Contig 010994:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS069G07-                                                       GCAAATGCCGTTGAGG
                      ____________________________________________________________
consensus                                                         GCAAATGCCGTTGAGG
 
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JMFS069G07-           GGGCCTTGATCGGACAGGTGAATGCGATGCAACCAGCGTGCAGCGTTGATGCTGCATCTA
                      ____________________________________________________________
consensus             GGGCCTTGATCGGACAGGTGAATGCGATGCAACCAGCGTGCAGCGTTGATGCTGCATCTA
 
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JMFS069G07-           CGGATTCCATAATGAGCTGCAAAACCGAACCGAACTTCTGTTTCGCTAGACAACAGTCCA
                      ____________________________________________________________
consensus             CGGATTCCATAATGAGCTGCAAAACCGAACCGAACTTCTGTTTCGCTAGACAACAGTCCA
 
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JMFS069G07-           GTCTCTCGTTCTCTAATATCACTGGAGAGAGCTGTGCTGGAGATTATCAGGACTGTGGCG
rJMFF024N10+                       TAATATCACTGGAGAGAGCTGTNCTGGAGATTATCAGGACTGTGGCG
                      ____________________________________________________________
consensus             GTCTCTCGTTCTCTAATATCACTGGAGAGAGCTGTGCTGGAGATTATCAGGACTGTGGCG
 
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JMFS069G07-           CTTCCTCGATGCTCCTCATGGGAGAGCCGCCGTGGGGCCCGTCTGGTCCCGAGAATTCGT
rJMFF024N10+          CTTCCTCGATGCTCCTCATGGGAGAGCCGCCGTGGGGCCCGTCTGGTCCCGAGAATTCGT
                      ____________________________________________________________
consensus             CTTCCTCGATGCTCCTCATGGGAGAGCCGCCGTGGGGCCCGTCTGGTCCCGAGAATTCGT
 
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JMFS069G07-           TCCCGTCATCCGTCAGGAGCGATGCTGTGTTGCGCTACAAAGAAAAGAAAAAGACACGCA
rJMFF024N10+          TCCCGTCATCCGTCAGGAGCGATGCTGTGTTGCGCTACAAAGAAAAGAAAAAGACACGCA
                      ____________________________________________________________
consensus             TCCCGTCATCCGTCAGGAGCGATGCTGTGTTGCGCTACAAAGAAAAGAAAAAGACACGCA
 
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JMFS069G07-           CATTTGAAAAGCACGTGAGGTATGCTTCACGCAAGGCGAGAGCTGACGTTAGGAGGCGTG
rJMFF024N10+          CATTTGAAAAGCACGTGAGGTATGCTTCACGCAAGGCGAGAGCTGACGTTAGGAGGCGTG
                      ____________________________________________________________
consensus             CATTTGAAAAGCACGTGAGGTATGCTTCACGCAAGGCGAGAGCTGACGTTAGGAGGCGTG
 
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JMFS069G07-           TGAAGGGGCGGTTCGTCAAGGCTGGCGATGCTTATGATTACGACCCTCTCAGCCCAACCA
rJMFF024N10+          TGAAGGGGCGGTTCGTCAAGGCTGGCGATGCTTATGATTACGACCCTCTCAGCCCAACCA
                      ____________________________________________________________
consensus             TGAAGGGGCGGTTCGTCAAGGCTGGCGATGCTTATGATTACGACCCTCTCAGCCCAACCA
 
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JMFS069G07-           GAAGCTACTGAGAG                                              
rJMFF024N10+          GAAGCTACTGAGAGGAATCTCTCGCTTCCTCGAAGTGAGAAAACATTGGGCATGCAAAGA
rJMSF049H09+                       GGAATCTCTCGCTTCCTCGAAGTGAGAAAACATTGGGCATGCAAAGA
rJMFF010C07+                       GGAATCTCTCGCTTCCTCGAAGTGAGAAAACATTGGGCATGCAAAGA
                      ____________________________________________________________
consensus             GAAGCTACTGAGAGGAATCTCTCGCTTCCTCGAAGTGAGAAAACATTGGGCATGCAAAGA
 
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rJMFF024N10+          ACGATGCTTCAATTCCTCGCACAACATCAATCAGATTCAATATATCACGAAAGAATGGAT
rJMSF049H09+          ACGATGCTTCAATTCCTCGCACAACATCAATCAGATTCAATATATCACGAAAGAATGGAT
rJMFF010C07+          ACGATGCTTCAATTCCTCGCACAACATCAATCAGATTCAATATATCACGAAAGAATGGAT
                      ____________________________________________________________
consensus             ACGATGCTTCAATTCCTCGCACAACATCAATCAGATTCAATATATCACGAAAGAATGGAT
 
