Contig 011004:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001I12Sequence545009372 (11)dbj|BAO02551.1|4e-31(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]757011004 (12)dbj|BAO02547.1|1e-122(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]
JMFF002N17Sequence505009372 (11)dbj|BAO02551.1|3e-28(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]744011004 (12)gb|KCW44805.1|3e-98hypothetical protein EUGRSUZ_L01630 [Eucalyptus grandis]
JMFF003C11Sequence511009372 (11)dbj|BAO02551.1|3e-28(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]714011004 (12)dbj|BAO02547.1|1e-115(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]
JMFF009E07Sequence525009372 (11)dbj|BAO02551.1|4e-31(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]566011004 (12)gb|KCW44805.1|4e-68hypothetical protein EUGRSUZ_L01630 [Eucalyptus grandis]
JMFF011K04Sequence482009372 (11)dbj|BAO02551.1|3e-28(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]818011004 (12)dbj|BAO02547.1|8e-118(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]
JMFF014P24Sequence470009372 (11)dbj|BAO02551.1|1e-27(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]804011004 (12)dbj|BAO02547.1|7e-121(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]
JMFF015D04Sequence313009372 (11)ref|XP_009600562.1|2e-07PREDICTED: xyloglucan 6-xylosyltransferase 2 [Nicotiana tomentosiformis]696011004 (12)dbj|BAO02547.1|1e-107(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]
JMFF016P01Sequence248011004 (12)gb|KCW44805.1|5e-38hypothetical protein EUGRSUZ_L01630 [Eucalyptus grandis]
JMFF036B22Sequence465009372 (11)ref|XP_006356974.1|4e-25PREDICTED: putative glycosyltransferase 2-like [Solanum tuberosum]763011004 (12)dbj|BAO02547.1|1e-122(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]
JMFF039B06Sequence508009372 (11)dbj|BAO02551.1|4e-28(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]715011004 (12)dbj|BAO02547.1|3e-112(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]
JMFF051G08Sequence579009372 (11)dbj|BAO02551.1|4e-37(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]517011004 (12)gb|KCW44805.1|1e-59hypothetical protein EUGRSUZ_L01630 [Eucalyptus grandis]
JMSF027I08Sequence627009372 (11)dbj|BAO02551.1|3e-48(1-6)-alpha-D-xylosyltransferase ortholog, partial [Nicotiana alata]760011004 (12)gb|KCW44805.1|3e-100hypothetical protein EUGRSUZ_L01630 [Eucalyptus grandis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+                     CCATGAGGTCTATGAGAAGAAGAACTGGATTGGGTTAAACACCGGTAGC
rJMFF003C11+                                                             ACCGGTAGC
rJMFF039B06+                                                             ACCGGTAGC
rJMFF036B22+             GTTGGGGCCCATGAGGTCTATGAGAAGAAGAACTGGATTGGGTTAAACACCGGTAGC
rJMFF014P24+                                                    GGGTTAAACACCGGTAGC
rJMFF011K04+                                                    GGGTTAAACACCGGTAGC
