Contig 010992:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009J09Sequence555003094 (4)ref|XP_009801863.1|1e-76PREDICTED: lysosomal beta glucosidase-like isoform X1 [Nicotiana sylvestris]703010992 (6)ref|XP_009760946.1|4e-37PREDICTED: lysosomal beta glucosidase-like [Nicotiana sylvestris]
JMFF012A22Sequence551003094 (4)ref|XP_009801863.1|1e-76PREDICTED: lysosomal beta glucosidase-like isoform X1 [Nicotiana sylvestris]706010992 (6)ref|XP_006361125.1|7e-71PREDICTED: lysosomal beta glucosidase-like [Solanum tuberosum]
JMFF024C02Sequence538003094 (4)ref|XP_009801863.1|5e-74PREDICTED: lysosomal beta glucosidase-like isoform X1 [Nicotiana sylvestris]705010992 (6)ref|XP_006361125.1|4e-70PREDICTED: lysosomal beta glucosidase-like [Solanum tuberosum]
JMFF033I20Sequence532003094 (4)ref|XP_009801863.1|1e-56PREDICTED: lysosomal beta glucosidase-like isoform X1 [Nicotiana sylvestris]746010992 (6)ref|XP_009786310.1|4e-105PREDICTED: lysosomal beta glucosidase-like [Nicotiana sylvestris] ref|XP_0097863
JMFN016A04Sequence544010992 (6)ref|XP_011044008.1|9e-57PREDICTED: lysosomal beta glucosidase-like [Populus euphratica]
JMFS048A05Sequence599010992 (6)ref|XP_011044008.1|2e-65PREDICTED: lysosomal beta glucosidase-like [Populus euphratica]

Alignment

This contig is upended


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rJMFF033I20+                                                     TTCTGAAGAATGGGAAG
                      ____________________________________________________________
consensus                                                        TTCTGAAGAATGGGAAG
 
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rJMFF033I20+          AATGCCCATTATCCATTGCTGCCACTCCCTAAAAAAACAGCAAAGATTCTTGTGGCTGGA
                      ____________________________________________________________
consensus             AATGCCCATTATCCATTGCTGCCACTCCCTAAAAAAACAGCAAAGATTCTTGTGGCTGGA
 
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rJMFF033I20+          ACTCATGCAGACAACTTGGGGTTCCAATGTGGTGGCTGGACTATTGAATGGCAAGGTGTT
                      ____________________________________________________________
consensus             ACTCATGCAGACAACTTGGGGTTCCAATGTGGTGGCTGGACTATTGAATGGCAAGGTGTT
 
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rJMFF033I20+          GCAGGCAATGATCTCACTGTGGGAACCACCATTTTAACTGCTGTGAAGAAAACCGTTGAT
rJMFF012A22+                                GAACCACCATTTTAACTGCTGTGAAGAAAACCGTTGAT
JMFS048A05-                                                            AAACCGTTGAT
rJMFF024C02+                                GAACCACCATTTTAACTGCTGTGAAGAAAACCGTTGAT
                      ____________________________________________________________
consensus             GCAGGCAATGATCTCACTGTGGGAACCACCATTTTAACTGCTGTGAAGAAAACCGTTGAT
 
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rJMFF033I20+          CCTTCAACACAAGTGGTGTTCCAGGAGAATCCCGACGCGGAATTCGTGAAATCCGGCGGT
rJMFF012A22+          CCTTCAACACAAGTGGTGTTCCAGGAGAATCCCGACGCGGAATTCGTGAAATCCGGCGGT
JMFS048A05-           CCTTCAACACAAGTGGTGTTCCAGGAGAATCCCGACGCGGAATTCGTGAAATCCGGCGGT
JMFN016A04-                                          CCGACGCGGAATTCGTGAAATCCGGCGGT
rJMFF024C02+          CCTTCAACACAAGTGGTGTTCCAGGAGAATCCCGACGCGGAATTCGTGAAATCCGGCGGT
                      ____________________________________________________________
consensus             CCTTCAACACAAGTGGTGTTCCAGGAGAATCCCGACGCGGAATTCGTGAAATCCGGCGGT
 
