Contig 010999:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001C16Sequence520010999 (4)ref|XP_009784791.1|1e-53PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [N
JMFF010L12Sequence561011494 (3)679010999 (4)ref|XP_009784791.1|3e-105PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [N
JMFF010M03Sequence550011494 (3)gb|KDO48221.1|9e-09hypothetical protein CISIN_1g0422021mg, partial [Citrus sinensis]775010999 (4)ref|XP_009784791.1|2e-116PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [N
JMFF020P09Sequence702010999 (4)ref|XP_009784791.1|3e-101PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [N

Alignment

This contig is upended


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rJMFF010L12+                                                                 GCTGC
rJMFF010M03+              GAAGTTATGGGAGGCNTAAAAAATGTCTATGCAATTGGCGCTGGAATGGTAGCTGC
                      ____________________________________________________________
consensus                 GAAGTTATGGGAGGCNTAAAAAATGTCTATGCAATTGGCGCTGGAATGGTAGCTGC
 
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rJMFF020P09+              ACTANCGAAAGTGCTACTAGCAAATCTGTGTATTTTGCTCACTGCACATCGGAGAT
rJMFF010L12+          ACTGACTAACGAAAGTGCTACTAGCAAATCTGTGTATTTTGCTCACTGCACATCGGAGAT
rJMFF010M03+          ACTGACTAACGAAAGTGCTACTAGCAAATCTGTGTATTTTGCTCACTGCACATCGGAGAT
                      ____________________________________________________________
consensus             ACTGACTAACGAAAGTGCTACTAGCAAATCTGTGTATTTTGCTCACTGCACATCGGAGAT
 
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rJMFF020P09+          GATATTTATCACGCATTTGTTAACTGAAGAACCCGAGAGGCTTGCAGGGCCGCTGCTCGC
rJMFF010L12+          GATATTTATCACGCATTTGTTAACTGAAGAACCCGAGAGGCTTGCAGGGCCGCTGCTCGC
rJMFF010M03+          GATATTTATCACGCATTTGTTAACTGAAGAACCCGAGAGGCTTGCAGGGCCGCTGCTCGC
                      ____________________________________________________________
consensus             GATATTTATCACGCATTTGTTAACTGAAGAACCCGAGAGGCTTGCAGGGCCGCTGCTCGC
 
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rJMFF020P09+          TGACACTTACGTGACACTGCTGAAAGGTCGCAATGCATGGTATGGCCAAATGATAGCGAA
rJMFF010L12+          TGACACTTACGTGACACTGCTGAAAGGTCGCAATGCATGGTATGGCCAAATGATAGCGAA
rJMFF010M03+          TGACACTTACGTGACACTGCTGAAAGGTCGCAATGCATGGTATGGCCAAATGATAGCGAA
                      ____________________________________________________________
consensus             TGACACTTACGTGACACTGCTGAAAGGTCGCAATGCATGGTATGGCCAAATGATAGCGAA
 
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rJMFF020P09+          GGGAGAACTGAGCCTGGATTTGGGAGACAGCATAAGCGGCAAAGGGACAATTCAGGGAGT
rJMFF010L12+          GGGAGAACTGAGCCTGGATTTGGGAGACAGCATAAGCGGCAAAGGGACAATTCAGGGAGT
rJMFF001C16+                        TGGATTTGGGAGACAGCATAAGCGGCAAAGGGACAATTCAGGGAGT
rJMFF010M03+          GGGAGAACTGAGCCTGGATTTGGGAGACAGCATAAGCGGCAAAGGGACAATTCAGGGAGT
                      ____________________________________________________________
consensus             GGGAGAACTGAGCCTGGATTTGGGAGACAGCATAAGCGGCAAAGGGACAATTCAGGGAGT
 
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rJMFF020P09+          TTCAGCTGTAGGAGCGTTTTATGAACTGNTAAGTCAATCCATTTTAAGCGTGTTACACCC
rJMFF010L12+          TTCAGCTGTAGGAGCGTTTTATGAACTGCTAAGTCAATCCATTTTAAGCGTGTTACACCC
rJMFF001C16+          TTCAGCTGTAGGAGCGTTTTATGAACTGCTAAGTCAATCCATTTTAAGCGTGTTACACCC
rJMFF010M03+          TTCAGCTGTAGGAGCGTTTTATGAACTGCTAAGTCAATCCATTTTAAGCGTGTTACACCC
                      ____________________________________________________________
consensus             TTCAGCTGTAGGAGCGTTTTATGAACTGCTAAGTCAATCCATTTTAAGCGTGTTACACCC
 
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rJMFF020P09+          GGGAGAGAACAAGCCAGTTGCTCCAGTCGAGCTTTGCCCCATCCTCAAGACGCTATACAA
rJMFF010L12+          GGGAGAGAACAAGCCAGTTGCTCCAGTCGAGCTTTGCCCCATCCTCAAGACGCTATACAA
rJMFF001C16+          GGGAGAGAACAAGCCAGTTGCTCCAGTCGAGCTTTGCCCCATCCTCAAGACGCTATACAA
rJMFF010M03+          GGGAGAGAACAAGCCAGTTGCTCCAGTCGAGCTTTGCCCCATCCTCAAGACGCTATACAA
                      ____________________________________________________________
consensus             GGGAGAGAACAAGCCAGTTGCTCCAGTCGAGCTTTGCCCCATCCTCAAGACGCTATACAA
 
