Contig 011021:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015N10Sequence571011021 (2)ref|XP_009598710.1|7e-91PREDICTED: ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [Nicotiana 650011021 (2)ref|XP_009774664.1|1e-80PREDICTED: ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [Nicotiana

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF015N10- GAATACACCCCAGACATGATTCTTCAGCTGCCGCGATTTTCTTGTGTTTTCTGTCCTA
                      ____________________________________________________________
consensus GAATACACCCCAGACATGATTCTTCAGCTGCCGCGATTTTCTTGTGTTTTCTGTCCTA
 
. : . : . : . : . : . :
JMFF015N10- AGCTCCCAATTTGACTCTCCAAACTACTCTCTCAGAACATTCTTCCCAGCTTTTCCATCT
                      ____________________________________________________________
consensus AGCTCCCAATTTGACTCTCCAAACTACTCTCTCAGAACATTCTTCCCAGCTTTTCCATCT
 
. : . : . : . : . : . :
JMFF015N10- CCGCCGCCACACCGCGCGCTCAAAAAGTTTAGTTCCTAAGCCGTGAGGATGGTGAAGGCC
                      ____________________________________________________________
consensus CCGCCGCCACACCGCGCGCTCAAAAAGTTTAGTTCCTAAGCCGTGAGGATGGTGAAGGCC
 
. : . : . : . : . : . :
JMFF015N10- ATAATCGCACCGTCGATGCTGTCATCGGACTTCGCCAATCTGGCCTCTGAAGCCGAAAAG
                      ____________________________________________________________
consensus ATAATCGCACCGTCGATGCTGTCATCGGACTTCGCCAATCTGGCCTCTGAAGCCGAAAAG
 
. : . : . : . : . : . :
JMFF015N10- ATGATCCACTGCGGCGCCGATTGGCTCCATATGGACATCATGGATGGTCACTTTGTACCA
                      ____________________________________________________________
consensus ATGATCCACTGCGGCGCCGATTGGCTCCATATGGACATCATGGATGGTCACTTTGTACCA
 
. : . : . : . : . : . :
JMFF015N10- AATCTTACAATTGGTGCTCCAGTAATTGAAAGCCTGAGAAAGCACACAAAGGCATATTTA
                      ____________________________________________________________
consensus AATCTTACAATTGGTGCTCCAGTAATTGAAAGCCTGAGAAAGCACACAAAGGCATATTTA
 
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JMFF015N10- GATTGCCACCTCATGGTGACAAATCCTCTTGACTATGTGGAACCATTAGGAAAAGCTGGT
                      ____________________________________________________________
consensus GATTGCCACCTCATGGTGACAAATCCTCTTGACTATGTGGAACCATTAGGAAAAGCTGGT
 
. : . : . : . : . : . :
JMFF015N10- GCCTCAGGTTTTACTTTCCATGTTGAGGCATCAAGAGATAATTGGCAGGAACTTGTCCAA
rJMFF015N10+ CCATGTTGAGGCATCAAGAGATAATTGGCAGGAACTTGTCCAA
                      ____________________________________________________________
consensus GCCTCAGGTTTTACTTTCCATGTTGAGGCATCAAGAGATAATTGGCAGGAACTTGTCCAA
 
. : . : . : . : . : . :
JMFF015N10- AGGATAAAGTCCAAGGGCATGAAACCTGGAGTTTCATTGAAGCCTGGTACACCAATTGAA
rJMFF015N10+ AGGATAAAGTCCAAGGGCATGAAACCTGGAGTTTCATTGAAGCCTGGTACACCAATTGAA
                      ____________________________________________________________
consensus AGGATAAAGTCCAAGGGCATGAAACCTGGAGTTTCATTGAAGCCTGGTACACCAATTGAA
 
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JMFF015N10- GAAGTCTATCCTCTGCTTGAAGGTGAAAACTCT
rJMFF015N10+ GAAGTCTATCCTCTGCTTGAAGGTGAAAACTCTGTTGAATTGGTTCTGGTGATGACTGTT
                      ____________________________________________________________
consensus GAAGTCTATCCTCTGCTTGAAGGTGAAAACTCTGTTGAATTGGTTCTGGTGATGACTGTT
 
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rJMFF015N10+ GAACCTGGGTTTGGGGGACAAAAGTTTATGCCTGAAATGATGCAAAAGGTACGCGAACTA
                      ____________________________________________________________
consensus GAACCTGGGTTTGGGGGACAAAAGTTTATGCCTGAAATGATGCAAAAGGTACGCGAACTA
 
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rJMFF015N10+ AGAAAGAAATATCCATCCCTGGATATAGAGGTGGATGGTGGTTTAGGGCCTTCAACCATT
                      ____________________________________________________________
consensus AGAAAGAAATATCCATCCCTGGATATAGAGGTGGATGGTGGTTTAGGGCCTTCAACCATT
 
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rJMFF015N10+ GAAATGGCTGCTTCAGCAGGAGCAAACTGCATCGTCGCAGGAAGTTCAGTGTTTGGAGCT
                      ____________________________________________________________
consensus GAAATGGCTGCTTCAGCAGGAGCAAACTGCATCGTCGCAGGAAGTTCAGTGTTTGGAGCT
 
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rJMFF015N10+ CCAGACCCAGCACATGTGATATCAGTATTGCGAAACAGTGTAGACGGAGCTCAGAAAGGC
                      ____________________________________________________________
consensus CCAGACCCAGCACATGTGATATCAGTATTGCGAAACAGTGTAGACGGAGCTCAGAAAGGC
 
. : . : . : . : . : . :
rJMFF015N10+ AGCAGTAGTATNTGAGGCAGGCAAGGCCTCCCTGTTGCTATATTGTTTCCTCCGGGTTTT
                      ____________________________________________________________
consensus AGCAGTAGTATNTGAGGCAGGCAAGGCCTCCCTGTTGCTATATTGTTTCCTCCGGGTTTT
 
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rJMFF015N10+ GTCAAGGAATTGAATTCTTGTTGTACCAGGGAATAATAATATTAAAAAAAAACAATCACA
                      ____________________________________________________________
consensus GTCAAGGAATTGAATTCTTGTTGTACCAGGGAATAATAATATTAAAAAAAAACAATCACA
 
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rJMFF015N10+ CAAACAAACTTTTTAGCACACTCTCGTGTCATGCTTGTTACTGAGATTACATCAACAATT
                      ____________________________________________________________
consensus CAAACAAACTTTTTAGCACACTCTCGTGTCATGCTTGTTACTGAGATTACATCAACAATT
 
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rJMFF015N10+ AGGTGGGACTTGAAAGTCTGATAATGTATGGATGGATGTAATAAAAGTGAAGCCATTACC
                      ____________________________________________________________
consensus AGGTGGGACTTGAAAGTCTGATAATGTATGGATGGATGTAATAAAAGTGAAGCCATTACC