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rJMFF033I20+          TTCTCCTACGCCATAGTTGTCGTCGGCGAGGTGACGTACGCGGAGATGTTCGGCGACAGC
rJMFF012A22+          TTCTCCTACGCCATAGTTGTCGTCGGCGAGGTGACGTACGCGGAGATGTTCGGCGACAGC
JMFS048A05-           TTCTCCTACGCCATAGTTGTCGTCGGCGAGGTGACGTACGCGGAGATGTTCGGCGACAGC
JMFN016A04-           TTCTCCTACGCCATAGTTGTCGTCGGCGAGGTGACGTACGCGGAGATGTTCGGCGACAGC
rJMFF024C02+          TTCTCCTACGCCATAGTTGTCGTCGGCGAGGTGACGTACGCGGAGATGTTCGGCGACAGC
                      ____________________________________________________________
consensus             TTCTCCTACGCCATAGTTGTCGTCGGCGAGGTGACGTACGCGGAGATGTTCGGCGACAGC
 
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rJMFF033I20+          GGCAACCTCACCATAGCCGGAACCGGCGGCAGCGCGATAAACAGCGTCTGCGGGGCGGTG
rJMFF012A22+          GGCAACCTCACCATAGCCGGAACCGGCGGCAGCGCGATAAACAGCGTCTGCGGGGCGGTG
JMFS048A05-           GGCAACCTCACCATAGCCGGAACCGGCGGCAGCGCGATAAACAGCGTCTGCGGGGCGGTG
JMFN016A04-           GGCAACCTCACCATAGCCGGAACCGGCGGCAGCGCGATAAACAGCGTCTGCGGGGCGGTG
rJMFF024C02+          GGCAACCTCACCATAGCCGGAACCGGCGGCAGCGCGATAAACAGCGTCTGCGGGGCGGTG
rJMFF009J09+                           CGGAACCGGCGGCAGCGCGATAAACAGCGTCTGCGGGGCGGTG
                      ____________________________________________________________
consensus             GGCAACCTCACCATAGCCGGAACCGGCGGCAGCGCGATAAACAGCGTCTGCGGGGCGGTG
 
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rJMFF033I20+          AAATGCGTGGTGGTGGTGGTTTCCGGCCGCCCAGTCGTGATAGAGCCCTACGTGGCCAAA
rJMFF012A22+          AAATGCGTGGTGGTGGTGGTTTCCGGCCGCCCAGTCGTGATAGAGCCCTACGTGGCCAAA
JMFS048A05-           AAATGCGTGGTGGTGGTGGTTTCCGGCCGCCCAGTCGTGATAGAGCCCTACGTGGCCAAA
JMFN016A04-           AAATGCGTGGTGGTGGTGGTTTCCGGCCGCCCAGTCGTGATAGAGCCCTACGTGGCCAAA
rJMFF024C02+          AAATGCGTGGTGGTGGTGGTTTCCGGCCGCCCAGTCGTGATAGAGCCCTACGTGGCCAAA
rJMFF009J09+          AAATGCGTGGTGGTGGTGGTTTCCGGCCGCCCAGTCGTGATAGAGCCCTACGTGGCCAAA
                      ____________________________________________________________
consensus             AAATGCGTGGTGGTGGTGGTTTCCGGCCGCCCAGTCGTGATAGAGCCCTACGTGGCCAAA
 
