| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014M04 | Sequence | 502 | 003495 (25) | ref|XP_011073820.1| | 3e-23 | PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase A | 746 | 011016 (8) | emb|CAN70282.1| | 8e-103 | hypothetical protein VITISV_023081 [Vitis vinifera] |
| JMFF047P24 | Sequence | 566 | 003495 (25) | ref|XP_011073820.1| | 2e-55 | PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase A | 150 | 011016 (8) | |||
| JMFN016J06 | Sequence | 608 | 011016 (8) | emb|CAN70282.1| | 1e-115 | hypothetical protein VITISV_023081 [Vitis vinifera] | |||||
| JMFS078C07 | Sequence | 614 | 011016 (8) | emb|CDP14623.1| | 2e-99 | unnamed protein product [Coffea canephora] | |||||
| JMFS128A09 | Sequence | 635 | 011016 (8) | ref|XP_009589224.1| | 7e-71 | PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase A | |||||
| JMFS164D06 | Sequence | 512 | 011016 (8) | ref|XP_004247993.1| | 3e-68 | PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase A | |||||
| JMSF011D23 | Sequence | 386 | 003495 (25) | ref|XP_006395381.1| | 4e-16 | hypothetical protein EUTSA_v10003580mg [Eutrema salsugineum] gb|ESQ32667.1| hypo | 682 | 011016 (8) | emb|CAN70282.1| | 3e-115 | hypothetical protein VITISV_023081 [Vitis vinifera] |
| JMSF043P17 | Sequence | 721 | 003495 (25) | ref|XP_011073820.1| | 2e-55 | PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase A | 546 | 011016 (8) | ref|XP_006364689.1| | 1e-83 | PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase A |
This contig is upended
. : . : . : . : . : . :
JMFS128A09- AGTGCGTTAATTGGGGAGATTCC
____________________________________________________________
consensus AGTGCGTTAATTGGGGAGATTCC
. : . : . : . : . : . :
JMFS128A09- AGAGGATATATGTGAATCTGGCAGCCTGGGAATTCTGCAGCTTGATGGGAATTCATTGAC
____________________________________________________________
consensus AGAGGATATATGTGAATCTGGCAGCCTGGGAATTCTGCAGCTTGATGGGAATTCATTGAC
. : . : . : . : . : . :
JMFS128A09- TGGCACTATTCCTCCTCAGATTGGAAATTGCTCCTCTCTCACCTTGCTGAGCTTATCACA
____________________________________________________________
consensus TGGCACTATTCCTCCTCAGATTGGAAATTGCTCCTCTCTCACCTTGCTGAGCTTATCACA
. : . : . : . : . : . :
JMFS128A09- CAATAATTTAAGTGGCACCATACCTGAGACCCTTTCAATGCTGAAAAGGCTGAAGATTCT
____________________________________________________________
consensus CAATAATTTAAGTGGCACCATACCTGAGACCCTTTCAATGCTGAAAAGGCTGAAGATTCT
. : . : . : . : . : . :
