| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014C24 | Sequence | 554 | 007900 (5) | ref|XP_009595596.1| | 77.4 | PREDICTED: uncharacterized protein LOC104091859 [Nicotiana tomentosiformis] | 815 | 011012 (6) | ref|XP_009763845.1| | 109 | PREDICTED: uncharacterized protein LOC104215685 [Nicotiana sylvestris] |
| JMFF028C22 | Sequence | 549 | 007900 (5) | ref|XP_009595596.1| | 75.9 | PREDICTED: uncharacterized protein LOC104091859 [Nicotiana tomentosiformis] | 735 | 011012 (6) | ref|XP_006344428.1| | 57.0 | PREDICTED: uncharacterized protein LOC102597060 [Solanum tuberosum] |
| JMSF020C14 | Sequence | 630 | 007900 (5) | ref|XP_009763845.1| | 105 | PREDICTED: uncharacterized protein LOC104215685 [Nicotiana sylvestris] | 794 | 011012 (6) | ref|XP_006344428.1| | 198 | PREDICTED: uncharacterized protein LOC102597060 [Solanum tuberosum] |
| JMSF020D14 | Sequence | 769 | 011012 (6) | ref|XP_006344428.1| | 192 | PREDICTED: uncharacterized protein LOC102597060 [Solanum tuberosum] | |||||
| JMSF021C14 | Sequence | 628 | 007900 (5) | ref|XP_009763845.1| | 111 | PREDICTED: uncharacterized protein LOC104215685 [Nicotiana sylvestris] | 717 | 011012 (6) | ref|XP_009595596.1| | 172 | PREDICTED: uncharacterized protein LOC104091859 [Nicotiana tomentosiformis] |
| JMSF024N24 | Sequence | 674 | 007900 (5) | ref|XP_009763845.1| | 127 | PREDICTED: uncharacterized protein LOC104215685 [Nicotiana sylvestris] | 706 | 011012 (6) | ref|XP_006344428.1| | 219 | PREDICTED: uncharacterized protein LOC102597060 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF020D14+ TTCAAAAGAG
rJMSF024N24+ TTCGTACCCTTTTACCTGGCTGTTAATTTAGTTTATGGAGCTGAAGTTTCAAAAGAG
rJMSF020C14+ TTCGTACCCTTTTACCTGGCTGTTAATTTAGTTTA-NGAGCTGAAGTTTCAAAAGAG
____________________________________________________________
consensus TTCGTACCCTTTTACCTGGCTGTTAATTTAGTTTATGGAGCTGAAGTTTCAAAAGAG
. : . : . : . : . : . :
rJMSF020D14+ TTGATGCCATTATGGATTCTTGGACCATTTGTTGTTGCATTGTATATTAAGATGCTCCAA
rJMSF021C14+ TGGACCATTTGTTGTTGCATTGTATATTAAGATGCTCCAA
rJMSF024N24+ TTGATGCCATTATGGATTCTTGGACCATTTGTTGTTGCATTGTATATTAAGATGCTCCAA
rJMSF020C14+ TTGATGCCATTATGGATTCTTGGACCATTTGTTGTTGCATTGTATATTAAGATGCTCCAA
____________________________________________________________
consensus TTGATGCCATTATGGATTCTTGGACCATTTGTTGTTGCATTGTATATTAAGATGCTCCAA
. : . : . : . : . : . :
rJMSF020D14+ GGCATTTGTGCACTTTACGTATTCTGTTTCAAGCAGACAGTAAGAGTCGTCAAGAACTTC
rJMSF021C14+ GGCATTTGTGCACTTTACGTATTCTGTTTCAAGCAGACAGTAAGAGTCGTCAAGAACTTC
