCTGTACAACCATATCACAGCAGTCACATTCTTCATTGATTAAATAAATGAAA