JMFS128A09- GAAGCTAGAGGTTAACCAACTGAGTGGAGAAATACCCCAACAGCTGGGCAAACTGGAAAA
____________________________________________________________
consensus GAAGCTAGAGGTTAACCAACTGAGTGGAGAAATACCCCAACAGCTGGGCAAACTGGAAAA
. : . : . : . : . : . :
JMFS128A09- CCTTCTGGCAGTGAATGTATCCTACAACAGGCTCACAGGCCGGCTTCCGGCTGGGAGTAT
____________________________________________________________
consensus CCTTCTGGCAGTGAATGTATCCTACAACAGGCTCACAGGCCGGCTTCCGGCTGGGAGTAT
. : . : . : . : . : . :
JMFS128A09- ATTCCAGAATCTAGACTCCAGTGCAATAGAGGGGAATGATGGGATTTGTTCCCCCTTATT
____________________________________________________________
consensus ATTCCAGAATCTAGACTCCAGTGCAATAGAGGGGAATGATGGGATTTGTTCCCCCTTATT
. : . : . : . : . : . :
JMFS128A09- GACAGGACCCTGCAAAATGAATGCCCCAAAACCTATAGTCATCAACCCCTTTGTTTATGG
____________________________________________________________
consensus GACAGGACCCTGCAAAATGAATGCCCCAAAACCTATAGTCATCAACCCCTTTGTTTATGG
. : . : . : . : . : . :
JMFS128A09- AAACCAGACTGACAATAATAATGGGGGGGATAATAATGAGCCTCTGGCAAGTACCAGGAA
____________________________________________________________
consensus AAACCAGACTGACAATAATAATGGGGGGGATAATAATGAGCCTCTGGCAAGTACCAGGAA
. : . : . : . : . : . :
JMFS128A09- CTCAAGGCACCATAGATTCCTCAGTGTTTCAGCCATAGTTGCAATCTCAGCTGCAGCCAT
____________________________________________________________
consensus CTCAAGGCACCATAGATTCCTCAGTGTTTCAGCCATAGTTGCAATCTCAGCTGCAGCCAT
. : . : . : . : . : . :
JMFS128A09- CATTGCAGTTGGTGTGATGGTGATAACCATGGTGAATGCCTCGGTTAGGAGGCGGATTTC
JMFS078C07- ACCATGGTGAATGCCTCGGTTAGGAGGCGGATTTC
____________________________________________________________
consensus CATTGCAGTTGGTGTGATGGTGATAACCATGGTGAATGCCTCGGTTAGGAGGCGGATTTC
. : . : . : . : . : . :
JMFS128A09- GTTCGTGGAAAA
JMFS078C07- GTTCGTGGAAAACGCGTTGGAGAGCATGTGCTCCTCCACCTCTTCAAGGTCCCAAGGCAT
____________________________________________________________
consensus GTTCGTGGAAAACGCGTTGGAGAGCATGTGCTCCTCCACCTCTTCAAGGTCCCAAGGCAT
. : . : . : . : . : . :
JMFS078C07- GGCTACTGGGAAGCTGATCCTATTCGACACGAAATCGTCCCCGGATTGGGCGAGCAGCAC
____________________________________________________________
consensus GGCTACTGGGAAGCTGATCCTATTCGACACGAAATCGTCCCCGGATTGGGCGAGCAGCAC
. : . : . : . : . : . :
JMFS078C07- CTTCGAATCGGTGCTGAACAAGGCATCAGAAATCGGGGAAGGCGTTTTCGGGACCGTTTA
____________________________________________________________
consensus CTTCGAATCGGTGCTGAACAAGGCATCAGAAATCGGGGAAGGCGTTTTCGGGACCGTTTA
. : . : . : . : . : . :
JMFS078C07- CAAGGCTCCACTGGGAGGTGAAGGCAGCAGAGTGGTGGCAATAAAGAAGCTCACAAGCTC