rJMSF024N24+ GGCATTTGTGCACTTTACGTATTCTGTTTCAAGCAGACAGTAAGAGTCGTCAAGAACTTC
rJMSF020C14+ GGCATTTGTGCACTTTACGTATTCTGTTTCAAGCAGACAGTAAGAGTCGTCAAGAACTTC
____________________________________________________________
consensus GGCATTTGTGCACTTTACGTATTCTGTTTCAAGCAGACAGTAAGAGTCGTCAAGAACTTC
. : . : . : . : . : . :
rJMSF020D14+ CCAACGTACTACATGTTGGCTAATGAATATATTGTTCAAGGGAAGATCAAGGAAGAAATC
rJMSF021C14+ CCAACGTACTACATGTTGGCTAATGAATATATNGTTCAAGGGAAGATCAAGGAAGAAATC
rJMSF024N24+ CCAACGTACTACATGTTGGCTAATGAATATATTGTTCAAGGGAAGATCAAGGAAGAAATC
rJMSF020C14+ CCAACGTACTACATGTTGGCTAATGAATATATTGTTCAAGGGAAGATCAAGGAAGAAATC
rJMFF014C24+ TGAATATATTGTTCAAGGGAAGATCAAGGAAGAAATC
____________________________________________________________
consensus CCAACGTACTACATGTTGGCTAATGAATATATTGTTCAAGGGAAGATCAAGGAAGAAATC
. : . : . : . : . : . :
rJMSF020D14+ AGAGCACGCTTTTTGCAGCCTGTGTTAGATATTAAGAACATAGACTACAAAGAGGTAGCA
rJMSF021C14+ AGAGCACGCTTTTTGCAGCCTGTGTTAGATATTAAGAACATAGACTACAAAGAGGTAGCA
rJMSF024N24+ AGAGCACGCTTTTTGCAGCCTGTGTTAGATATTAAGAACATAGACTACAAAGAGGTAGCA
rJMSF020C14+ AGAGCACGCTTTTTGCAGCCTGTGTTAGATATTAAGAACATAGACTACAAAGAGGTAGCA
rJMFF028C22+ CTACAAAGAGGTAGCA
rJMFF014C24+ AGAGCACGCTTTTTGCAGCCTGTGTTAGATATTAAGAACATAGACTACAAAGAGGTAGCA
____________________________________________________________
consensus AGAGCACGCTTTTTGCAGCCTGTGTTAGATATTAAGAACATAGACTACAAAGAGGTAGCA
. : . : . : . : . : . :
rJMSF020D14+ AAAAGTAGGATGGAGGATTT-AAAAGTCATTTTGGCAGAGAAATACCTGGATCTCGCGGA
rJMSF021C14+ AAAAGTAGGATGGAGGATTT-AAAAGTCATTTTGGCAGAGAAATACCTGGATCTCGCGGA
rJMSF024N24+ AAAAGTAGGATGGAGGATTT-AAAAGTCATTTTGGCAGAGAAATACCTGGATCTCGCGGA
rJMSF020C14+ AAAAGTAGGATGGAGGATTT-AAAAGTCATTTTGGCAGAGAAATACCTGGATCTCGCGGA
rJMFF028C22+ AAAAGTAGGATGGAGGATTTAAAAAGTCATTTTGGCAGAGAAATACCTGGATCTCGCGGA
rJMFF014C24+ AAAAGTAGGATGGAGGATTT-AAAAGTCATTTTGGCAGAGAAATACCTGGATCTCGCGGA
____________________________________________________________
consensus AAAAGTAGGATGGAGGATTT-AAAAGTCATTTTGGCAGAGAAATACCTGGATCTCGCGGA
. : . : . : . : . : . :
rJMSF020D14+ ATCAATATGGCCCTATTACTGCAGAGCAATCCGGACTTTGAAGAGGGCCAACCTTATCTA
rJMSF021C14+ ATCAATATGGCCCTATTACTGCAGAGCAATCCGGACTTTGAAGAGGGCCAACCTTATCTA
rJMSF024N24+ ATCAATATGGCCCTATTACTGCAGAGCAATCCGGACTTTGAAGAGGGCCAACCTTATCTA
rJMSF020C14+ ATCAATATGGCCCTATTACTGCAGAGCAATCCGGACTTTGAAGAGGGCCAACCTTATCTA
rJMFF028C22+ ATCAATATGGCCCTATTACTGCAGAGCAATCCGGACTTTGAAGAGGGCCAACCTTATCTA
rJMFF014C24+ ATCAATATGGCCCTATTACTGCAGAGCAATCCGGACTTTGAAGAGGGCCAACCTTATCTA
