Contig 011011:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013P21Sequence574022713ref|XP_009588990.1|9e-76PREDICTED: 65-kDa microtubule-associated protein 1-like [Nicotiana tomentosifor707011011 (4)emb|CDP13779.1|9e-70unnamed protein product [Coffea canephora]
JMFN014K05Sequence521011011 (4)gb|EYU27387.1|4e-40hypothetical protein MIMGU_mgv1a003477mg [Erythranthe guttata]
JMFN031D10Sequence575011011 (4)gb|EYU27387.1|3e-36hypothetical protein MIMGU_mgv1a003477mg [Erythranthe guttata]
JMFN037H09Sequence478011011 (4)gb|EYU27387.1|9e-37hypothetical protein MIMGU_mgv1a003477mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFN031D10+                                                                      T
                      ____________________________________________________________
consensus                                                                        T
 
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JMFN031D10+           TTAAAATCAGAATGGNAAACGTGTTAGCATAACGGGCTAATCTGTAAGTTCTCAGACCAC
rJMFF013P21-                           AACGTGTTAGCATAACGGGCTAATCTGTAAGTTCTCAGACCAC
                      ____________________________________________________________
consensus             TTAAAATCAGAATGGNAAACGTGTTAGCATAACGGGCTAATCTGTAAGTTCTCAGACCAC
 
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JMFN031D10+           AAGATCTATGGGTAGTATGTAGTTTACCCCTCACTTATTTAAAGACTCCATAGCAATTAT
JMFN037H09+                                               ATTTAAAGACTCCATAGCAATTAT
JMFN014K05+                     GGTAGTATGTAGTTTACCCCTCACTTATTTAAAGACTCCATAGCAATTAT
rJMFF013P21-          AAGATCTATGGGTAGTATGTAGTTTACCCCTCACTTATTTAAAGACTCCATAGCAATTAT
                      ____________________________________________________________
consensus             AAGATCTATGGGTAGTATGTAGTTTACCCCTCACTTATTTAAAGACTCCATAGCAATTAT
 
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JMFN031D10+           CATTACACCACAAACAGCTACACAAGTCTCTAATCTCAAATTACTGTCTACATACTTCCA
JMFN037H09+           CATTACACCACAAACAGCTACACAAGTCTCTAATCTCAAATTACTGTCTACATACTTCCA
JMFN014K05+           CATTACACCACAAACAGCTACACAAGTCTCTAATCTCAAATTACTGTCTACATACTTCCA
rJMFF013P21-          CATTACACCACAAACAGCTACACAAGTCTCTAATCTCAAATTACTGTCTACATACTTCCA
                      ____________________________________________________________
consensus             CATTACACCACAAACAGCTACACAAGTCTCTAATCTCAAATTACTGTCTACATACTTCCA
 
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JMFN031D10+           AGTCCCTTGTTCAAATACGTATTCTCTACTACAGTAACTAAGCTACTGATGATATTGCAA
JMFN037H09+           AGTCCCTTGTTCAAATACGTATTCTCTACTACAGTAACTAAGCTACTGATGATATTGCAA
JMFN014K05+           AGTCCCTTGTTCAAATACGTATTCTCTACTACAGTAACTAAGCTACTGATGATATTGCAA
rJMFF013P21-          AGTCCCTTGTTCAAATACGTATTCTCTACTACAGTAACTAAGCTACTGATGATATTGCAA
                      ____________________________________________________________
consensus             AGTCCCTTGTTCAAATACGTATTCTCTACTACAGTAACTAAGCTACTGATGATATTGCAA
 
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JMFN031D10+           AGGTATAAACATATGCAGATAGATCTCTCTTGCTCGTCGAAGACTATGGAGTAGTTGGAA
JMFN037H09+           AGGTATAAACATATGCAGATAGATCTCTCTTGCTCGTCGAAGACTATGGAGTAGTTGGAA
JMFN014K05+           AGGTATAAACATATGCAGATAGATCTCTCTTGCTCGTCGAAGACTATGGAGTAGTTGGAA
rJMFF013P21-          AGGTATAAACATATGCAGATAGATCTCTCTTGCTCGTCGAAGACTATGGAGTAGTTGGAA
                      ____________________________________________________________
consensus             AGGTATAAACATATGCAGATAGATCTCTCTTGCTCGTCGAAGACTATGGAGTAGTTGGAA
 
