Contig 011018:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003N02Sequence679011018 (15)gb|ABM53871.1|5e-51IAA3 [Cestrum elegans]
JMFF010A14Sequence490000207 (8)ref|NP_001275473.1|3e-18Aux/IAA protein [Solanum tuberosum] gb|AAM29182.1| Aux/IAA protein [Solanum tube685011018 (15)gb|ABM53871.1|4e-50IAA3 [Cestrum elegans]
JMFF013A01Sequence613011018 (15)gb|ABM53871.1|2e-38IAA3 [Cestrum elegans]
JMFF014O04Sequence547000207 (8)gb|ABB55368.1|6e-31Aux/IAA protein-like [Solanum tuberosum]771011018 (15)ref|XP_009789143.1|8e-71PREDICTED: auxin-responsive protein IAA8-like [Nicotiana sylvestris]
JMFF014O20Sequence527011018 (15)gb|ABM53871.1|2e-32IAA3 [Cestrum elegans]582011018 (15)gb|ABM53871.1|4e-32IAA3 [Cestrum elegans]
JMFF025D16Sequence584000207 (8)gb|ABB55368.1|3e-50Aux/IAA protein-like [Solanum tuberosum]732011018 (15)ref|XP_009789143.1|2e-61PREDICTED: auxin-responsive protein IAA8-like [Nicotiana sylvestris]
JMFF031O04Sequence580000207 (8)gb|ABB55368.1|2e-49Aux/IAA protein-like [Solanum tuberosum]747011018 (15)ref|XP_009608764.1|4e-69PREDICTED: auxin-responsive protein IAA8-like [Nicotiana tomentosiformis]
JMFF034K17Sequence505000207 (8)gb|ABB55368.1|3e-28Aux/IAA protein-like [Solanum tuberosum]452011018 (15)
JMFF037F14Sequence531000207 (8)gb|ABB55368.1|5e-31Aux/IAA protein-like [Solanum tuberosum]761011018 (15)ref|XP_009608764.1|5e-69PREDICTED: auxin-responsive protein IAA8-like [Nicotiana tomentosiformis]
JMFS030C09Sequence633011018 (15)ref|XP_009789143.1|1e-103PREDICTED: auxin-responsive protein IAA8-like [Nicotiana sylvestris]
JMFS040D01Sequence642011018 (15)ref|XP_009789143.1|1e-103PREDICTED: auxin-responsive protein IAA8-like [Nicotiana sylvestris]
JMSF020D17Sequence752011018 (15)ref|XP_011016963.1|4e-84PREDICTED: auxin-responsive protein IAA9-like [Populus euphratica]
JMSF046F07Sequence798011018 (15)ref|XP_009789143.1|2e-100PREDICTED: auxin-responsive protein IAA8-like [Nicotiana sylvestris]796011018 (15)emb|CAC84706.1|3e-80aux/IAA protein [Populus tremula x Populus tremuloides]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS030C09- CACTGATGAGAACATTCCGAACCGAGTTGGAGGC
JMFS040D01- CACTGATGAGAACATTCCGAACCGAGTTGGAGGC
JMSF046F07- CCACTGATGAGAACATTCCGAACCGAGTTGGAGGC
                      ____________________________________________________________
consensus CCACTGATGAGAACATTCCGAACCGAGTTGGAGGC
 
. : . : . : . : . : . :
JMFS030C09- GGTGCCCCTGCAACAAA---GGCTCAGGTCGTAGGTTGGCCACCAATTAGATCTTACAGG
JMFS040D01- GGTGCCCCTGCAACAAA---GGCTCAGGTCGTAGGTTGGCCACCAATTAGATCTTACAGG
JMSF046F07- GGTGCCCCTGCAACAAACAGGGCTCAGGTCGTAGGTTGGCCACCAATTAGATCTTACAGG
rJMSF020D17+ GG
                      ____________________________________________________________
consensus GGTGCCCCTGCAACAAA---GGCTCAGGTCGTAGGTTGGCCACCAATTAGATCTTACAGG
 
. : . : . : . : . : . :
JMFS030C09- AAGAATACATTAGCTTCTACCCCAAAGAACACTGAAGAAGTTGATGGAAAAGCAGGACCT
JMFS040D01- AAGAATACATTAGCTTCTACCCCAAAGAACACTGAAGAAGTTGATGGAAAAGCAGGACCT
JMSF046F07- AAGAATACATTAGCTTCTACCCCAAAGAACACTGAAGAAGTTGATGGAAAAGCAGGACCT
rJMSF020D17+ AAGAATACATTAGCTTCTACCCCAAAGAACACTGAAGAAGTTGATGGAAAAGCAGGACCT
rJMSF046F07+ CAAAGAACACTGAAGAAGTTGATGGAAAAGCAGGACCT
                      ____________________________________________________________
consensus AAGAATACATTAGCTTCTACCCCAAAGAACACTGAAGAAGTTGATGGAAAAGCAGGACCT
 