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rJMFF024N10+          CTCCTCAGATTCGTTGACACAACTAGACAAAAAACACTCTTCCCTCCATGGGCTCTCCCG
rJMSF049H09+          CTCCTCAGATTCGTTGACACAACTAGACAAAAAACACTCTTCCCTCCATGGGCTCTCCCG
rJMFF010C07+          CTCCTCAGATTCGTTGACACAACTAGACAAAAAACACTNTTCCCTCCATGGGCTCTCCCG
                      ____________________________________________________________
consensus             CTCCTCAGATTCGTTGACACAACTAGACAAAAAACACTCTTCCCTCCATGGGCTCTCCCG
 
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rJMFF024N10+          CATGGGGATTCAAATCACAACTCTTCGGCCTCCTCCTTTCACACAAAACAAACGAACGAT
rJMSF049H09+          CATGGGGATTCAAATCACAACTCTTCGGCCTCCTCCTTTCACACAAAACAAACGAACGAT
rJMFF010C07+          CATGGGGATTCAAATCACAACTNTTCGGCCTCCTCCTTTCACACAAAACAAACGAACGAT
                      ____________________________________________________________
consensus             CATGGGGATTCAAATCACAACTCTTCGGCCTCCTCCTTTCACACAAAACAAACGAACGAT
 
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rJMFF024N10+          GATCAAGTTTATACCGAGAATTCAATTCAAAGATCCCAGGTTTATCTGCCTTGATCAACT
rJMSF049H09+          GATCAAGTTTATACCGAGAATTCAATTCAAAGATCCCAGGTTTATCTGCCTTGATCAACT
rJMFF010C07+          GATCAAGTTTATACCGAGAATTCAATTCAAAGATCCCAGGTTTATNTGCCTTGATCAACT
                      ____________________________________________________________
consensus             GATCAAGTTTATACCGAGAATTCAATTCAAAGATCCCAGGTTTATCTGCCTTGATCAACT
 
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rJMFF024N10+          AACAGATGGATTCGGTTTCTGGTTCAGCCTCAGAGGATTGAAAAAAACCGCCTGTAATAT
rJMSF049H09+          AACAGATGGATTCGGTTTCTGGTTCAGCCTCAGAGGATTGAAAAAAACCGCCTGTAATAT
rJMFF010C07+          AACAGATGGATTCGGTTTNTGGTTCAGCCTCAGAGGA--AAAAAAAACCGCCTGTAATAT
                      ____________________________________________________________
consensus             AACAGATGGATTCGGTTTCTGGTTCAGCCTCAGAGGATTGAAAAAAACCGCCTGTAATAT
 
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rJMFF024N10+          TTTTCGTTCCTCTGTCAGTCTGTCGGTGTATATATTNTGACCAG                
rJMSF049H09+          TTTTCGTTCCTCTGTCAGTCTGTCTGTGTATATATTCTGACCAGCATGCAGTATTTAGGA
rJMFF010C07+          TTTTCGTTCCTCTGTCAGTCTGTCTGTGTATATATTCTGACCAGCATGCAGTATTTAGGA
                      ____________________________________________________________
consensus             TTTTCGTTCCTCTGTCAGTCTGTCTGTGTATATATTCTGACCAGCATGCAGTATTTAGGA
 
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rJMSF049H09+          GTTGAGTGACGACGATATCGATTGGTTCCCACTTCCCAGGATATATGACCATCAAAGAAG
rJMFF010C07+          GTTGAGTGACGACGATATCGATTGGTTCCCACTTCCCAGGATATATGACCATCAAAGAAG
                      ____________________________________________________________
consensus             GTTGAGTGACGACGATATCGATTGGTTCCCACTTCCCAGGATATATGACCATCAAAGAAG
 
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rJMSF049H09+          GCAAAGAAACTTAGTATTGTAATTTTTTCATTTGTTTTGTCGGAGACATTTACATATATG
rJMFF010C07+          GCAAAGAAACTTAGTATTGTAATTTTTTCATTTGTTTTGTCGGAGACATTTACATATATG
                      ____________________________________________________________
consensus             GCAAAGAAACTTAGTATTGTAATTTTTTCATTTGTTTTGTCGGAGACATTTACATATATG
 
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rJMSF049H09+          TTGTAGCTAGGTTGTCTGCCATGCATTCAACCCAGATT                      
rJMFF010C07+          TTGTAGCTAGGTTGTCTGCCATGCATTCAACCCAGATTATACAATAATATTCGCAAAATA
                      ____________________________________________________________
consensus             TTGTAGCTAGGTTGTCTGCCATGCATTCAACCCAGATTATACAATAATATTCGCAAAATA