Contig 010991:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009H17Sequence587010991 (4)dbj|BAF46310.1|2e-92SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]794010991 (4)dbj|BAF46310.1|8e-119SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]
JMFF009H18Sequence148010991 (4)dbj|BAF46310.1|9e-15SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]
JMSF001F11Sequence369010991 (4)dbj|BAF46310.1|2e-54SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]715008971 (6)dbj|BAF46310.1|4e-147SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]

Alignment

This contig is upended


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rJMFF009H17-                                                        TTTCTTATTAATTT
                      ____________________________________________________________
consensus                                                           TTTCTTATTAATTT
 
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rJMFF009H17-          TAAGGTAAGAATTTATTACATTGAGAATATTTCTTAATTCTCGAGATACAGATAGTTGTG
                      ____________________________________________________________
consensus             TAAGGTAAGAATTTATTACATTGAGAATATTTCTTAATTCTCGAGATACAGATAGTTGTG
 
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rJMFF009H18-                      CATACAAAGGGTATTTTGAGCTAGCCTTCCACAGCCAGAGGGTTGANT
rJMFF009H17-          TGACCAAGTATTCATACAAAGGGTATTTTGAGCTAGCCTTCCACAGCCAAAGGGTTGATT
                      ____________________________________________________________
consensus             TGACCAAGTATTCATACAAAGGGTATTTTGAGCTAGCCTTCCACAGCCAGAGGGTTGATT
 
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rJMFF009H18-          ACGACATCCTGCATAGCTACTNACTTTGACTTCCCACCATACTCTTCTGGCAGCTCATCT
rJMFF009H17-          ACAACATCCTGCATAGCTACAAACTTTGACTTCCCACCATACTCTTCTGGCAACTCATCT
                      ____________________________________________________________
consensus             ACGACATCCTGCATAGCTACTAACTTTGACTTCCCACCATACTCTTCTGGCAGCTCATCT
 
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rJMFF009H18-          TCTCCTACTTCTCTCATCAACTGNNACCTTTCCTCTTCAT                    
rJMFF009H17-          TCTCCTACTTCTCTCATCAACTGCAACCTTTCCTCTTCATTGCTAACAATCACAATCTTT
                      ____________________________________________________________
consensus             TCTCCTACTTCTCTCATCAACTGCAACCTTTCCTCTTCATTGCTAACAATCACAATCTTT
 
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rJMFF009H17-          TCAAGAGTTGCTTTCTCAAGGAAACGGGAAACCAACTTCCAGACAGCAACGAAGAATAGT
                      ____________________________________________________________
consensus             TCAAGAGTTGCTTTCTCAAGGAAACGGGAAACCAACTTCCAGACAGCAACGAAGAATAGT
 
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JMFF009H17+                                                                   CAAT
rJMFF009H17-          GGCATGTGTAATAGGTAAAACTTGGCTAAGCGTTCAGGGTAGTAAGCCTGTAAGAACAAT
                      ____________________________________________________________
consensus             GGCATGTGTAATAGGTAAAACTTGGCTAAGCGTTCAGGGTAGTAAGCCTGTAAGAACAAT
 
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JMFF009H17+           CAACTTTTCGCTTCCTATTTCTCCATCCTTCGAAGAACTTGCAAGTGTTTTGTCTAGAAG
rJMFF009H17-          CAACTTTTCGCTTCCTATTTCTCCATCCTTCGAAGAACTTGCAAGTGTTTTGTCTAGAAG
                      ____________________________________________________________
consensus             CAACTTTTCGCTTCCTATTTCTCCATCCTTCGAAGAACTTGCAAGTGTTTTGTCTAGAAG
 
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JMFF009H17+           GTGAACCACAAATTTCTTAAATTGGAGTTGATCCTTGGCAGGAAAATGATTGCGACCTTT
rJMFF009H17-          GTGAACCACAAATTTCTTAAATTGGAGTTGATCCTTGGCAGGAAAATGATTGCGACCTTT
                      ____________________________________________________________
consensus             GTGAACCACAAATTTCTTAAATTGGAGTTGATCCTTGGCAGGAAAATGATTGCGACCTTT
 
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JMFF009H17+           CACGATCATAACTGGGAACCCATTTTTGGATAATCCTTGTAAGCAAATCTTCCTAGATTC
JMSF001F11+                                  TTTTGGATAATCCTTGTAAGCAAATCTTCCTAGATTC
rJMFF009H17-          CACGATCATAACTGGGAACCCATTTTTGGATAATCCTTGTAAGCAAATCTTCCTAGATTC
                      ____________________________________________________________
consensus             CACGATCATAACTGGGAACCCATTTTTGGATAATCCTTGTAAGCAAATCTTCCTAGATTC
 
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JMFF009H17+           CAGTTCATCTGGCACTTCAGAGTCAGGAATATATCCGAGCGGAACAAAAGCAGCTCTCCA
JMSF001F11+           CAGTTCATCTGGCACTTCAGAGTCAGGAATATATCCGAGCGGAACAAAAGCAGCTCTCCA
rJMFF009H17-          CAGTTCATCTGGCACTTCAGAGTCAGGAATATATCCGAGCGGAACAAAAGCAGCTCTCCA
                      ____________________________________________________________
consensus             CAGTTCATCTGGCACTTCAGAGTCAGGAATATATCCGAGCGGAACAAAAGCAGCTCTCCA
 
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JMFF009H17+           TTGCCGCCATTGCACAAACATCTTGGCTGCCTTTTCTGGGTCCATTGCTCTTGCAATCAA
JMSF001F11+           TTGCCGCCATTGCACAAACATCTTGGCTGCCTTTTCTGGGTCCATTGCTCTTGCAATCAA
rJMFF009H17-          TTGCCGCCATTGCACAAACATCTTGGCTGCCTTTTCTGGGTCCATTGCTCTTGCAATCAA
                      ____________________________________________________________
consensus             TTGCCGCCATTGCACAAACATCTTGGCTGCCTTTTCTGGGTCCATTGCTCTTGCAATCAA
 
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JMFF009H17+           GAACCTCATAAGAGTTGGGTCACCGTAGCTCT                            
JMSF001F11+           GAACCTCATAAGAGTTGGGTCACCGTAGCTCT                            
rJMFF009H17-          GAACCTCATAAGAGTTGGGTCACCGTAGCTCTCTGTAGAAGAACCAAGCTTCTCAACTGA
                      ____________________________________________________________
consensus             GAACCTCATAAGAGTTGGGTCACCGTAGCTCTCTGTAGAAGAACCAAGCTTCTCAACTGA
 
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rJMFF009H17-          CTTCCTTATCTGGGTCAGTGCAAGCTCTTCTTGTGCTCTTTCCATTTTTCCAAATCTGAA
                      ____________________________________________________________
consensus             CTTCCTTATCTGGGTCAGTGCAAGCTCTTCTTGTGCTCTTTCCATTTTTCCAAATCTGAA