Contig 011007:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF011N11-                                                        GTGTATTGTATCACT
                      ____________________________________________________________
consensus                                                          GTGTATTGTATCACT
 
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JMFF011N11-           TCTTCCCCAAGTATAGAACTTCAGCCGATCACTCCTCTTGTGCATCACCGACGGCGTGAA
                      ____________________________________________________________
consensus             TCTTCCCCAAGTATAGAACTTCAGCCGATCACTCCTCTTGTGCATCACCGACGGCGTGAA
 
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JMFF011N11-           GCGAAACCGAAACCTTGGAGATCTTCTCCTTCGACCGAGCCCTTCCTCTGGTTCATCTCC
                      ____________________________________________________________
consensus             GCGAAACCGAAACCTTGGAGATCTTCTCCTTCGACCGAGCCCTTCCTCTGGTTCATCTCC
 
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JMFF011N11-           ACCCTTCTTTCCCTTTTTCCCGTCGAGACAGAGCTCCGGCAGAGCTGAGAAGAAGCAACC
                      ____________________________________________________________
consensus             ACCCTTCTTTCCCTTTTTCCCGTCGAGACAGAGCTCCGGCAGAGCTGAGAAGAAGCAACC
 
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JMFF011N11-           AACACCCAAGCAACCCCCCCTCCCCGTTTCTTCTTCGCAACGGACCAGAAGACAGCGCGC
rJMFF011N11+                                           TTCGCAACGGACCAGAAGACAGCGCGC
                      ____________________________________________________________
consensus             AACACCCAAGCAACCCCCCCTCCCCGTTTCTTCTTCGCAACGGACCAGAAGACAGCGCGC
 
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JMFF011N11-           CACCTTCTTTCCTCTCCTTCTCCTTCGGNTTCCAGTGTGAGAGCATGCGGCAGAGACGTC
rJMFF011N11+          CACCTTCTTTCCTCTCCTTCTCCTTCGGTTTCCAGTGTGAGAGCATGCGGCAGAGACGTC
                      ____________________________________________________________
consensus             CACCTTCTTTCCTCTCCTTCTCCTTCGGTTTCCAGTGTGAGAGCATGCGGCAGAGACGTC
 
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JMFF011N11-           GGCGGTGCTATGTCTCCGGCGACGGGTTCGGTACGGTGCGGCGAAGTTCAACCCTCCTGC
rJMFF011N11+          GGCGGTGCTATGTCTCCGGCGACGGGTTCGGTACGGTGCGGCGAAGTTCAACCCTCCTGC
                      ____________________________________________________________
consensus             GGCGGTGCTATGTCTCCGGCGACGGGTTCGGTACGGTGCGGCGAAGTTCAACCCTCCTGC
 
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JMFF011N11-           GGTGGTTTTGGGTGTTCCTTGAAGACGTAGGCAGTGAAGTAGAGCGGCTCCGTCGATCGA
rJMFF011N11+          GGTGGTTTTGGGTGTTCCTTGAAGACGTAGGCAGTGAAGTAGAGCGGCTCCGTCGATCGA
                      ____________________________________________________________
consensus             GGTGGTTTTGGGTGTTCCTTGAAGACGTAGGCAGTGAAGTAGAGCGGCTCCGTCGATCGA
 
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JMFF011N11-           CCAAAAGGTGGAAGCTTTTTCTGATCGTCACCTTTTCCCGGCAGAAGGCTCTTTCCGGCG
rJMFF011N11+          CCAAAAGGTGGAAGCTTTTTCTGATCGTCACCTTTTCCCGGCAGAAGGCTCTTTCCGGCG
                      ____________________________________________________________
consensus             CCAAAAGGTGGAAGCTTTTTCTGATCGTCACCTTTTCCCGGCAGAAGGCTCTTTCCGGCG
 
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JMFF011N11-           AGGCAGCCTTCGATTTCCTTCTCTTCCGGCGTCGGCGGCGGTGCTTGGAGGAGGTTCTCC
rJMFF011N11+          AGGCAGCCTTCGATTTCCTTCTCTTCCGGCGTCGGCGGCGGTGCTTGGAGGAGGTTCTCC
                      ____________________________________________________________
consensus             AGGCAGCCTTCGATTTCCTTCTCTTCCGGCGTCGGCGGCGGTGCTTGGAGGAGGTTCTCC
 
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JMFF011N11-           GGCTTGGTGGCA                                                
rJMFF011N11+          GGCTTGGTGGCAGTTTGGCGCCGGCGGGTGGAGGGTGTCACCGTGTTCCACCCGCGGGAA
                      ____________________________________________________________
consensus             GGCTTGGTGGCAGTTTGGCGCCGGCGGGTGGAGGGTGTCACCGTGTTCCACCCGCGGGAA
 
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rJMFF011N11+          CGTTGCATGAAGAAGATCGAAGAAGAAGAAGTTGGCTGTGGTTCCCGTTTGGCTTATGAG
                      ____________________________________________________________
consensus             CGTTGCATGAAGAAGATCGAAGAAGAAGAAGTTGGCTGTGGTTCCCGTTTGGCTTATGAG
 
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rJMFF011N11+          TTGAGCCTAGCCTATGTTGGCGTTGTTTTTGGTTGGATAAGCGAATGAGGCACATATGAG
                      ____________________________________________________________
consensus             TTGAGCCTAGCCTATGTTGGCGTTGTTTTTGGTTGGATAAGCGAATGAGGCACATATGAG
 
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rJMFF011N11+          TAGCTCCGCAGCGCGCTAGAGGACGCGAGACTTAGATATTTTGTTTCCTTATCGGCCTGT
                      ____________________________________________________________
consensus             TAGCTCCGCAGCGCGCTAGAGGACGCGAGACTTAGATATTTTGTTTCCTTATCGGCCTGT
 
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rJMFF011N11+          GTGCCATGATGATGTAATGACATTGTCTTGAGGATTTTTAGATAGCATAGCCTGTGCATC
                      ____________________________________________________________
consensus             GTGCCATGATGATGTAATGACATTGTCTTGAGGATTTTTAGATAGCATAGCCTGTGCATC
 
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rJMFF011N11+          GGAGTTCTCCAGCTCAGATGTGGCATAACACCCCGAACACTTATGTTTAGTAATGCTCTG
                      ____________________________________________________________
consensus             GGAGTTCTCCAGCTCAGATGTGGCATAACACCCCGAACACTTATGTTTAGTAATGCTCTG