. : . : . : . : . : . :
JMFS030C09- GGTGCCCTTTTTATTAAGGTCAGCATGGATGGTGCTCCTTATCTGAGGAAAGTGGACCTG
JMFS040D01- GGTGCCCTTTTTATTAAGGTCAGCATGGATGGTGCTCCTTATCTGAGGAAAGTGGACCTG
JMSF046F07- GGTGCCCTTTTTATTAAGGTCAGCATGGATGGTGCTCCTTATCTGAGGAAAGTGGACCTG
rJMSF020D17+ GGTGCCCTTTTTATTAAGGTCAGCATGGATGGTGCTCCTTATCTGAGGAAAGTGGACCTG
rJMSF046F07+ GGTGCCCTTTTTATTAAGGTCAGCATGGATGGTGCTCCTTATCTGAGGAAAGTGGACCTG
rJMFF037F14+ TAAGGTCAGCATGGATGGTGCTCCTTATCTGAGGAAAGTGGACCTG
rJMFF031O04+ TTAAGGTCAGCATGGATGGTGCTCCTTATCTGAGGAAAGTGGACCTG
rJMFF025D16+ GAGGAAAGTGGACCTG
rJMFF014O04+ TTTATTAAGGTCAGCATGGATGGTGCTCCTTATCTGAGGAAAGTGGACCTG
                      ____________________________________________________________
consensus GGTGCCCTTTTTATTAAGGTCAGCATGGATGGTGCTCCTTATCTGAGGAAAGTGGACCTG
 
. : . : . : . : . : . :
JMFS030C09- AGAATGTACTCTGCATACCAGGAACTCTCTTCTGCTCTTGAAAAGATGTTCAGCTGCTTT
JMFS040D01- AGAATGTACTCTGCATACCAGGAACTCTCTTCTGCTCTTGAAAAGATGTTCAGCTGCTTT
JMSF046F07- AGAATGTACTCTGCATACCAGGAACTCTCTTCTGCTCTTGAAAAGATGTTCAGCTGCTTT
rJMSF020D17+ AGAATGTACTCTGCATACCAGGAACTCTCTTCTGCTCTTGAAAAGATGTTCAGCTGCTTT
rJMSF046F07+ AGAATGTACTCTGCATACCAGGAACTCTCTTCTGCTCTTGAAAAGATGTTCAGCTGCTTT
rJMFF037F14+ AGAATGTACTCTGCATACCAGGAACTCTCTTCTGCTCTTGAAAAGATGTTCAGCTGCTTT
rJMFF031O04+ AGAATGTACTCTGCATACCAGGAACTCTCTTCTGCTCTTGAAAAGATGTTCAGCTGCTTT
rJMFF003N02+ GCTCTTGAAAAGATGTTCAGCTGCTTT
rJMFF025D16+ AGAATGTACTCTGCATACCAGGAACTCTCTTCTGCTCTTGAAAAGATGTTCAGCTGCTTT
rJMFF010A14+ CTCTTGAAAAGATGTTCAGCTGCTTT
rJMFF014O04+ AGAATGTACTCTGCATACCAGGAACTCTCTTCTGCTCTTGAAAAGATGTTCAGCTGCTTT
                      ____________________________________________________________
consensus AGAATGTACTCTGCATACCAGGAACTCTCTTCTGCTCTTGAAAAGATGTTCAGCTGCTTT
 
. : . : . : . : . : . :
JMFS030C09- ACCATTGGTCAATATGGTGCTCATGGAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
JMFS040D01- ACCATTGGTCAATATGGTGCTCATGGAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
JMSF046F07- ACCATTGGTCAATATGGTGCTCATGGAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
rJMSF020D17+ ACCATTGGTCAATATGGTGCTCATGGAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
rJMFF013A01+ GAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
rJMSF046F07+ ACCATTGGTCAATATGGTGCTCATGGAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
rJMFF037F14+ ACCATTGGTCAATATGGTGCTCATGGAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
rJMFF031O04+ ACCATTGGTCAATATGGTGCTCATGGAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
rJMFF003N02+ ACCATTGGTCAATATGGTGCTCATGGAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
rJMFF025D16+ ACCATTGGTCAATATGGTGCTCATGGAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
rJMFF010A14+ ACCATTGGTCAATATGGTGCTCATGGAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
JMFF014O20- AT
rJMFF014O20+ AT
rJMFF014O04+ ACCATTGGTCAATATGGTGCTCATGGAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
                      ____________________________________________________________
consensus ACCATTGGTCAATATGGTGCTCATGGAAATGAGATTTTAAGTGAGAGCAAATTGAAGGAT
 