____________________________________________________________
consensus CAAGGCTCCACTGGGAGGTGAAGGCAGCAGAGTGGTGGCAATAAAGAAGCTCACAAGCTC
. : . : . : . : . : . :
JMFS078C07- AAAGATTTTGCAGTACCCGGAGGACTTTGATCGCGAGGTTCGAGTTCTGGGGAAAGCCAG
____________________________________________________________
consensus AAAGATTTTGCAGTACCCGGAGGACTTTGATCGCGAGGTTCGAGTTCTGGGGAAAGCCAG
. : . : . : . : . : . :
JMFS078C07- GCACCAGAATTTGGTCCCCTTGAGAGGCTATTACTGGACTCCTCAGCTCCAGCTTTTAGT
____________________________________________________________
consensus GCACCAGAATTTGGTCCCCTTGAGAGGCTATTACTGGACTCCTCAGCTCCAGCTTTTAGT
. : . : . : . : . : . :
JMFS078C07- TTCAGATTTTGTGCCATTAGGGAACTTGGAATCAAAGCTCCATGAAATGGCAATGGCAAT
JMFN016J06- T
rJMSF011D23+ T
____________________________________________________________
consensus TTCAGATTTTGTGCCATTAGGGAACTTGGAATCAAAGCTCCATGAAATGGCAATGGCAAT
. : . : . : . : . : . :
JMFS078C07- GGCAACTCCTCCATTAACATGGGCAGTTAGGTTCAAGATTATATTGGGAACTGCAAA-GG
JMFN016J06- GGCAACTCCTCCATTAACATGGGCAGTTAGGTTCAAGATTATATTGGGAACTGCAAA-GG
rJMSF011D23+ GGCAACTCCTCCATTAACATGGGCAGTTAGGTTCAAGATTATATTGGGAACTGCAAA-GG
rJMFF014M04+ AAGATTATATTGGGAACTGCAAAGGG
____________________________________________________________
consensus GGCAACTCCTCCATTAACATGGGCAGTTAGGTTCAAGATTATATTGGGAACTGCAAA-GG
. : . : . : . : . : . :
JMFS078C07- GGCTAGCACATTTGCACCATTCTTGCCAGCCCCCAATCATACACTACAACATCAAGCCCA
JMFN016J06- GGCTAGCACATTTGCACCATTCTTGCCAGCCCCCAATCATACACTACAACATCAAGCCCA
rJMSF011D23+ GGCTAGCACATTTGCACCATTCTTGCCAGCCCCCAATCATACACTACAACATCAAGCCCA
rJMFF014M04+ GGCTAGCACATTTGCACCATTCTTGCCAGCCCCCAATCATACACTACAACATCAAGCCCA
____________________________________________________________
consensus GGCTAGCACATTTGCACCATTCTTGCCAGCCCCCAATCATACACTACAACATCAAGCCCA
. : . : . : . : . : . :
JMFS078C07- GCAATATTCTCCTGGACGAAAACCTGAACCCGAAAATCTC
JMFN016J06- GCAATATTCTCCTGGACGAAAACCTGAACCCGAAAATCTCAGACTTCGGGCTGGCAAGGC
rJMSF043P17+ CCCGAAAATCTCAGACTTCGGGCTGGCAAGGC
rJMSF011D23+ GCAATATTCTCCTGGACGAAAACCTGAACCCGAAAATCTCAGACTTCGGGCTGGCAAGGC
rJMFF014M04+ GCAATATTCTCCTGGACGAAAACCTGAACCCGAAAATCTCAGACTTCGGGCTGGCAAGGC
____________________________________________________________
consensus GCAATATTCTCCTGGACGAAAACCTGAACCCGAAAATCTCAGACTTCGGGCTGGCAAGGC
. : . : . : . : . : . :
JMFN016J06- TGGTGGCAAAGCTGGACAGGCACGTGATGAGCAACCGGTTCCAGGCGGCGATAGGGTACG
rJMSF043P17+ TGGTGGCAAAGCTGGACAGGCACGTGATGAGCAACCGGTTCCAGGCGGCGATAGGGTACG
rJMSF011D23+ TGGTGGCAAAGCTGGACAGGCACGTGATGAGCAACCGGTTCCAGGCGGCGATAGGGTACG