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rJMFF033I20+          ATGGACGCCCTTGTGGCCGCTTGGCTGCCGGGAACGGAAGGGCAGGGCGTCGCCGACGTG
rJMFF012A22+          ATGGACGCCCTTGTGGCCGCTTGGCTGCCGGGAACGGAAGGGCAGGGCGTCGCCGACGTG
JMFS048A05-           ATGGACGCCCTTGTGGCCGCTTGGCTGCCGGGAACGGAAGGGCAGGGCGTCGCCGACGTG
JMFN016A04-           ATGGACGCCCTTGTGGCCGCTTGGCTGCCGGGAACGGAAGGGCAGGGCGTCGCCGACGTG
rJMFF024C02+          ATGGACGCCCTTGTGGCCGCTTGGCTGCCGGGAACGGAAGGGCAGGGCGTCGCCGACGTG
rJMFF009J09+          ATGGACGCCCTTGTGGCCGCTTGGCTGCCGGGAACGGAAGGGCAGGGCGTCGCCGACGTG
                      ____________________________________________________________
consensus             ATGGACGCCCTTGTGGCCGCTTGGCTGCCGGGAACGGAAGGGCAGGGCGTCGCCGACGTG
 
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rJMFF033I20+          CTGTTCGGCGACTACGGCTTCACCGGCAAGCTGGCTCGCACTTGGTTCCGGTCGGTGGAT
rJMFF012A22+          CTGTTCGGCGACTACGGCTTCACCGGCAAGCTGGCTCGCACTTGGTTCCGGTCGGTGGAT
JMFS048A05-           CTGTTCGGCGACTACGGCTTCACCGGCAAGCTGGCTCGCACTTGGTTCCGGTCGGTGGAT
JMFN016A04-           CTGTTCGGCGACTACGGCTTCACCGGCAAGCTGGCTCGCACTTGGTTCCGGTCGGTGGAT
rJMFF024C02+          CTGTTCGGCGACTACGGCTTCACCGGCAAGCTGGCTCGCACTTGGTTCCGGTCGGTGGAT
rJMFF009J09+          CTGTTCGGCGACTACGGCTTCACCGGCAAGCTGGCTCGCACTTGGTTCCGGTCGGTGGAT
                      ____________________________________________________________
consensus             CTGTTCGGCGACTACGGCTTCACCGGCAAGCTGGCTCGCACTTGGTTCCGGTCGGTGGAT
 
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rJMFF033I20+          CAGCTCCCCATGAACGTCGGAGATAGCCATTACGATCCCTTGTTCCCCTTCGGATTTGGA
rJMFF012A22+          CAGCTCCCCATGAACGTCGGAGATAGCCATTACGATCCCTTGTTCCCCTTCGGATTTGGA
JMFS048A05-           CAGCTCCCCATGAACGTCGGAGATAGCCATTACGATCCCTTGTTCCCCTTCGGATTTGGA
JMFN016A04-           CAGCTCCCCATGAACGTCGGAGATAGCCATTACGATCCCTTGTTCCCCTTCGGATTTGGA
rJMFF024C02+          CAGCTCCCCATGAACGTCGGAGATAGCCATTACGATCCCTTGTTCCCCTTCGGATTTGGA
rJMFF009J09+          CAGCTCCCCATGAACGTCGGAGATAGCCATTACGATCCCTTGTTCCCCTTCGGATTTGGA
                      ____________________________________________________________
consensus             CAGCTCCCCATGAACGTCGGAGATAGCCATTACGATCCCTTGTTCCCCTTCGGATTTGGA
 
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rJMFF033I20+          CTCACAACTAAGCCTCTGTGAATTGAAGCCATGAAAATTTAAGGTTGTTATCAGGATTCA
rJMFF012A22+          CTCACAACTAAGCCTCTGTGAATTGAAGCCATGAAAATTTAAGGTTGTTATCAGGATTCA
JMFS048A05-           CTCACAACTAAGCCTCTGTGAATTGAAGCCATGAAAATTTAAGGTTGTTATCAGGATTCA
JMFN016A04-           CTCACAACTAAGCCTCTGTGAATTGAAGCCATGAAAATTTAAGGTTGTTATCAGGATTCA
rJMFF024C02+          CTCACAACTAAGCCTCTGTGAATTGAAGCCATGAAAATTTAAGGTTGTTATCAGGATTCA
rJMFF009J09+          CTCACAACTAAGCCTCTGTGAATTGAAGCCATGAAAATTTAAGGTTGTTATCAGGATTCA
                      ____________________________________________________________
consensus             CTCACAACTAAGCCTCTGTGAATTGAAGCCATGAAAATTTAAGGTTGTTATCAGGATTCA
 