. : . : . : . : . : . :
JMFS030C09- TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
JMFS040D01- TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
JMSF046F07- TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
rJMSF020D17+ TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
rJMFF013A01+ TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
rJMSF046F07+ TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
rJMFF037F14+ TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
rJMFF031O04+ TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
rJMFF003N02+ TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
rJMFF025D16+ TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
rJMFF010A14+ TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
JMFF014O20- TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
rJMFF014O20+ TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
rJMFF014O04+ TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
                      ____________________________________________________________
consensus TTGCTTCATGGATCTGAATATGTCCTCACTTATGAGGATAAGGATGGCGATTGGATGCTT
 
. : . : . : . : . : . :
JMFS030C09- GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
JMFS040D01- GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
JMSF046F07- GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
rJMSF020D17+ GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
rJMFF013A01+ GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
rJMSF046F07+ GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
rJMFF037F14+ GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
rJMFF031O04+ GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
rJMFF003N02+ GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
rJMFF025D16+ GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
rJMFF010A14+ GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
JMFF014O20- GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
rJMFF014O20+ GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
rJMFF014O04+ GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
                      ____________________________________________________________
consensus GTTGGTGATGTTCCTTGGGAGATGTTCATTGATACCTGTAAGAGGCTTAGAATCATGAAG
 
. : . : . : . : . : . :
JMFS030C09- GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
JMFS040D01- GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
JMSF046F07- GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
rJMSF020D17+ GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
rJMFF013A01+ GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
rJMSF046F07+ GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
rJMFF034K17+ TGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
rJMFF037F14+ GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
rJMFF031O04+ GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
rJMFF003N02+ GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
rJMFF025D16+ GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
rJMFF010A14+ GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
JMFF014O20- GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
rJMFF014O20+ GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
rJMFF014O04+ GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
                      ____________________________________________________________
consensus GGTTCGGATGCCATTGGACTGGCCCCAAGGGCCATGGAAAAATGCCGAACCAGGGTATAA
 
. : . : . : . : . : . :
JMFS030C09- GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
JMFS040D01- GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
JMSF046F07- GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
rJMSF020D17+ GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
rJMFF013A01+ GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
rJMSF046F07+ GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
rJMFF034K17+ GTAATATCTGCACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
rJMFF037F14+ GTAATATCTGCACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
rJMFF031O04+ GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
rJMFF003N02+ GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
rJMFF025D16+ GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
rJMFF010A14+ GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
JMFF014O20- GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
rJMFF014O20+ GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
rJMFF014O04+ GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
                      ____________________________________________________________
consensus GTAATATCTACACATGATTGAAGCTATCCATCCATCCGACAGATATCACACAGAGGAAGC
 
. : . : . : . : . : . :
JMFS030C09- CATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
JMFS040D01- AATGGGTGATCTTANAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
JMSF046F07- AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
rJMSF020D17+ AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
rJMFF013A01+ AATGGGTGATCTTAAAACTTGATCCTTGTTTGAATTGATACACTCACCGACTGGATGTTG
rJMSF046F07+ AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
rJMFF034K17+ AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
rJMFF037F14+ AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
rJMFF031O04+ AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
rJMFF003N02+ AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
rJMFF025D16+ AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
rJMFF010A14+ AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
JMFF014O20- AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
rJMFF014O20+ AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
rJMFF014O04+ AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
                      ____________________________________________________________
consensus AATGGGTGATCTTAAAACTTGATCCTTGTTTGAGTTGATACACTCACCGACTGGATGTTG
 
. : . : . : . : . : . :
JMFS030C09- GC
JMFS040D01- GCTTTGGATAG
JMSF046F07- GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
rJMSF020D17+ GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
rJMFF013A01+ GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
rJMSF046F07+ GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
rJMFF034K17+ GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
rJMFF037F14+ GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
rJMFF031O04+ GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
rJMFF003N02+ GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
rJMFF025D16+ GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
rJMFF010A14+ GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
JMFF014O20- GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
rJMFF014O20+ GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
rJMFF014O04+ GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
                      ____________________________________________________________
consensus GCTTTGGATAGCACATCATGGGTAGATGGTTTACCTTGTTGTTATATTTACATTCTCGTA
 
. : . : . : . : . : . :
JMSF046F07- ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
rJMSF020D17+ ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
rJMFF013A01+ ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
rJMSF046F07+ ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
rJMFF034K17+ ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
rJMFF037F14+ ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
rJMFF031O04+ ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
rJMFF003N02+ ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
rJMFF025D16+ ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
rJMFF010A14+ ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
JMFF014O20- ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
rJMFF014O20+ ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
rJMFF014O04+ ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
                      ____________________________________________________________
consensus ATTGATGTTACCTAAGCTTTGCATCCTGTCTAATACGGAGAACTTGCTAGAACCCTTCTG
 