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JMFN031D10+           GAGGCTCGTTGCTGGAAATGTGGGAGGTTGAGTCCTCTTTTGATATGGCAACATAGTTCA
JMFN037H09+           GAGGCTCGTTGCTGGAAATGTGGGAGGTTGAGTCCTCTTTTGATATGGCAACATAGTTCA
JMFN014K05+           GAGGCTCGTTGCTGGAAATGTGGGAGGTTGAGTCCTCTTTTGATATGGCAACATAGTTCA
rJMFF013P21-          GAGGCTCGTTGCTGGAAATGTGGGAGGTTGAGTCCTCTTTTGATATGGCAACATAGTTCA
                      ____________________________________________________________
consensus             GAGGCTCGTTGCTGGAAATGTGGGAGGTTGAGTCCTCTTTTGATATGGCAACATAGTTCA
 
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JMFN031D10+           AAGGAACTGCGGCCCTTGCACTCTCTCTCCTCCCATCTTTAGATGTTGACCTGGAACCAT
JMFN037H09+           AAGGAACTGCGGCCCTTGCACTCTCTCTCCTCCCATCTTTAGATGTTGACCTGGAACCAT
JMFN014K05+           AAGGAACTGCGGCCCTTGCACTCTCTCTCCTCCCATCTTTAGATGTTGACCTGGAACCAT
rJMFF013P21-          AAGGAACTGCGGCCCTTGCACTCTCTCTCCTCCCATCTTTAGATGTTGACCTGGAACCAT
                      ____________________________________________________________
consensus             AAGGAACTGCGGCCCTTGCACTCTCTCTCCTCCCATCTTTAGATGTTGACCTGGAACCAT
 
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JMFN031D10+           TTTGATGGGAATTAAGAGACAACCTCCTGTTGGCGGTTCCATTGCCACTCCCGTTTGTTC
JMFN037H09+           TTTGATGGGAATTAAGAGACAACCTCCTGTTGGCGGTTCCATTGCCACTCCCGTTTGTTC
JMFN014K05+           TTTGATGGGAATTAAGAGACAACCTCCTGTTGGCGGTTCCATTGCCACTCCCGTTTGTTC
rJMFF013P21-          TTTGATGGGAATTAAGAGACAACCTCCTGTTGGCGGTTCCATTGCCACTCCCGTTTGTTC
                      ____________________________________________________________
consensus             TTTGATGGGAATTAAGAGACAACCTCCTGTTGGCGGTTCCATTGCCACTCCCGTTTGTTC
 
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JMFN031D10+           GGGGACCCACCACCTTTTTTGTGCCTAGTTGTCGAGCAGGGCTTGGTGTAGAACCAAACA
JMFN037H09+           GGGGACCCACCACCTTTTTTGTGCCTAGTTGTCGAGCAGGGCTTGGTGTAGAACCAAACA
JMFN014K05+           GGGGACCCACCACCTTTTTTGTGCCTAGTTGTCGAGCAGGGCTTGGTGTAGAACCAAACA
rJMFF013P21-          GGGGACCCACCACCTTTTTTGTGCCTAGTTGTCGAGCAGGGCTTGGTGTAGAACCAAACA
                      ____________________________________________________________
consensus             GGGGACCCACCACCTTTTTTGTGCCTAGTTGTCGAGCAGGGCTTGGTGTAGAACCAAACA
 
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JMFN031D10+           TTCCATCTTGCTCTTTGTTTATCTGTTCATGAAA                          
JMFN037H09+           TTCCATCTTGCTCTTTGTTTATCTGTTCATGAAA                          
JMFN014K05+           TTCCATCTTGCTCTTTGTTTATCTGTTCATGAAACTTCTTCTGGTCCCTCA         
rJMFF013P21-          TTCCATCTTGCTCTTTGTTTATCTGTTCATGAAACTTCTTCTGGTCCCTCAACCTTCTTT
                      ____________________________________________________________
consensus             TTCCATCTTGCTCTTTGTTTATCTGTTCATGAAACTTCTTCTGGTCCCTCAACCTTCTTT
 
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rJMFF013P21-          TCTCTTCTTCTCTGTCGTGCCTAAGCATCATGTACTCATCTAGCATAGCAAGCAGAGGAA
                      ____________________________________________________________
consensus             TCTCTTCTTCTCTGTCGTGCCTAAGCATCATGTACTCATCTAGCATAGCAAGCAGAGGAA
 
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rJMFF013P21-          CACCATCATAGGTGAACGTTGAGTCACGATCTTGTTCCCATGCCCGAGTTTTATTGATCA
                      ____________________________________________________________
consensus             CACCATCATAGGTGAACGTTGAGTCACGATCTTGTTCCCATGCCCGAGTTTTATTGATCA