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rJMFF020P09+          AATACTTATAACGAGGCAACAAAAGGTACAAGCTATTCTCCAAGCATTAAGGGACGAAAA
rJMFF010L12+          AATACTTATAACGAGGCAACAAAAGGTACAAGCTATTCTCCAAGCATTAAGGGACGAAAA
rJMFF001C16+          AATAATTATAACGAGGCAACAAAAGGTACAAGCTATTCTCCAAGCATTAAGGGACGAAAA
rJMFF010M03+          AATAATTATAACGAGGCAACAAAAGGTACAAGCTATTCTCCAATCATTAAGGGACGAAAA
                      ____________________________________________________________
consensus             AATACTTATAACGAGGCAACAAAAGGTACAAGCTATTCTCCAAGCATTAAGGGACGAAAA
 
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rJMFF020P09+          CCTGAACGATCCACGAGACAGAATAGAGATTGCACAAAGCCACGCGTTCTACAAGCCTTC
rJMFF010L12+          CCTGAACGATCCACGAGACAGAATAGAGATTGCACAAAGCCACGCGTTCTACAAGCCTTC
rJMFF001C16+          CCTGAACGATCCACGAGACAGAATAGAGATTGCACAAAGCCACGCGTTCTACAAGCCTTC
rJMFF010M03+          CCTGAACGATCCACGAGACAGAATAGAGATTGCACAAAGCCACGCGTTCTACAAGCCTTC
                      ____________________________________________________________
consensus             CCTGAACGATCCACGAGACAGAATAGAGATTGCACAAAGCCACGCGTTCTACAAGCCTTC
 
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rJMFF020P09+          ACTTCTCGGACAGCCTTGAGGCACTTGCATTGCCAACAAAAATCAGTAAAACCGAAGCTC
rJMFF010L12+          ACTTCTCGGACAGCCTTGAGGCACTTGCATTGCCAACAAAAATCAGTAAAACCGAAGCTC
rJMFF001C16+          ACTTCTCGGACAGCCTTGAGGCACTTGCATTGCCAACAAAAATCAGTAAAACCGAAGCTC
rJMFF010M03+          ACTTCTCGGACAGCCTTGAGGCACTTGCATTGCCAACAAAAATCAGTAAAACCGAAGCTC
                      ____________________________________________________________
consensus             ACTTCTCGGACAGCCTTGAGGCACTTGCATTGCCAACAAAAATCAGTAAAACCGAAGCTC
 
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rJMFF020P09+          AGCTCGTATCATTATATGTACATACAGTCCATTGTTGTTTGCTGGCAGAGCTGAGCTGCT
rJMFF010L12+          AGCTCGTATCATTATATGTACATACAGTCCATTGTTGTTTGCTGGCAGAGCTGAGCTGCT
rJMFF001C16+          AGCTCGTATCATTATATGTACATACAGTCCATTGTTGTTTGCTGGCAGAGCTGAGCTGCT
rJMFF010M03+          AGCTCGTATCATTATATGTACATACAGTCCATTGTTGTTTGCTGGCAGAGCTGAGCTGCT
                      ____________________________________________________________
consensus             AGCTCGTATCATTATATGTACATACAGTCCATTGTTGTTTGCTGGCAGAGCTGAGCTGCT
 
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rJMFF020P09+          AATTTCTCATCATTATATGTAACCTGGGATGCATTGTTCTGTTTGGTTCAAGATGTCTGT
rJMFF010L12+          AATTTCTCATCATTATATGTAACCTGGGATGCATTGTTCTGTTTGGTTCAAGATGTCTGT
rJMFF001C16+          AATTTCTCATCATTATATGTAACCTGGGATGCATTGTTCTGTTTGGTTCAAGATGTCTGT
rJMFF010M03+          AATTTCTCATCATTATATGTAACCTGGGATGCATTGTTCTGTTTGGTTCAAGATGTCTGT
                      ____________________________________________________________
consensus             AATTTCTCATCATTATATGTAACCTGGGATGCATTGTTCTGTTTGGTTCAAGATGTCTGT
 
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rJMFF020P09+          ACAAC-TATTTGAGATGTTTGTTAAACAAGATTCTCA                       
rJMFF010L12+          ACAAC                                                       
rJMFF001C16+          ACAACATATTTGAGATGTTTGTTAAACAAGATTCTCA                       
rJMFF010M03+          ACAAC-TATTTGAGATGTTTGTTAAACAAGATTCTCATGAAAGCAGAAAGCTTTTATTAT
                      ____________________________________________________________
consensus             ACAAC-TATTTGAGATGTTTGTTAAACAAGATTCTCATGAAAGCAGAAAGCTTTTATTAT