____________________________________________________________
consensus ATCAATATGGCCCTATTACTGCAGAGCAATCCGGACTTTGAAGAGGGCCAACCTTATCTA
. : . : . : . : . : . :
rJMSF020D14+ GACTCGACAAATTTTACGGTAAAGAGCTATGGATGCTGAGGGACATCTTTTTTGCTTATT
rJMSF021C14+ GACTCGACAAATTTTACGGTAAAGAGCTATGGATGCTGAGGGACATCTTTTTTGCTTATT
rJMSF024N24+ GACTCGACAAATTTTACGGTAAAGAGCTATGGATGCTGAGGGACATCTTTTTTGCTTATT
rJMSF020C14+ GACTCGACAAATTTTACGGTAAAGAGCTATGGATGCTGAGGGACATCTTTTTTGCTTATT
rJMFF028C22+ GACTCGACAAATTTTACGGTAAAGAGCTATGGATGCTGAGGGACATCTTTTTTGCTTATT
rJMFF014C24+ GACTCGACAAATTTTACGGTAAAGAGCTATGGATGCTGAGGGACATCTTTTTTGCTTATT
____________________________________________________________
consensus GACTCGACAAATTTTACGGTAAAGAGCTATGGATGCTGAGGGACATCTTTTTTGCTTATT
. : . : . : . : . : . :
rJMSF020D14+ CACTTTTTCTTGGAGGGGAAGAGTTGAAACCCCATTTTGGGCTGGGGTAGTCATTCCCTA
rJMSF021C14+ CACTTTTTCTTGGAGGGGAAGAGTTGAAACCCCATTTTGGGCTGGGGTAGTCATTCCCTA
rJMSF024N24+ CACTTTTTCTTGGAGGGGAAGAGTTGAAACCCCATTTTGGGCTGGGGTAGTCATTCCCTA
rJMSF020C14+ CACTTTTTCTTGGAGGGGAAGAGTTGAAACCCCATTTTGGGCTGGGGTAGTCATTCCCTA
rJMFF028C22+ CACTTTTTCTTGGAGGGGAAGAGTTGAAACCCCATTTTGGGCTGGGGTAGTCATTCCCTA
rJMFF014C24+ CACTTTTTCTTGGAGGGGAAGAGTTGAAACCCCATTTTGGGCTGGGGTAGTCATTCCCTA
____________________________________________________________
consensus CACTTTTTCTTGGAGGGGAAGAGTTGAAACCCCATTTTGGGCTGGGGTAGTCATTCCCTA
. : . : . : . : . : . :
rJMSF020D14+ AAGAGAACAGAATACTATTGCAACACAGCCAGACTTGCAGGTTTTTTTTGTAACTTTCTG
rJMSF021C14+ AAGAGAACAGAATACTATTGCAACACAGCCAGACTTGCAGGTTTTTTTTGTAACTTTCTG
rJMSF024N24+ AAGAGAACAGAATACTATTGCAACACAGCCAGACTTGCAGGTTTTTTTTGTAACTTTCTG
rJMSF020C14+ AAGAGAACAGAATACTATTGCAACACAGCCAGACTTGCAGGTTTTTTTTGTAACTTTCTG
rJMFF028C22+ AAGAGAACAGAATACTATTGCAACACAGCCAGACTTGCAGGTTTTTTTTGTAACTTTCTG
rJMFF014C24+ AAGAGAACAGAATACTATTGCAACACAGCCAGACTTGCAGGTTTTTTTTGTAACTTTCTG
____________________________________________________________
consensus AAGAGAACAGAATACTATTGCAACACAGCCAGACTTGCAGGTTTTTTTTGTAACTTTCTG
. : . : . : . : . : . :
rJMSF020D14+ AATTGCAGTTCAAGTTAGTTTGCATTGGATGTTCGTTCATTCATCACATCCTGATTAAAC
rJMSF021C14+ AATTGCAGTTCAAGTTAGTNTGCATTGGATGTTCGTTCATTCATCACATCCTGATTAAAC
rJMSF024N24+ AATTGCAGTTCAAGTTAGTTTGCATTGGATGTTCGTTCATTCATCACATCCTGATTAAAC
rJMSF020C14+ AATTGCAGTTCAAGTTAGTTTGCATTGGATGTTCGTTCATTCATCACATCCTGATTAAAC
rJMFF028C22+ AATTGCAGTTCAAGTTAGTTTGCATTGGATGTTCATTCATTCATCACATCCTGATTAAAC
rJMFF014C24+ AATTGCAGTTCAAGTTAGTTTGCATTGGATGTTCATTCATTCATCACATCCTGATTAAAC
____________________________________________________________
consensus AATTGCAGTTCAAGTTAGTTTGCATTGGATGTTCGTTCATTCATCACATCCTGATTAAAC