                      ____________________________________________________________
consensus                GTTGGGGCCCATGAGGTCTATGAGAAGAAGAACTGGATTGGGTTAAACACCGGTAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+          TTTCTGCTAAGAAATACCCAATGGTCATTGGATATTCTTGATGCCCTTGCTCCAATGGGG
rJMFF015D04+                   AGAAATACCCAATGGTCATNGGATATTCTTGATGCCCTTGCTCCAATGGGN
rJMFF003C11+          TTTCTGCTAAGAAATACCCAATGGTCATTGGATATTCTTGATGCCCTTGCTCCAATGGGG
rJMFF039B06+          TTTCTGCTAAGAAATACCCAATGGTCATGGGATATTCTTGATGCCCTTGCTCCAATGGGG
rJMFF036B22+          TTTCTGCTAAGAAATACCCAATGGTCATTGGATATTCTTGATGCCCTTGCTCCAATGGGG
rJMSF027I08+                 TAAGAAATACCCAATGGTCATTGGATATTCTTGATGCCCTTGCTCCATGGGGC
rJMFF014P24+          TTTCTGCTAAGAAATACCCAATGGTCATTGGATATTCTTGATGCCCTTGCTCCAATGGGG
rJMFF002N17+                                              CTTGATGCCCTTGCTCCAATGGGG
rJMFF011K04+          TTTCTGCTAAGAAATACCCAATGGTCATTGGATATTCTTGATGCCCTTGCTCCAATGGGG
                      ____________________________________________________________
consensus             TTTCTGCTAAGAAATACCCAATGGTCATTGGATATTCTTGATGCCCTTGCTCCAATGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+          CCAAAA-GGGAAGGTCAGGGACGATGCCGGTGCATTACTCACCAGTGAGCTCAAGGGCAG
rJMFF015D04+          CCAAAA-GNGAAGGTCAGGGACGATGCCGGTGCATTACTCACCAGTGAGCTCAAGGGCAG
rJMFF003C11+          CCAAAA-GGGAAGGTCAGGGACGATGCCGGTGCATTACTCACCAGTGAGCTCAAGGGCAG
rJMFF039B06+          CCAAAA-GGGAAGGTCAGGGNCGATGCCGGTGCATTACTCACCAGTGAGCTCAAGGGCAG
rJMFF036B22+          CCAAAA-GGGAAGGTCAGGGACGATGCCGGTGCATTACTCACCAGTGAGCTCAAGGGCAG
rJMSF027I08+          CAAAA--GGGAAGGTCAGGGACGATGCCGGTGCATTACTCACCAGTGAGCTCAAGGGCAG
rJMFF014P24+          CCAAAA-GGGAAGGTCAGGGACGATGCCGGTGCATTACTCACCAGTGAGCTCAAGGGCAG
rJMFF002N17+          CCAAAAGGGGAAGGTCAGGGACGATGCCGGTGCATTACTCACCAGTGAGCTCAAGGGCAG
rJMFF011K04+          CCAAAA-GGGAAGGTCAGGGACGATGCCGGTGCATTACTCACCAGTGAGCTCAAGGGCAG
                      ____________________________________________________________
consensus             CCAAAA-GGGAAGGTCAGGGACGATGCCGGTGCATTACTCACCAGTGAGCTCAAGGGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+          GCCTGTTTTCGAAGCAGATGATCAATCTGCTATGGTATATCTCTTGGCAACCCAGCAAGA
rJMFF015D04+          GCCTGTTTTCGAAGCAGATGATCAATCTGCTATGGTATATCTCTTGGCAACCCAGCAAGA
rJMFF003C11+          GCCTGTTTTCGAAGCAGATGATCAATCTGCTATGGTATATCTCTTGGCAACCCAGCAAGA
rJMFF039B06+          GCCTGTTTTCGAAGCAGATGATCAATCTGCTATGGTATATCTCTTGGCAACCCAGCAAGA
rJMFF036B22+          GCCTGTTTTCGAAGCAGATGATCAATCTGCTATGGTATATCTCTTGGCAACCCAGCAAGA
rJMSF027I08+          GCCTGTTTTCGAAGCAGATGATCAATCTGCTATGGTATATCTCTTGGCAACCCAGCAAGA
rJMFF014P24+          GCCTGTTTTCGAAGCAGATGATCAATCTGCTATGGTATATCTCTTGGCAACCCAGCAAGA
rJMFF002N17+          GCCTGTTTTCGAAGCAGATGATCAATCTGCTATGGTATATCTCTTGGCAACCCAGCAAGA
rJMFF011K04+          GCCTGTTTTCGAAGCAGATGATCAATCTGCTATGGTATATCTCTTGGCAACCCAGCAAGA
                      ____________________________________________________________