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rJMFF033I20+          CTGATATGATGCCATTGTTGAACAGAACAGACAAGACAATTTGAATGTTCCAGACAAGAT
rJMFF012A22+          CTGATATGATGCCATTGTTGAACAGAACAGACAAGACAATTTGAATGTTCCAGACAAGAT
JMFS048A05-           CTGATATGATGCCATTGTTGAACAGAACAGNNACAGACATTTGAATGTTCCAGACAAGAT
JMFN016A04-           CTGATATGATGCCATTGTTGAACAGAACAGACAAGACAATTTGAATGTTCCAGACAAGAT
rJMFF024C02+          CTGATATGATGCCATTGTTGAACAGAACAGACAAGACAATTTGAATGTTCCAGACAAGAT
rJMFF009J09+          CTGATATGATGCCATTGTTGAACAGAACAGACAAGACAATTTGAATGTTCCAGACAAGAT
                      ____________________________________________________________
consensus             CTGATATGATGCCATTGTTGAACAGAACAGACAAGACAATTTGAATGTTCCAGACAAGAT
 
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rJMFF033I20+          CCCACGATT                                                   
rJMFF012A22+          CCCACGATTTATGCATGTTGTCTGAAAGTTCAATCAATTTTACTCCGTATTAAATTTGTT
JMFS048A05-           CCCACGATTTATGCATGTTGTCTGAAAGTTCAATCAATTTTACTCCGT            
JMFN016A04-           CCCACGATTTATGCATGTTGTCTGAAAGTTCAATC                         
rJMFF024C02+          CCCACGATTTATGCATGTTGTCTGAAAGTTCAATCAATTTTACTCCGTATTAAATTTGTT
rJMFF009J09+          CCCACGATTTATGCATGTTGTCTGAAAGTTCAATCAATTTTACTCCGTATTAAATTTGTT
                      ____________________________________________________________
consensus             CCCACGATTTATGCATGTTGTCTGAAAGTTCAATCAATTTTACTCCGTATTAAATTTGTT
 
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rJMFF012A22+          TTGTTTGTGTTTTTTGACTTTTTAATTATGTTATCTAATTATTCCAGATGTTTATAATTA
rJMFF024C02+          TTGTTTGTGTTTTTTGACTTTTTAATTATGTTATCTAATTATTCCAGATGTTTATAATTA
rJMFF009J09+          TTGTTTGTGTTTTTTGACTTTTTAATTATGTTATCTAATTATTCCAGATGTTTATAATTA
                      ____________________________________________________________
consensus             TTGTTTGTGTTTTTTGACTTTTTAATTATGTTATCTAATTATTCCAGATGTTTATAATTA
 
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rJMFF012A22+          CTAATA                                                      
rJMFF024C02+          CTAATA                                                      
rJMFF009J09+          CTAATAATATAATTCAATCCACCGGAGTATAATCGTATAAAAATGTGATCTTTGGATACT
                      ____________________________________________________________
consensus             CTAATAATATAATTCAATCCACCGGAGTATAATCGTATAAAAATGTGATCTTTGGATACT
 
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rJMFF009J09+          TCAATAATCCTTGTCTTTGTGTTGTATGACATAAAATCCATATTTAATGTCAATCTTTTG
                      ____________________________________________________________
consensus             TCAATAATCCTTGTCTTTGTGTTGTATGACATAAAATCCATATTTAATGTCAATCTTTTG
 
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rJMFF009J09+          TGTTTCATATGTAATTTGGTAATTGGTAATTTCGTTATTTAGTTACATCCAAAAAAAGGA
                      ____________________________________________________________
consensus             TGTTTCATATGTAATTTGGTAATTGGTAATTTCGTTATTTAGTTACATCCAAAAAAAGGA