. : . : . : . : . : . :
rJMSF020D14+ TTAGGCCTCGTAGGGATGCTTCTCA-CTGTGTTTAACCAGTCAAAATCTCTAACACTCCA
rJMSF021C14+ TTAGGCCTCGTAGGGATGCTTCTCA-CTGTGTTTAACCAGTCAAAATCTCTAACNCTCCA
rJMSF024N24+ TTAGGCCTCGTAGGGATGCTTCTCACCTGTGTTTAACCAGTCAAAATCTC
rJMSF020C14+ TTAGGCCTCGTAGGGATGCTTCTCA-CTGTGTTTAACCAGTCAAAATCTCTAACACTCCA
rJMFF028C22+ TTAGGCCTCGTAGGGATGCTTCTCA-CTGTGTTTAACCAGTCAAAATCTCTAACACTCCA
rJMFF014C24+ TTAGGCCTCGTAGGGATGCTTCTCA-CTGTGTTTAACCAGTCAAAATCTCTAACACTCCA
____________________________________________________________
consensus TTAGGCCTCGTAGGGATGCTTCTCA-CTGTGTTTAACCAGTCAAAATCTCTAACACTCCA
. : . : . : . : . : . :
rJMSF020D14+ TCTCTTCTTGTCACATCGGTTTCTTATTTTTGGAAGATTTTTGTTGTTTAGTTGTGTGTG
rJMSF021C14+ TCTCTTCTTGTCACATCGGTTTCTTATTTTTNGAAGATTTTTGTTGTTTAGTTGTGTGTG
rJMSF020C14+ TCTCTTCTTGTCACATCGGTTTCTTATTTTTGGAAGATTTTTGTTGTTTAGTTGTGTGTG
rJMFF028C22+ TCTCTTCTTGTCACATCGGTTTCTTATTTTTGGAAGATTTTTGTTGTTTAGTTGTGTGTG
rJMFF014C24+ TCTCTTCTTGTCACATCGGTTTCTTATTTTTGGAAGATTTTTGTTGTTTAGTTGTGTGTG
____________________________________________________________
consensus TCTCTTCTTGTCACATCGGTTTCTTATTTTTGGAAGATTTTTGTTGTTTAGTTGTGTGTG
. : . : . : . : . : . :
rJMSF020D14+ AATTGTGGAATATGTTACTA
rJMSF021C14+ AA
rJMSF020C14+ AATTGTGGAATATGTTACTA
rJMFF028C22+ AATTGTGGAATATGTTACTACTGCCCTTTCATTTTCCATCAGATTTGGCCCTCTATTTGA
rJMFF014C24+ AATTGTGGAATATGTTACTACTGCCCTTTCATTTTCCATCAGATTTGGCCCTCTATTTGA
____________________________________________________________
consensus AATTGTGGAATATGTTACTACTGCCCTTTCATTTTCCATCAGATTTGGCCCTCTATTTGA
. : . : . : . : . : . :
rJMFF028C22+ TTCCATCCTCTGATGTCTTTCTGGTTTGGTAAAGTGCATCTGTTCAGGATTGGTTTTCGT
rJMFF014C24+ TTCCATCCTCTGATGTCTTTCTGGTTTGGTAAAGTGCATCTGTTCAGGATTGGTTTTCGT
____________________________________________________________
consensus TTCCATCCTCTGATGTCTTTCTGGTTTGGTAAAGTGCATCTGTTCAGGATTGGTTTTCGT
. : . : . : . : . : . :
rJMFF028C22+ AGATTTTGTTTTGCGTTTTTGTTTTTTCTGAATTCTGCACTAGCATTTGCATCCCGATGA
rJMFF014C24+ AGATTTTGTTTTGCGTTTTTGTTTTTTCTGAATTCTGCACTAGCATTTGCATCCCGATGA
____________________________________________________________
consensus AGATTTTGTTTTGCGTTTTTGTTTTTTCTGAATTCTGCACTAGCATTTGCATCCCGATGA
. : . : . : . : . : . :
rJMFF028C22+ GATTAATTCAATCTAGTCTAGTCTCGGTTGTGCCCTATTTGAGGACCGCTCTCTCAAAGA
rJMFF014C24+ GATTAATTCAATCTAGTCTAGTCTCGGTTGTGCCCTATTTGAGGACCGCTCTCTCAAAGA
____________________________________________________________
consensus GATTAATTCAATCTAGTCTAGTCTCGGTTGTGCCCTATTTGAGGACCGCTCTCTCAAAGA