Contig 011019:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002A24Sequence547011019 (23)ref|XP_009614692.1|163PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]715011019 (23)ref|XP_009614692.1|299PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]
JMFF015F04Sequence566010775 (2)ref|XP_009614692.1|182PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]772011019 (23)ref|XP_009614692.1|269PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]
JMFF042H06Sequence645011019 (23)ref|XP_009614692.1|222PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]612011019 (23)ref|XP_006363989.1|233PREDICTED: uncharacterized protein LOC102601007 [Solanum tuberosum]
JMSF001F07Sequence743011019 (23)ref|XP_006363989.1|348PREDICTED: uncharacterized protein LOC102601007 [Solanum tuberosum]
JMSF001G07Sequence319011019 (23)ref|XP_009614692.1|48.9PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]747011019 (23)ref|XP_006363989.1|348PREDICTED: uncharacterized protein LOC102601007 [Solanum tuberosum]
JMSF003M04Sequence320011019 (23)ref|XP_009614692.1|48.9PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]687011019 (23)ref|XP_009614692.1|297PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]
JMSF017A06Sequence321011019 (23)ref|XP_009614692.1|48.9PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]798011019 (23)ref|XP_006363989.1|350PREDICTED: uncharacterized protein LOC102601007 [Solanum tuberosum]
JMSF023N03Sequence678011019 (23)ref|XP_009614692.1|217PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]770011019 (23)ref|XP_009780705.1|254PREDICTED: uncharacterized protein LOC104229716 [Nicotiana sylvestris] ref|XP_00
JMSF024B11Sequence700011019 (23)ref|XP_009614692.1|244PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]758011019 (23)ref|XP_009614692.1|349PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]
JMSF029J11Sequence692011019 (23)ref|XP_009614692.1|237PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]786011019 (23)ref|XP_006363989.1|330PREDICTED: uncharacterized protein LOC102601007 [Solanum tuberosum]
JMSF032B05Sequence682010775 (2)ref|XP_009614692.1|246PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]686011019 (23)ref|XP_009614692.1|297PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]
JMSF038D20Sequence692011019 (23)ref|XP_009614692.1|237PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]911011019 (23)ref|XP_009614692.1|358PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]
JMSF046J17Sequence779011019 (23)ref|XP_009614692.1|257PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]683011019 (23)ref|XP_009614692.1|295PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF023N03-                                                   GCATAGATATAAGCCTTACC
JMSF046J17-                                                GTAGCATAGATATAAGCCTTACC
                      ____________________________________________________________
consensus                                                  GTAGCATAGATATAAGCCTTACC
 
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JMSF024B11-                            GGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF029J11-                         GACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF003M04-                         GACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF001G07-                         GACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF038D20-                         GACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF023N03-           GACTACCGACTCCTTACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMFF042H06-                           CGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMFF002A24-                           CGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF017A06-                            GGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF046J17-           GACTACCGACTCCTTACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
                      ____________________________________________________________
consensus             GACTACCGACTCCTGACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
 
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JMSF024B11-           CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF029J11-           CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF003M04-           CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF001G07-           CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF038D20-           CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF023N03-           CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMFF042H06-           CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMFF002A24-           CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF017A06-           CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF046J17-           CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
                      ____________________________________________________________
consensus             CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
 
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JMSF024B11-           TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF029J11-           TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF003M04-           TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF001G07-           TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF038D20-           TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF023N03-           TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMFF042H06-           TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMFF002A24-           TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF017A06-           TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF046J17-           TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
                      ____________________________________________________________
consensus             TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
 
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JMSF024B11-           CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF029J11-           CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF003M04-           CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF001G07-           CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF038D20-           CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF023N03-           CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMFF042H06-           CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMFF002A24-           CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF017A06-           CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF046J17-           CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
                      ____________________________________________________________
consensus             CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
 
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JMSF024B11-           TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF029J11-           TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF003M04-           TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF001G07-           TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF038D20-           TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF023N03-           TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMFF042H06-           TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMFF002A24-           TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF017A06-           TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF046J17-           TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
                      ____________________________________________________________
consensus             TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
 