JMFS164D06- CGGCGATAGGGTACG
rJMFF014M04+ TGGTGGCAAAGCTGGACAGGCACGTGATGAGCAACCGGTTCCAGGCGGCGATAGGGTACG
____________________________________________________________
consensus TGGTGGCAAAGCTGGACAGGCACGTGATGAGCAACCGGTTCCAGGCGGCGATAGGGTACG
. : . : . : . : . : . :
JMFN016J06- TGGCGCCCGAGCTGGCGTGCCAGAGCCTGAGAGTGAACGAGAAGTGCGACGTGTATGGGT
rJMSF043P17+ TGGCGCCCGAGCTGGCGTGCCAGAGCCTGAGAGTGAACGAGAAGTGCGACGTGTATGGGT
rJMSF011D23+ TGGCGCCCGAGCTGGCGTGCCAGAGCCTGAGAGTGAACGAGAAGTGCGACGTGTATGGGT
JMFS164D06- TGGCGCCCGAGCTGGCGTGCCAGAGCCTGAGAGTGAACGAGAAGTGCGACGTGTATGGGT
rJMFF014M04+ TGGCGCCCGAGCTGGCGTGCCAGAGCCTGAGAGTGAACGAGAAGTGCGACGTGTATGGGT
____________________________________________________________
consensus TGGCGCCCGAGCTGGCGTGCCAGAGCCTGAGAGTGAACGAGAAGTGCGACGTGTATGGGT
. : . : . : . : . : . :
JMFN016J06- TCGGGATGCTGATACTGGAGATTGTGACGGGGAGGAGGCCGGTGGAGTATGGGGAGGACA
rJMSF043P17+ TCGGGATGCTGATACTGGAGATTGTGACGGGGAGGAGGCCGGTGGAGTATGGGGAGGACA
rJMSF011D23+ TCGGGATGCTGATACTGGAGATTGTGACGGGGAGGAGGCCGGTGGAGTATGGGGAGGACA
JMFS164D06- TCGGGATGCTGATACTGGAGATTGTGACGGGGAGGAGGCCGGTGGAGTATGGGGAGGACA
rJMFF014M04+ TCGGGATGCTGATACTGGAGATTGTGACGGGGAGGAGGCCGGTGGAGTATGGGGAGGACA
____________________________________________________________
consensus TCGGGATGCTGATACTGGAGATTGTGACGGGGAGGAGGCCGGTGGAGTATGGGGAGGACA
. : . : . : . : . : . :
JMFN016J06- ATGTTTTGATCCTGAATGATCATGTGAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGAGT
rJMSF043P17+ ATGTTTTGATCCTGAATGATCATGTGAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGAGT
rJMSF011D23+ ATGTTTTGATCCTGAATGATCATGTGAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGAGT
JMFS164D06- ATGTTTTGATCCTGAATGATCATGTGAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGAGT
rJMFF014M04+ ATGTTTTGATCCTGAATGATCATGTGAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGAGT
____________________________________________________________
consensus ATGTTTTGATCCTGAATGATCATGTGAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGAGT
. : . : . : . : . : . :
JMFN016J06- GTGTGGATCAGGGGATGGGTGGGTACCCTGATGAGGAAGTGTTGCCTGTTTTGAAGCTGG
rJMSF043P17+ GTGTGGATCAGGGGATGGGTGGGTACCCTGATGAGGAAGTGTTGCCTGTTTTGAAGCTGG
rJMSF011D23+ GTGTGGATCAGGGGATGGGTGGGTACCCTGATGAGGAAGTGTTGCCTGTTTTGAAGCTGG
JMFS164D06- GTGTGGATCAGGGGATGGGTGGGTACCCTGATGAGGAAGTGTTGCCTGTTTTGAAGCTGG
rJMFF014M04+ GTGTGGATCAGGGGATGGGTGGGTACCCTGATGAGGAAGTGTTGCCTGTTTTGAAGCTGG