consensus             GCCTGTTTTCGAAGCAGATGATCAATCTGCTATGGTATATCTCTTGGCAACCCAGCAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+          GAAGTGGGCTGATAAGGTGCATCTGGAGAACCTTTACTTCTTGCACGGTTACTGGGGAAT
rJMFF015D04+          GAAGTGGGNTGATAAGGTGCATCTGGAGAACCTTTACTTCTTGCACGGTTACTGGGGAAT
rJMFF016P01+                                                              TGGGGAAT
rJMFF003C11+          GAAGTGGGCTGATAAGGTGCATCTGGAGAACCTTTACTTCTTGCACGGTTACTGGGGAAT
rJMFF039B06+          GAAGTGGGCTGATAAGGTGCATCTGGAGAACCTTTACTTCTTGCACGGTTACTGGGGAAT
rJMFF036B22+          GAAGTGGGCTGATAAGGTGCATCTGGAGAACCTTTACTTCTTGCACGGTTACTGGGGAAT
rJMSF027I08+          GAAGTGGGCTGATAAGGTGCATCTGGAGAACCTTTACTTCTTGCACGGTTACTGGGGAAT
rJMFF014P24+          GAAGTGGGCTGATAAGGTGCATCTGGAGAACCTTTACTTCTTGCACGGTTACTGGGGAAT
rJMFF002N17+          GAAGTGGGCTGATAAGGTGCATCTGGAGAACCTTTACTTCTTGCACGGTTACTGGGGAAT
rJMFF009E07+                                            TACTTCTTGCACGGTTACTGGGGAAT
rJMFF011K04+          GAAGTGGGCTGATAAGGTGCATCTGGAGAACCTTTACTTCTTGCACGGTTACTGGGGAAT
                      ____________________________________________________________
consensus             GAAGTGGGCTGATAAGGTGCATCTGGAGAACCTTTACTTCTTGCACGGTTACTGGGGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+          TCTGGTGGATAGGTACGAAGAAATGATCGACAATTTCCACCCCGGATTCGGGGATCATAG
rJMFF015D04+          TCTGGTGGATAGGTACGAAGAAATGATCGACAATTTCCACCCCGGATTCGGGGATCATAG
rJMFF016P01+          TCTGGTGGATAGNTNNGAAGAAATGATCGACANTTTCCACCCNGGATTCGGGGATCATAG
rJMFF003C11+          TCTGGTGGATAGGTACGAAGAAATGATCGACAATTTCCACCCCGGATTCGGGGATCATAG
rJMFF039B06+          TNTGGTGGATAGGTACGAAGAAATGATCGACAATTTCCACCCCGGATTCGGGGATCATAG
rJMFF036B22+          TCTGGTGGATAGGTACGAAGAAATGATCGACAATTTCCACCCCGGATTCGGGGATCATAG
rJMSF027I08+          TCTGGTGGATAGGTACGAAGAAATGATCGACAATTTCCACCCCGGATTCGGGGATCATAG
rJMFF051G08+                 GATAGGTACGAAGAAATGATCGACAATTTCCACCCCGGATTCGGGGATCATAG
rJMFF014P24+          TCTGGTGGATAGGTACGAAGAAATGATCGACAATTTCCACCCCGGATTCGGGGATCATAG
rJMFF002N17+          TCTGGTGGATAGGTACGAAGAAATGATCGACAATTTCCACCCCGGATTCGGGGATCATAG
rJMFF009E07+          TCTGGTGGATAGGTACGAAGAAATGATCGACAATTTCCACCCCGGATTCGGGGATCATAG
rJMFF011K04+          TCTGGTGGATAGGTACGAAGAAATGATCGACAATTTCCACCCCGGATTCGGGGATCATAG
                      ____________________________________________________________
consensus             TCTGGTGGATAGGTACGAAGAAATGATCGACAATTTCCACCCCGGATTCGGGGATCATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+          GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCCTGCTCCAAGATTGGGGATTACAA
rJMFF015D04+          GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCCTGCTCCAAGATTGGGGATTACAA
rJMFF016P01+          GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCNTNCTCCAAGATTGGGGATTNCAA
rJMFF003C11+          GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCCTGCTCCAAGATTGGGGATTACAA
