Contig 010987:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009A19Sequence637010987 (7)ref|XP_006367417.1|3e-41PREDICTED: MFP1 attachment factor 1-like [Solanum tuberosum]
JMFF039J07Sequence460010987 (7)ref|XP_006367417.1|2e-40PREDICTED: MFP1 attachment factor 1-like [Solanum tuberosum]726010987 (7)ref|XP_006367417.1|8e-41PREDICTED: MFP1 attachment factor 1-like [Solanum tuberosum]
JMFN007D22Sequence607010987 (7)ref|XP_006367417.1|2e-41PREDICTED: MFP1 attachment factor 1-like [Solanum tuberosum]
JMFN025N04Sequence527010987 (7)ref|XP_009799623.1|1e-12PREDICTED: MFP1 attachment factor 1-like [Nicotiana sylvestris]
JMSF006O11Sequence278010987 (7)ref|XP_004141279.1|3e-23PREDICTED: MFP1 attachment factor 1-like [Cucumis sativus] ref|XP_004163241.1| P161010987 (7)ref|XP_009360157.1|1e-05PREDICTED: MFP1 attachment factor 1-like [Pyrus x bretschneideri]

Alignment

This contig is upended


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rJMFF039J07-                                                      AAGGAAACATTGAAGC
                      ____________________________________________________________
consensus                                                         AAGGAAACATTGAAGC
 
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JMFN025N04+                                  AAGATCTAATAGTATGAGCATTGTATAAAAGATCTTA
rJMFF039J07-          TAATTACTGAAACAACATATAATAAGATCTAATAGTATGAGCATTGTATAAAAGATCTTA
rJMFF009A19-                                 AAGATCTAATAGTATGAGCATTGTATAAAAGATCTTA
                      ____________________________________________________________
consensus             TAATTACTGAAACAACATATAATAAGATCTAATAGTATGAGCATTGTATAAAAGATCTTA
 
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JMFN025N04+           AAACCACATAGACAGCAGAATTAGATCTCAATCAATTCTCAACATCGGCCAAGGAGCAGT
rJMFF039J07-          AAACCACATAGACAGCAGAATTAGACCTCAATCAATTCTCAACATCGGCCAAGGAGCAGT
JMFN007D22+                        AGCAGAATTAGATCTCAATCAATTCTCAACATCGGCCAAGGAGCAGT
rJMFF009A19-          AAACCACATAGACAGCAGAATTAGATCTCAATCAATTCTGAACATCGGCCAAGGAGCAGT
                      ____________________________________________________________
consensus             AAACCACATAGACAGCAGAATTAGATCTCAATCAATTCTCAACATCGGCCAAGGAGCAGT
 
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JMFN025N04+           TCAATTAACCGAAACCCTAGTATTTCAATTTTCAACTGCAAATATAGTAAAAGAACACTA
rJMFF039J07-          TCAATTAACCGAAACCCTAGTATTTCAATTTTCAACTGCAAATATAGTAAAAGAACACTA
JMFN007D22+           TCAATTAACCGAAACCCTAGTATTTCAATTTTCAACTGCAAATATAGTAAAAGAACACTA
rJMFF009A19-          TCAATTAACCGAAACCCTAGTATTTCAATTTTCAACTGCAAATATAGTAAAAGAACACTA
                      ____________________________________________________________
consensus             TCAATTAACCGAAACCCTAGTATTTCAATTTTCAACTGCAAATATAGTAAAAGAACACTA
 
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JMFN025N04+           GAAAACCTCAATGCACATTTCACGGCTCCGTCTTAACATCCGAGACTTCCTCACCGGGAA
rJMFF039J07-          GAAAACCTCAATGCACATTTCACGGCTCCGTCTTAACATCCGAGACTTCCTCACCGGGAA
rJMSF006O11-                                                  CGAGACTTCCTCACCGGGAA
JMFN007D22+           GAAAACCTCAATGCACATTTCACGGCTCCGTCTTAACATCCGAGACTTCCTCACCGGGAA
JMFF039J07+                                                                   GGAA
rJMFF009A19-          GAAAACCTCAATGCACATTTCACGGCTCCGTCTTAACATCCGAGACTTCCTCACCGGGAA
                      ____________________________________________________________
consensus             GAAAACCTCAATGCACATTTCACGGCTCCGTCTTAACATCCGAGACTTCCTCACCGGGAA
 
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JMFN025N04+           CAGAGCCAACAGCGGCCTCCTCACCCTCCACAGACGGCTTACCCTCCGGCGCGGCGGCGG
rJMFF039J07-          CAGAGCCAACAGCGGCCTCCTCACCCTCCACAGACGGCTTACCCTCCGGCGCGGCGGCGG
rJMSF006O11-          CANAGCCNACAGCGGCCTCCTCANCCTCNACAGACGGGTTANNCTCNGGCGCGGCGGCGG
JMFN007D22+           CAGAGCCAACAGCGGCCTCCTCACCCTCCACAGACGGCTTACCCTCCGGCGCGGCGGCGG
JMFF039J07+           CAGAGCCAACAGCGGCCTCCTCACCCTCCACAGACGGCTTACCCTCCGGCGCGGCGGCGG
rJMFF009A19-          CAGAGCCAACAGCGGCCTCCTCACCCTCCACAGACGGCTTACCCTCCGGCGCGGCGGCGG
                      ____________________________________________________________
consensus             CAGAGCCAACAGCGGCCTCCTCACCCTCCACAGACGGCTTACCCTCCGGCGCGGCGGCGG
 