. : . : . : . : . : . :
JMSF046F07- GGAGTTCATCTTANACTCGCAATGTGTGGGGTGAATTTGTGAG
rJMSF020D17+ GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAATAG
rJMFF013A01+ GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAATAG
rJMSF046F07+ GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAATAG
rJMFF034K17+ GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAATAG
rJMFF037F14+ GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAATAG
rJMFF031O04+ GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAATAG
rJMFF003N02+ GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAATAG
rJMFF025D16+ GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAATAG
rJMFF010A14+ GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAGTAG
JMFF014O20- GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAATAG
rJMFF014O20+ GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAATAG
rJMFF014O04+ GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAATAG
                      ____________________________________________________________
consensus GGAGTTCATCTTAGACTCGCAATGTGTGGGGTGAATTTGTGAGTTCATTTAGATGAATAG
 
. : . : . : . : . : . :
rJMSF020D17+ TATTAGTATGTAAAGCGGATTGTTGAACTT
rJMFF013A01+ TATTAGTATGTAAAGCGGATTGTTGAACTTTATGTGTGTACTCAAGTACTAAGTTTTCTG
rJMSF046F07+ TATTAGTATGTAAAGCGGATTGTTGAACTTTATGTGTGTACTCAAGTACTAAGTTTTCTG
rJMFF034K17+ TATTAGTATGTAAAGCGGATTGTTGAACTTTATGTGTGTACTCAAGTACTAAGTTTTCTG
rJMFF037F14+ TATTAGTATGTAAAGCGGATTGTTGAACTTTATGTGTGTACTCAAGTACTAAGTTTTCTG
rJMFF031O04+ TATTAGTATGTAAAGCGGATTGTTGAACTTTATGTGTGTACTCAAGTACTAAGTTTTCTG
rJMFF003N02+ TATTAGTATGTAAAGCGGATTGTTGAACTTTATGTGTGTACTCAAGTACTAAGTTTTCTG
rJMFF025D16+ TATTAGTATGTAAAGCGGATTGTTGAACTTTATGTGTGTACTCAAGTACTAAGTTTTCTG
rJMFF010A14+ TATTAGTATGTAAAGCGGATTGTTGAACTTTATGTGTGTACTCAAGTACTAAGTTTTCTG
JMFF014O20- TATTAGTATGTAAAGCGGATTGTTGAACTTTATGTGTGTACTCAA
rJMFF014O20+ TATTAGTATGTAAAGCGGATTGTTGAACTTTATGTGTGTACTCAAGTACTAAGTTTTCTG
rJMFF014O04+ TATTAGTATGTAAAGCGGATTGTTGAACTTTATGTGTGTACTCAAGTACTAAGTTTTCTG
                      ____________________________________________________________
consensus TATTAGTATGTAAAGCGGATTGTTGAACTTTATGTGTGTACTCAAGTACTAAGTTTTCTG
 
. : . : . : . : . : . :
rJMFF013A01+ TTAGCTTGATTCCTCAGTCTGTGCACCAAAACACCAAG
rJMSF046F07+ TTAGCTTGATTCCTCAGTCTGTGCACCAAAACACCAAG
rJMFF034K17+ TTAGCTTGATTCCTCAGTCTGTGCACCAAAACACCAAGTTTCTTTACTTT
rJMFF037F14+ TTAGCTTGATTCCTCAGTCTGTGCACCAAAACACCAAGTTTCTTTACTTTGCATA
rJMFF031O04+ TTAGCTTGATTCCTCAGTCTGTGCACCAAAACACCAAGTT
rJMFF003N02+ TTAGCTTGATTCCTCAGTCTGTGCACCAAAACACCAAGTTTCTTTACTTTGC
rJMFF025D16+ TTAGCTTGATTCCTCAGTCTGTGCACCAAAACACCAAGTTTCTTTACTTTGCATA
rJMFF010A14+ TTAGCTTGATTCCTCAGTCTGTGCACCAAAACACCAAGTTTCTTTACTTTGCATA
rJMFF014O20+ TTAGCTTGATTCCTCAGTCTGTGCACCAAAACACCAAGTT
rJMFF014O04+ TTAGCTTGATTCCTCAGTCTGTGCACCAAAACACCAAGTTTCTTTACTTTGCATAGAATA
                      ____________________________________________________________
consensus TTAGCTTGATTCCTCAGTCTGTGCACCAAAACACCAAGTTTCTTTACTTTGCATAGAATA