rJMFF039B06+          GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCCTGCTCCAAGATTGGGGATTACAA
rJMFF036B22+          GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCCTGCTCCAAGATTGGGGATTACAA
rJMSF027I08+          GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCCTGCTCCAAGATTGGGGATTACAA
rJMFF051G08+          GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCCTGCTCCAAGATTGGGGATTACAA
rJMFF014P24+          GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCCTGCTCCAAGATTGGGGATTACAA
rJMFF002N17+          GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCCTGCTCCAAGATTGGGGATTACAA
rJMFF009E07+          GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCCTGCTCCAAGATTGGGGATTACAA
rJMFF011K04+          GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCCTGCTCCAAGATTGGGGATTACAA
                      ____________________________________________________________
consensus             GTGGCCATTGGTGACTCACTTTGTGGGTTGCAAGCCCTGCTCCAAGATTGGGGATTACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+          AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCAACTTCGGGGACAACCAGATCCT
rJMFF015D04+          AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCAACTTNGGGGACAACCAGATCCT
rJMFF016P01+          AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCNACTTCGGGGACAACCAGATCCT
rJMFF003C11+          AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCAACTTCGGGGACAACCAGATCCT
rJMFF039B06+          AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCAACTTCGGGGACAACCAGATCCT
rJMFF036B22+          AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCAACTTCGGGGACAACCAGATCCT
rJMSF027I08+          AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCAACTTCGGGGACAACCAGATCCT
rJMFF051G08+          AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCAACTTCGGGGACAACCAGATCCT
rJMFF014P24+          AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCAACTTCGGGGACAACCAGATCCT
rJMFF002N17+          AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCAACTTCGGGGACAACCAGATCCT
rJMFF009E07+          AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCAACTTCGGGGACAACCAGATCCT
rJMFF011K04+          AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCAACTTCGGGGACAACCAGATCCT
                      ____________________________________________________________
consensus             AGTAGCGAGGTGCGTGAAGCAGATGGATCGCGCATTCAACTTCGGGGACAACCAGATCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+          GCAGATGTACGGATTCACTCACACAACTCTCGAAAGCCGGCGAGTTAAGAGAATCAGAAA
rJMFF015D04+          GCAGATGTACGGATTCACTCACACAACTCTCGAAAGCCGGCGAGTTAAGAGAATCAGAAA
rJMFF016P01+          GCANATGTANGGATTCACTCNCNCAACTCTNGAAAGCCGGCGAGTTAAGAGAATCAGAAA
rJMFF003C11+          GCAGATGTACGGATTCACTCACACAACTCTCGAAAGCCGGCGAGTTAAGAGAATCAGAAA
rJMFF039B06+          GCAGATGTACGGATTCACTCACACAACTCTCGAAAGCCGGCGAGTTAAGAGAATCAGAAA
rJMFF036B22+          GCAGATGTACGGATTCACTCACACAACTCTCGAAAGCCGGCGAGTTAAGAGAATCAGAAA