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JMFN025N04+           CAGATCTGGACTTGACGGTGTCGAGCATGCGCTTACTGATCTCCTTGGAATAAAGCTGGA
rJMFF039J07-          CAGATCTGGACTTGACGGTGTCGAGCATGCGCTTACTGATCTCCTTGGAATAAAGCTGGA
rJMSF006O11-          CAGATCTGGACTTGACGGTGTCGAGGATGCGCTTACTGATCTNCTTGGANTAAAGCTGGA
JMFN007D22+           CAGATCTGGACTTGACGGTGTCGAGCATGCGCTTACTGATCTCCTTGGAATAAAGCTGGA
JMFF039J07+           CAGATCTGGACTTGACGGTGTCGAGCATGCGCTTACTGATCTCCTTGGAATAAAGCTGGA
rJMFF009A19-          CAGATCTGGACTTGACGGTGTCGAGCATGCGCTTACTGATCTCCTTGGAATAAAGCTGGA
                      ____________________________________________________________
consensus             CAGATCTGGACTTGACGGTGTCGAGCATGCGCTTACTGATCTCCTTGGAATAAAGCTGGA
 
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JMFN025N04+           GGATCTCGATGCCGTCGTCGTCGGCAGAGGCAGACGCCGCGGCGAAGTTATACGCCTCCT
rJMFF039J07-          GGATCTCGATGCCGTCGTCGTCGGCAGAGGCAGACGCCGCGGCGAAGTTATACGCCTCCT
rJMSF006O11-          CGATCGCGATGCCGTCGT                                          
JMFN007D22+           GGATCTCGATGCCGTCGTCGTCGGCAGAGGCAGACGCCGCGGCGAAGTTATACGCCTCCT
JMFF039J07+           GGATCTCGATGCCGTCGTCGTCGGCAGAGGCAGACGCCGCGGCGAAGTTATACGCCTCCT
JMSF006O11+                        GTCGTCGTCGGCAGAGGCAGACGCCGCGGCGAAGTTATACGCCTCCT
rJMFF009A19-          GGATCTCGATGCCGTCGTCGTCGGCAGAGGCAGACGCCGCGGCGAAGTTATACGCCTCCT
                      ____________________________________________________________
consensus             GGATCTCGATGCCGTCGTCGTCGGCAGAGGCAGACGCCGCGGCGAAGTTATACGCCTCCT
 
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JMFN025N04+           CCTCAATCTGCTTGGCGACATCGGAG                                  
rJMFF039J07-          CCTCAATCTGCTTGGCGACCTCGGAGGCCTCCTCCTGGGAAATGGTGCCGTAACGCTTGG
JMFN007D22+           CCTCAATCTGCTTGGCGACCTCGGAGGCCTCCTCCTGGGAAATGGTGCCGTAACGCTTGG
JMFF039J07+           CCTCAATCTGCTTGGCGACCTCGGAGGCCTCCTCCTGGGAAATGGTGCCGTAACGCTTGG
JMSF006O11+           CCTCAATCTGCTTGGCGACCTCGGAGGCCTCCTCCTGGGAAATGGTGCCGTAACGCTTGG
rJMFF009A19-          CCTCAATCTGCTTGGCGACCTCGGAGGCCTCCTCCTGGGAAATGGTGCCGTAACGCTTGG
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consensus             CCTCAATCTGCTTGGCGACCTCGGAGGCCTCCTCCTGGGAAATGGTGCCGTAACGCTTGG
 
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rJMFF039J07-          ACAAGATGGACGGCGAGGCGAGCGTCTCGATGAGGCGGTTGATAACGGCGTCGCGAGTCT
JMFN007D22+           ACAAGATGGACGGCGAGGCGAGCGTCTCGATGAGGCGGTTGATAACGGCGTCGCGAGTCT
JMFF039J07+           ACAAGATGGACGGCGAGGCGAGCGTCTCGATGAGGCGGTTGATAACGGCGTCGCGAGTCT
JMSF006O11+           ACAAGATGGACGGCGAGGCGAGCGTCTCGATGAGGCGGTTGATAACGGCGTCGCGAGTCT
rJMFF009A19-          ACAAGATGGACGGCGAGGCGAGCGTCTCGATGAGGCGGTTGATAACGGCGTCGCGAGTCT
                      ____________________________________________________________
consensus             ACAAGATGGACGGCGAGGCGAGCGTCTCGATGAGGCGGTTGATAACGGCGTCGCGAGTCT
 
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rJMFF039J07-          TCTGAGTCGGCGGCCAGATGCTGAAGGAG                               
JMFN007D22+           TCTGAGTCGGCGGCCAGATGCTGAAGGAG                               
JMFF039J07+           TCTGAGTCGGCGGCCAGATGCTGAAGGAG                               
JMSF006O11+           TCTGAGTCGGCGGCCAGATGCTGAAGGAGGCCTCCACGGCCATGGGCTTCTTCGGAGCTT
rJMFF009A19-          TCTGAGTCGGCGGCCAGATGCTGAAGGAGGCCTCCACGGCCATGGGCTTCTTCGGAGCTT
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consensus             TCTGAGTCGGCGGCCAGATGCTGAAGGAGGCCTCCACGGCCATGGGCTTCTTCGGAGCTT
 
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JMSF006O11+           CCGAAGCGGCGGCAGTCTCCAGAGCTGATTCGACTTCGGACATGTTCGTC          
rJMFF009A19-          CCGAAGCGGCGGCAGTCTCCAGAGCTGATTCGACTTCGGACATGTTCGTCAAAGCTTCTT
                      ____________________________________________________________
consensus             CCGAAGCGGCGGCAGTCTCCAGAGCTGATTCGACTTCGGACATGTTCGTCAAAGCTTCTT