| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009C23 | Sequence | 536 | 006599 (3) | ref|XP_009781171.1| | 5e-77 | PREDICTED: cytochrome P450 CYP72A219-like, partial [Nicotiana sylvestris] | 785 | 010988 (3) | ref|XP_004243253.1| | 8e-71 | PREDICTED: cytochrome P450 CYP72A219 [Solanum lycopersicum] |
| JMSF034D22 | Sequence | 669 | 006599 (3) | ref|XP_009781171.1| | 2e-87 | PREDICTED: cytochrome P450 CYP72A219-like, partial [Nicotiana sylvestris] | 674 | 010988 (3) | ref|XP_004243253.1| | 2e-88 | PREDICTED: cytochrome P450 CYP72A219 [Solanum lycopersicum] |
| JMSF041J08 | Sequence | 683 | 006599 (3) | ref|XP_009781171.1| | 1e-92 | PREDICTED: cytochrome P450 CYP72A219-like, partial [Nicotiana sylvestris] | 558 | 010988 (3) | ref|XP_004243253.1| | 1e-45 | PREDICTED: cytochrome P450 CYP72A219 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF034D22+ T
rJMFF009C23+ TTGTT
____________________________________________________________
consensus TTGTT
. : . : . : . : . : . :
rJMSF034D22+ GAGTAGGCATCAAGAATGGCAAACGCGAGCCAGAGAAGAGGTTTTGCAGCTATTTGGCCG
rJMFF009C23+ GAGTAGGCATCAAGAATGGCAAACGCGAGCCAGAGAAGAGGTTTTGCAGCTATTTGNCCG
____________________________________________________________
consensus GAGTAGGCATCAAGAATGGCAAACGCGAGCCAGAGAAGAGGTTTTGCAGCTATTTGGCCG
. : . : . : . : . : . :
rJMSF041J08+ TTTAAACGA
rJMSF034D22+ AGATAAACCCAAGCTTGAAGGATTAAATCGTTTGAAAATCGTGACGATGATTTTAAACGA
rJMFF009C23+ AGATAAACCCAAGCTNGAAGGATTAAATCGTTTGAAAATCGTGACGATGATTTTAAACGA
____________________________________________________________
consensus AGATAAACCCAAGCTTGAAGGATTAAATCGTTTGAAAATCGTGACGATGATTTTAAACGA
. : . : . : . : . : . :
rJMSF041J08+ GTCTTTGAGATTGTATCCNCCAGGGCCAACCATAACCAGGAGGACAAATGAAGAAACTAA
rJMSF034D22+ GTCTTTGAGATTGTATCCACCAGGGCCAACCATAACCAGGAGGACAAATGAAGAAACTAA
rJMFF009C23+ GTCTTTGAGATTGTATCCACCAGGGCCAACCATAACCAGGAGGACAAATGAAGAAACTAA
____________________________________________________________
consensus GTCTTTGAGATTGTATCCACCAGGGCCAACCATAACCAGGAGGACAAATGAAGAAACTAA
. : . : . : . : . : . :
rJMSF041J08+ ACTTGGGAATTTATTATTACCCCCGGGGGTTNTAATNTCAATACCAATTATNTTNTTGCN
rJMSF034D22+ ACTTGGGAATCTATTATTACCCCCGGGGGTTCTAATCTCAATACCAATTATCTTATTGCA
rJMFF009C23+ ACTTGGGAATCTATTATTACCCCCGGGGGTTCTAATNTCAATACCAATTATCTTATTGCA
____________________________________________________________
consensus ACTTGGGAATCTATTATTACCCCCGGGGGTTCTAATCTCAATACCAATTATCTTATTGCA
. : . : . : . : . : . :
rJMSF041J08+ CCATAATGAAGAATTNTGGGGCAATGATGCAAAAGAGTTTAAGCCNGAGAGATTCAGCGA
rJMSF034D22+ CCATAATGAAGAATTATGGGGCAATGATGCAAAAGAGTTTAAGCCAGAGAGATTCAGCGA
rJMFF009C23+ CCATAATGAAGAATTATGGGGCAATGATGCAAAAGAGTTTAAGCCAGAGAGATTCAGCGA
____________________________________________________________
consensus CCATAATGAAGAATTATGGGGCAATGATGCAAAAGAGTTTAAGCCAGAGAGATTCAGCGA
. : . : . : . : . : . :