rJMSF027I08+          GCAGATGTACGGATTCACTCACACAACTCTCGAAAGCCGGCGAGTTAAGAGAATCAGAAA
rJMFF051G08+          GCAGATGTACGGATTCACTCACACAACTCTCGAAAGCCGGCGAGTTAAGAGAATCAGAAA
rJMFF014P24+          GCAGATGTACGGATTCACTCACACAACTCTCGAAAGCCGGCGAGTTAAGAGAATCAGAAA
rJMFF002N17+          GCAGATGTACGGATTCACTCACACAACTCTCGAAAGCCGGCGAGTTAAGAGAATCAGAAA
rJMFF009E07+          GCAGATGTACGGATTCACTCACACAACTCTCGAAAGCCGGCGAGTTAAGAGAATCAGAAA
rJMFF011K04+          GCAGATGTACGGATTCACTCACACAACTCTCGAAAGCCGGCGAGTTAAGAGAATCAGAAA
                      ____________________________________________________________
consensus             GCAGATGTACGGATTCACTCACACAACTCTCGAAAGCCGGCGAGTTAAGAGAATCAGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+          TGAGACTTCCACTCCTCTGGAAATCAGAGATGAACTTGGATTGCTTCACCCTTCATTTAG
rJMFF015D04+          TGAGACTTCCACTCCTCTGGAAATCAGAGATGAACTTGGATTGCTTCACCCTTCATTTAG
rJMFF003C11+          TGAGACTTCCACTCCTCTGGAAATCAGAGATGAACTTGGATTGCTTCACCCTTCATTTAG
rJMFF039B06+          TGAGACTTCCACTCCTCTGGAAATCAGAGATGAACTTGGATTGCTTCACCCTTCATTTAG
rJMFF036B22+          TGAGACTTCCACTCCTCTGGAAATCAGAGATGAACTTGGATTGCTTCACCCTTCATTTAG
rJMSF027I08+          TGAGACTTCCACTCCTCTGGAAATCAGAGATGAACTTGGATTGCTTCACCCTTCATTTAG
rJMFF051G08+          TGAGACTTCCACTCCTCTGGAAATCAGAGATGAACTTGGATTGCTTCACCCTTCATTTAG
rJMFF014P24+          TGAGACTTCCACTCCTCTGGAAATCAGAGATGAACTTGGATTGCTTCACCCTTCATTTAG
rJMFF002N17+          TGAGACTTCCACTCCTCTGGAAATCAGAGATGAACTTGGATTGCTTCACCCTTCATTTAG
rJMFF009E07+          TGAGACTTCCACTCCTCTGGAAATCAGAGATGAACTTGGATTGCTTCACCCTTCATTTAG
rJMFF011K04+          TGAGACTTCCACTCCTCTGGAAATCAGAGATGAACTTGGATTGCTTCACCCTTCATTTAG
                      ____________________________________________________________
consensus             TGAGACTTCCACTCCTCTGGAAATCAGAGATGAACTTGGATTGCTTCACCCTTCATTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+          AGCTGTCAAGGTATAGTCTTCTTGACTGCACTTGAAGAGATGATCTTGCTTCCATTTTCT
rJMFF015D04+          AGCTGTCAAGGTATAGTCTTCTTGACTGCACTTGAAGAGATGATCTTGCTTCCATTTTCT
rJMFF003C11+          AGCTGTCAAGGTATAGTCTTCTTGACTGCACTTGAAGAGATGATCTTGCTTCCATTTTCT
rJMFF039B06+          AGCTGTCAAGGTATAGTCTTCTTGACTGCACTTGAAGAGATGATCTTGCTTCCATTTTCT
rJMFF036B22+          AGCTGTCAAGGTATAGTCTTCTTGACTGCACTTGAAGAGATGATCTTGCTTCCATTTTCT
rJMSF027I08+          AGCTGTCAAGGTATAGTCTTCTTGACTGCACTTGAAGAGATGATCTTGCTTCCATTTTCT
rJMFF051G08+          AGCTGTCAAGGTATAGTCTTCTTGACTGCACTTGAAGAGATGATCTTGCTTCCATTTTCT
rJMFF014P24+          AGCTGTCAAGGTATAGTCTTCTTGACTGCACTTGAAGAGATGATCTTGCTTCCATTTTCT
rJMFF002N17+          AGCTGTCAAGGTATAGTCTTCTTGACTGCACTTGAAGAGATGATCTTGCTTCCATTTTCT
rJMFF009E07+          AGCTGTCAAGGTATAGTCTTCTTGACTGCACTTGAAGAGATGATCTTGCTTCCATTTTCT
rJMFF011K04+          AGCTGTCAAGGTATAGTCTTCTTGACTGCACTTGAAGAGATGATCTTGCTTCCATTTTCT
                      ____________________________________________________________
consensus             AGCTGTCAAGGTATAGTCTTCTTGACTGCACTTGAAGAGATGATCTTGCTTCCATTTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+          TCTATTTTTTTGGGGTGTACCATTAAATTATACCTTCTACATTGTGCTGTGTACTACGAT