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JMSF024B11-           AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
JMSF029J11-           AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
JMSF003M04-           AATGCAACTCCATTCGTGCATCATTGCCACTTTC                          
JMSF001G07-           AATGCAACTCCATTCGTGCATCATTGCCACTTT                           
JMSF038D20-           AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
JMSF023N03-           AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
JMFF042H06-           AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
JMFF002A24-           AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
JMSF017A06-           AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAA                       
JMSF046J17-           AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
                      ____________________________________________________________
consensus             AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
 
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JMSF024B11-           TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
JMSF029J11-           TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
JMSF038D20-           TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
JMSF023N03-           TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
JMFF042H06-           TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
JMFF002A24-           TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
JMSF046J17-           TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
                      ____________________________________________________________
consensus             TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
 
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JMSF024B11-           ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
JMSF029J11-           ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
JMSF038D20-           ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
JMSF023N03-           ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
JMFF042H06-           ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
JMFF002A24-           ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
JMSF046J17-           ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
                      ____________________________________________________________
consensus             ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
 
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JMSF024B11-           ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
JMSF029J11-           ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
JMSF038D20-           ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
JMSF023N03-           ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
JMFF042H06-           ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
JMFF002A24-           ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
JMSF046J17-           ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
                      ____________________________________________________________
consensus             ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
 
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JMSF024B11-           TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
JMSF029J11-           TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
JMSF038D20-           TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
JMSF023N03-           TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
JMFF042H06-           TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
JMFF002A24-           TTCTGTACAGGAGAATTGCTGA                                      
JMSF046J17-           TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
rJMSF038D20+                             TGAGGTCAAGGCCNATGAAAGAAGAAAAGCCCTGGAAGAGA
                      ____________________________________________________________
consensus             TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
 
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JMSF024B11-           TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTT-GGTTCCGGCC
JMSF029J11-           TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTT-GGTTCCGGCC
JMSF038D20-           TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTT-GGTTCCGGCC
JMSF023N03-           TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTTGGTTCC     
JMFF042H06-           TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTT-GGTTCCGGCC
JMSF046J17-           TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTT-GGTTCCGGCC
rJMSF038D20+          TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTTNGGTTCCGGCC
                      ____________________________________________________________
consensus             TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTT-GGTTCCGGCC
 
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JMSF024B11-           ATAACTTCTCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGAT   
JMSF029J11-           ATAACTTCTCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCC             
JMSF038D20-           ATAACTTCTCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCC             
JMSF046J17-           ATAACTTCTCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
rJMSF017A06+                     TTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
rJMSF024B11+                  TCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
rJMSF001G07+                              TTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
rJMSF001F07+                                 TTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
rJMSF038D20+          ATAACTTCTCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
rJMSF029J11+                                   CTGGTAGTATTGATACCNTGCCAAGCAAAGATGAG
                      ____________________________________________________________
consensus             ATAACTTCTCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
 
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JMSF046J17-           CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGA                       
rJMSF017A06+          CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
rJMSF024B11+          CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
rJMSF001G07+          CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
rJMSF001F07+          CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
rJMSF038D20+          CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
rJMSF029J11+          CAGC-TGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
                      ____________________________________________________________
consensus             CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
 
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rJMSF017A06+          ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF024B11+          ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF001G07+          ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF001F07+          ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF038D20+          ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF029J11+          ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF032B05+                GGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF003M04+                GGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF046J17+                 GAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMFF002A24+             CTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF023N03+                                                        AGTTAAGAGTTGGC
                      ____________________________________________________________
consensus             ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
 
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rJMSF017A06+          CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF024B11+          CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF001G07+          CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF001F07+          CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF038D20+          CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF029J11+          CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF032B05+          CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF003M04+          CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF046J17+          CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMFF002A24+          CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF023N03+          CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMFF015F04+                  TGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
                      ____________________________________________________________
consensus             CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
 
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rJMSF017A06+          CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF024B11+          CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF001G07+          CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF001F07+          CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF038D20+          CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF029J11+          CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF032B05+          CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF003M04+          CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF046J17+          CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMFF002A24+          CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF023N03+          CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMFF042H06+              TTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMFF015F04+          CAGCTTGAAAAGAACATGAAAGTCNTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
                      ____________________________________________________________
consensus             CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
 