____________________________________________________________
consensus GTGTGGATCAGGGGATGGGTGGGTACCCTGATGAGGAAGTGTTGCCTGTTTTGAAGCTGG
. : . : . : . : . : . :
JMFN016J06- CTTTGGTGTGTACTTCCCAGATACCTTCGAGCAGGCCTTCCATGGCGGAAGTGGTGCAGA
rJMSF043P17+ CTTTGGTGTGTACTTCCCAGATACCTTCGAGCAGGCCTTCCATGGCGGAAGTGGTGCAGA
rJMSF011D23+ CTTTGGTGTGTACTTCCCAGATACCTTCGAGCAGGCCTTCCATGGCGGAAGTGGTGCAGA
JMFS164D06- CTTTGGTGTGTACTTCCCAGATACCTTCGAGCAGGCCTTCCATGGCGGAAGTGGTGCAGA
rJMFF014M04+ CTTTGGTGTGTACTTCCCAGATACCTTCGAGCAGGCCTTCCATGGCGGAAGTGGTGCAGA
____________________________________________________________
consensus CTTTGGTGTGTACTTCCCAGATACCTTCGAGCAGGCCTTCCATGGCGGAAGTGGTGCAGA
. : . : . : . : . : . :
JMFN016J06- TCTTGCAGGTTATCAAGACTCCTGTTCCAAACAGAATGGAACCATACTGAGCCTCAGCCT
rJMSF043P17+ TCTTGCAGGTTATCAAGACTCCTGTTCCAAACAGAATGGAACCATACTGAGCCTCAGCCT
rJMSF011D23+ TCTTGCAGGTTATCAAGACTCCTGTTCCAAACAGAATGGAACCATACTGAGCCTCAGCCT
rJMFF047P24+ TACTGAGCCTCAGCCT
JMFS164D06- TCTTGCAGGTTATCAAGACTCCTGTTCCAAACAGAATGGAACCATACTGAGCCTCAGCCT
rJMFF014M04+ TCTTGCAGGTTATCAAGACTCCTGTTCCAAACAGAATGGAACCATACTGAGCCTCAGCCT
____________________________________________________________
consensus TCTTGCAGGTTATCAAGACTCCTGTTCCAAACAGAATGGAACCATACTGAGCCTCAGCCT
. : . : . : . : . : . :
JMFN016J06- CTGGACTG
rJMSF043P17+ CTGGACTGGAGTCTGGAAATATTCTTGAATTCACTTAAGCTTAGCTAGCATATATTTTTC
rJMSF011D23+ CTGGACTGGAGTCTGGAAATATTCTTGAATTCACTTAAGCTTAGCTAGCATATATTTTTC
rJMFF047P24+ CTGGACTGGAGTCTGGAAATATTCTTGAATTCACTTAAGCTTAGCTAGCATATATTTTTC
JMFS164D06- CTGGACTGGAGTCTGGAAATATTCTTGAATTCACTTAAGCTTAGCTAGCATATATTTTTC
rJMFF014M04+ CTGGACTGGAGTCTGGAAATATTCTTGAATTCACTTAAGCTTAGCTAGCATATATTTTTC
____________________________________________________________
consensus CTGGACTGGAGTCTGGAAATATTCTTGAATTCACTTAAGCTTAGCTAGCATATATTTTTC
. : . : . : . : . : . :
rJMSF043P17+ CGACATCCC
rJMSF011D23+ CGACATCCCAGTCTT
rJMFF047P24+ CGACATCCCAGTCTTTGTTCTTTTATTCTCTTGGTTTGGACGTTATAATATAAAATAATT
JMFS164D06- CGACATCCCAGTCTTTGTTCTTTTATTCTCTTGGTTTGGACGTTATAATATAATATAATT
rJMFF014M04+ CGACATCCCAGTCTTTGTTCTTTTATTCTCTTGGTTTGGACGTTATAATATAATATAATT
____________________________________________________________
consensus CGACATCCCAGTCTTTGTTCTTTTATTCTCTTGGTTTGGACGTTATAATATAATATAATT
. : . : . : . : . : . :
rJMFF047P24+ GCTTTGGTAATTGT
JMFS164D06- GCTTTGGTAATTGT
rJMFF014M04+ GCTTTGGTAATTGTATCATCACTCGTTCCGCTTGCTTACTTTGTAACATTTAGAATCACC
____________________________________________________________
consensus GCTTTGGTAATTGTATCATCACTCGTTCCGCTTGCTTACTTTGTAACATTTAGAATCACC