rJMSF041J08+ AGGAGTTTCAAAAGNGANTAATGGACAGCTAGCCTTCCTCCCATTTGGCGGNGGNCCTNG
rJMSF034D22+ AGGAGTTTCAAAAGTGACTAATGGACAGCTAGCCTTCCTCCCATTTGGCGGTGGACCTCG
rJMFF009C23+ AGGAGTTTCAAAAGTGACTAATGGACAGCTAGCCTTCCTCCCATTTGGCGGTGGACCTCG
____________________________________________________________
consensus AGGAGTTTCAAAAGTGACTAATGGACAGCTAGCCTTCCTCCCATTTGGCGGTGGACCTCG
. : . : . : . : . : . :
rJMSF041J08+ AATATGCATCGGCCTAAACTTTACAATGCTTGAAAGTAAAANGGCGNNGGCTATGNTANT
rJMSF034D22+ AATATGCATCGGCCTAAACTTTACAATGCTTGAAAGTAAAATGGCGCTGGCTATGATACT
rJMFF009C23+ AATATGCATCGGCCTAAACTTTACAATGCTTGAAAGTAAAATGGCGCTGGCTATGATACT
____________________________________________________________
consensus AATATGCATCGGCCTAAACTTTACAATGCTTGAAAGTAAAATGGCGCTGGCTATGATACT
. : . : . : . : . : . :
rJMSF041J08+ GCAACGNTTCNCCTTCGAGNTCTNTCCATCATATACGCNCTNTCCCACCNCTGTCATCNC
rJMSF034D22+ GCAACGCTTCACCTTCGAGCTCTCTCCATCATATACGCACTCTCCCACCACTGTCATCAC
rJMFF009C23+ GCAACGCTTCACCTTCGAGCTNTNTCCATCATATACGCACTNTCCCACCACTGTCATCAC
____________________________________________________________
consensus GCAACGCTTCACCTTCGAGCTCTCTCCATCATATACGCACTCTCCCACCACTGTCATCAC
. : . : . : . : . : . :
rJMSF041J08+ TATTCATCCCCAATATGGNGCTCCCCTGCTTTTCCNCAAGNTATAACAGCTTAATNTAAC
rJMSF034D22+ TATTCATCCCCAATATGGTGCTCCCCTGCTTTTCCACAAGTTATAACAGCTTAATATAAC
rJMFF009C23+ TATTCATCCCCAATATGGTGCTCCCCTGCTTTTCCACAAGTTATAACAGCTTAATATAAC
____________________________________________________________
consensus TATTCATCCCCAATATGGTGCTCCCCTGCTTTTCCACAAGTTATAACAGCTTAATATAAC
. : . : . : . : . : . :
rJMSF041J08+ CTAGTATTGNTCATGCTTGTGTCAAAGATACGCAGNTCCTAGACTCAAATGTTGCCCNAT
rJMSF034D22+ CTAGTATTGATCATGCTTGTGTCAAAGATACGCAGATCCTAGACTCAAATGTTGCCCAAT
rJMFF009C23+ CTAGTATTGATCATGCTTGTGTCAAAGATACGCAGATCCTAGACTCAAATGTTGCCCAAT
____________________________________________________________
consensus CTAGTATTGATCATGCTTGTGTCAAAGATACGCAGATCCTAGACTCAAATGTTGCCCAAT
. : . : . : . : . : . :
rJMSF041J08+ NTACTCATAGGCTCAAATGCTACCCNATCTACTCAAATTGATTTGGAATCAANTTAATTA
rJMSF034D22+ CTACTCATAGGCTCAAATGCTACCCAATCTACTCAAATTGATTTGGAATCAATTTAATTA
rJMFF009C23+ NTACTCATAGGCTCAAATGCTACCCAATNTACTCAAATTGATTTGGAATCAATTTAATTA
____________________________________________________________
consensus CTACTCATAGGCTCAAATGCTACCCAATCTACTCAAATTGATTTGGAATCAATTTAATTA
. : . : . : . : . : . :
rJMSF041J08+ TTTTAT
rJMSF034D22+ TTTTAT
rJMFF009C23+ TTTTATTTTCTATTTAAGCATGTTTTTTTTTTAATATAGTATTAGTAGCAATAATATGTG
____________________________________________________________
consensus TTTTATTTTCTATTTAAGCATGTTTTTTTTTTAATATAGTATTAGTAGCAATAATATGTG
. : . : . : . : . : . :
rJMFF009C23+ TTTCTTTATAGCACAGAAGTTGTAATCCCTTTATATGGGGAAGTATTACACAAACTATAT
____________________________________________________________
consensus TTTCTTTATAGCACAGAAGTTGTAATCCCTTTATATGGGGAAGTATTACACAAACTATAT