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rJMSF017A06+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF024B11+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF001G07+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF001F07+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF038D20+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF029J11+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF032B05+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF003M04+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF046J17+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMFF002A24+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF023N03+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMFF042H06+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMFF015F04+          CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
                      ____________________________________________________________
consensus             CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017A06+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF024B11+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF001G07+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF001F07+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF038D20+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF029J11+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF032B05+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF003M04+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF046J17+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMFF002A24+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF023N03+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMFF042H06+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMFF015F04+          GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
                      ____________________________________________________________
consensus             GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017A06+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF024B11+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF001G07+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF001F07+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF038D20+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF029J11+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF032B05+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF003M04+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF046J17+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMFF002A24+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF023N03+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMFF042H06+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMFF015F04+          TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
                      ____________________________________________________________
consensus             TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017A06+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF024B11+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF001G07+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF001F07+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF038D20+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF029J11+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF032B05+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF003M04+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF046J17+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMFF002A24+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF023N03+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMFF042H06+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMFF015F04+          ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
                      ____________________________________________________________
consensus             ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017A06+          CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF024B11+          CCTGAGATCAGCATCACACCCCAAGGTACCAGTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF001G07+          CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF001F07+          CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF038D20+          CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF029J11+          CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF032B05+          CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF003M04+          CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF046J17+          CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMFF002A24+          CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF023N03+          CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMFF042H06+          CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMFF015F04+          CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
                      ____________________________________________________________
consensus             CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017A06+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF024B11+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF001G07+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF001F07+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF038D20+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF029J11+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF032B05+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF003M04+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF046J17+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMFF002A24+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF023N03+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCC--
rJMFF042H06+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMFF015F04+          ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
                      ____________________________________________________________
consensus             ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017A06+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF024B11+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF001G07+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF001F07+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF038D20+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF029J11+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF032B05+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF003M04+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF046J17+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMFF002A24+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF023N03+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMFF042H06+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMFF015F04+          TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
                      ____________________________________________________________
consensus             TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017A06+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMSF024B11+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTA              
rJMSF001G07+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTAT             
rJMSF001F07+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTA              
rJMSF038D20+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMSF029J11+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMSF032B05+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMSF003M04+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMSF046J17+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMFF002A24+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMSF023N03+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMFF042H06+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMFF015F04+          TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
                      ____________________________________________________________
consensus             TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017A06+          CATGCCAATCAATTTGTACATAGTGACCA                               
rJMSF038D20+          CATGCCAATCAATTTGTACATAGTGACCAT                              
rJMSF029J11+          CATGCCAATCAATTTGTACATAGTGACCATTT                            
rJMSF032B05+          CATGCCAATCAATTTGTACATAGTGACCATTT                            
rJMSF003M04+          CATGCCAATCAATTTGTACATAGTGACCATTT                            
rJMSF046J17+          CATGCCAATCAATTTGTACATAGTGACCAT                              
rJMFF002A24+          CATGCCAATCAATTTGTACATAGTGACCATTTTCAGTAACGTCCTGGTTATAACAGTA  
rJMSF023N03+          CATGCCAATCAATTTGTACATAGTGACCATTTTCAGTAACGTCCTGGTTATAACAGTATT
rJMFF042H06+          CATGCCAATCAATTTGTACATAGTGACCATTTTCAGTAACGTCCTGGTTATAACAGTATT
rJMFF015F04+          CATGCCAATCAATTTGTACATAGTGACCATTTTCAGTAACGTCCTGGTTATAACAGTATT
                      ____________________________________________________________
consensus             CATGCCAATCAATTTGTACATAGTGACCATTTTCAGTAACGTCCTGGTTATAACAGTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF023N03+          TGATTTGATTTTTGGTAGCAGCTAGCAGTCTACAGCCTAGTATAGACTAGCAATTGTTTG
rJMFF042H06+          TGATTTGATTTTTGGT                                            
rJMFF015F04+          TGATTTGATTTTTGGTAGCAGCTAGCAGTCTACAGCCTAGTATAGACTAGCAATTGTTTG
                      ____________________________________________________________
consensus             TGATTTGATTTTTGGTAGCAGCTAGCAGTCTACAGCCTAGTATAGACTAGCAATTGTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF023N03+          GTAATTTGATTGTGTGTTTTTGATAACGCAAGAAGAAG                      
rJMFF015F04+          GTAATTTGATTGTGTGTTTTTGATAACGCAAGAAGAAGGGATTCGTCTTATTGAATTAAG
                      ____________________________________________________________
consensus             GTAATTTGATTGTGTGTTTTTGATAACGCAAGAAGAAGGGATTCGTCTTATTGAATTAAG