rJMFF015D04+          TCTATTTTTTTGGGGTGTACCATTAAATTATACCTTCTACATTGTGCTGTGTACTACGAT
rJMFF003C11+          TCTATTTTTTTGGGGTGTACCATTAAATTATACCTTCTACATTGTGCTGTGTACTACGAT
rJMFF039B06+          TCTATTTTTTTGGGGTGTACCATTAAATTATACCTTCTACATTGTGCTGTGTACTACGAT
rJMFF036B22+          TCTATTTTTTTGGGGTGTACCATTAAATTATACCTTCTACATTGTGCTGTGTACTACGAT
rJMSF027I08+          TCTATTTTTTTGGGGTGTACCATTAAATTATACCTTCTACATTGTGCTGTGTACTACGAT
rJMFF051G08+          TCTATTTTTTTGGGGTGTACCATTAAATTATACCTTCTACATTGTGCTGTGTACTACGAT
rJMFF014P24+          TCTATTTTTTTGGGGTGTACCATTAAATTATACCTTCTACATTGTGCTGTGTACTACGAT
rJMFF002N17+          TCTATTTTTTTGGGGTGTACCATTAAATTATACCTTCTACATTGTGCTGTGTACTACGAT
rJMFF009E07+          TCTATTTTTTTGGGGTGTACCATTAAATTATACCTTCTACATTGTGCTGTGTACTACGAT
rJMFF011K04+          TCTATTTTTTTGGGGTGTACCATTAAATTATACCTTCTACATTGTGCTGTGTACTACGAT
                      ____________________________________________________________
consensus             TCTATTTTTTTGGGGTGTACCATTAAATTATACCTTCTACATTGTGCTGTGTACTACGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I12+          TTGTGTTCCTTAGAGCGAGTTTGCTTGTTGCATTCATTCATCACAAT             
rJMFF015D04+          TTGTGTTCCTTAGAGCGAGTTTGCTTGTTGCATTCATTCATCACAA              
rJMFF003C11+          TTGTGTTCCTTAGAGCGAGTTTGCTTGTTGCATTCATTCATCACAA              
rJMFF039B06+          TTGTGTTCCTTAGAGCGAGTTTGCTTGTTGCATTCATTCATCACAAT             
rJMFF036B22+          TTGTGTTCCTTAGAGCGAGTTTGCTTGTTGCATTCATTCATCACAAT             
rJMSF027I08+          TTGTGTTCCTTAGAGCGAGTTTGCTTGTTGCATTCATTCATCACAATTTTTAATGTTTCA
rJMFF051G08+          TTGTGTTCCTTAGAGCGAGTTTGCTTGTTGCATTCATTCATCACAATTTTTAATGTTTCA
rJMFF014P24+          TTGTGTTCCTTAGAGCGAGTTTGCTTGTTGCATTCATTCATCACAATTTTTAATGTTTCA
rJMFF002N17+          TTGTGTTCCTTAGAGCGAGTTTGCTTGTTGCATTCATTCATCACAATTTTTAATGTTTCA
rJMFF009E07+          TTGTGTTCCTTAGAGCGAGTTTGCTTGTTGCATTCATTCATCACAATTTTTAATGTTTCA
rJMFF011K04+          TTGTGTTCCTTAGAGCGAGTTTGCTTGTTGCATTCATTCATCACAATTTTTAATGTTTCA
                      ____________________________________________________________
consensus             TTGTGTTCCTTAGAGCGAGTTTGCTTGTTGCATTCATTCATCACAATTTTTAATGTTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF027I08+          TAGTCTTTGATATGTATCATTTCCATGAAAGGCATAGTTGAAT                 
rJMFF051G08+          TAGTCTTTGAT                                                 
rJMFF014P24+          TAGTCTTTGATATGTATCATTTCCATGAAAGGCATAGTTGAAT                 
rJMFF002N17+          TAGTCTTTGATATGTATCATTTCCATGAAAGGCATAGTTGAAT                 
rJMFF009E07+          TAGTCTTTGATATGTATCATTTCCATGAAAGGCATAGTTGAAT                 
rJMFF011K04+          TAGTCTTTGATATGTATCATTTCCATGAAAGGCATAGTTGAATGAAGTATNGCATCAAGC
                      ____________________________________________________________
consensus             TAGTCTTTGATATGTATCATTTCCATGAAAGGCATAGTTGAATGAAGTATNGCATCAAGC