Contig 010986:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF015K11+                                                         GAAAGCAGAGTGC
                      ____________________________________________________________
consensus                                                            GAAAGCAGAGTGC
 
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rJMSF015K11+          TGAACTAGACTATCTGGAAGAACACATGTAGAGTCATCGGTGCCCCNTGAAGATGACAGT
rJMSF003J10+           GAACTAGACTNTCTGGAAGAACACATGTAGAGTCATCGGTGCCCCTTGAAGATGACAGT
                      ____________________________________________________________
consensus             TGAACTAGACTATCTGGAAGAACACATGTAGAGTCATCGGTGCCCCTTGAAGATGACAGT
 
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rJMSF015K11+          GATGATGATGTGCAAGTTAGTGTGGAAAAGAATACAGCAAATGGTTTTTCTCCAAAGTCA
rJMSF003J10+          GATGATGATGTGCAAGTTAGTGTGGAAAAGAATACAGCAAATGGTTTTTCTCCAAAGTCA
                      ____________________________________________________________
consensus             GATGATGATGTGCAAGTTAGTGTGGAAAAGAATACAGCAAATGGTTTTTCTCCAAAGTCA
 
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rJMSF015K11+          ACTCCTAGCAAAAATAGTGGAAAAGCTACTGGTAAAACAATGCAATCGCCTCCAGGATTT
rJMSF003J10+          ACTCCTAGCAAAAATAGTGGAAAAGCTACTGGTAAAACAATGCAATCGCCTCCAGGATTT
                      ____________________________________________________________
consensus             ACTCCTAGCAAAAATAGTGGAAAAGCTACTGGTAAAACAATGCAATCGCCTCCAGGATTT
 
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rJMSF015K11+          ACATATGGAGAAGCTAACAAAGATGGGTCACCTGGGAGACAAAATTATGTCACAAGAAAT
rJMSF003J10+          ACATATGGAGAAGCTAACAAAGATGGGTCACCTGGGAGACAAAATTATGTCACAAGAAAT
rJMFF008F08+               TGGAGAAGCTAACAAAGATGGGTCACCTGGGAGACAAAATTATGTCACAAGAAAT
                      ____________________________________________________________
consensus             ACATATGGAGAAGCTAACAAAGATGGGTCACCTGGGAGACAAAATTATGTCACAAGAAAT
 
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rJMSF015K11+          TCAGAATTCAAGCGAGATATTGGTAATGTGAGCGGAGGTTCGCATTCGTCAGTTTCCTTA
rJMSF003J10+          TCAGAATTCAAGCGAGATATTGGTAATGTGAGCGGAGGTTCGCATTCGTCAGTTTCCTTA
rJMFF008F08+          TCAGAATTCAAGCGAGATATTGGTAATGTGAGCGGAGGTTCGCATTCGTCAGTTTCCTTA
                      ____________________________________________________________
consensus             TCAGAATTCAAGCGAGATATTGGTAATGTGAGCGGAGGTTCGCATTCGTCAGTTTCCTTA
 
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rJMSF015K11+          TTGGAGTCCATAAATCAGTTGAAAAAGGAGAACTGTGAACTAAAAGAAAGACTGAAAAGG
rJMSF003J10+          TTGGAGTCCATAAATCAGTTGAAAAAGGAGAACTGTGAACTAAAAGAAAGACTGAAAAGG
rJMFF008F08+          TTGGAGTCCATAAATCAGTTGAAAAAGGAGAACTGTGAACTAAAAGAAAGACTGAAAAGG
                      ____________________________________________________________
consensus             TTGGAGTCCATAAATCAGTTGAAAAAGGAGAACTGTGAACTAAAAGAAAGACTGAAAAGG
 
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rJMSF015K11+          AAAGAGGAAGATATTTTAGGTGATTTGCTGAATGATTTACAGAATGAAAGAGAGAGATGT
rJMSF003J10+          AAAGAGGAAGATATTTTAGGTGATTTGCTGAATGATTTACAGAATGAAAGAGAGAGATGT
rJMFF008F08+          AAAGAGGAAGATATTTTAGGTGATTTGCTGAATGATTTACAGAATGAAAGAGAGAGATGT
                      ____________________________________________________________
consensus             AAAGAGGAAGATATTTTAGGTGATTTGCTGAATGATTTACAGAATGAAAGAGAGAGATGT
 
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rJMSF015K11+          GAATCACTTGAAGCTCAGGTGGAGGAGTTGAAACAAAAAATTGAGGAACTGAACAAGGAT
rJMSF003J10+          GAATCACTTGAAGCTCAGGTGGAGGAGTTGAAACAAAAAATTGAGGAACTGAACAAGGAT
rJMFF008F08+          GAATCACTTGAAGCTCAGGTGGAGGAGTTGAAACAAAAAATTGAGGAACTGAACAAGGAT
                      ____________________________________________________________
consensus             GAATCACTTGAAGCTCAGGTGGAGGAGTTGAAACAAAAAATTGAGGAACTGAACAAGGAT
 
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rJMSF015K11+          CAAGAAAGGTTGATAGACATTTTTTCTGAGGAGCGGCAACGACGTGACACGGAAGAGGAA
rJMSF003J10+          CAAGAAAGGTTGATAGACATTTTTTCTGAGGAGCGGCAACGACGTGACACGGAAGAGGAA
rJMFF008F08+          CAAGAAAGGTTGATAGACATTTTTTCTGAGGAGCGGCAACGACGTGACACGGAAGAGGAA
                      ____________________________________________________________
consensus             CAAGAAAGGTTGATAGACATTTTTTCTGAGGAGCGGCAACGACGTGACACGGAAGAGGAA
 
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rJMSF015K11+          AATCTGAGAAAGAAGTTGAAGGATGCCTCAAATACTATCCAAGAGCTCCTTGATAAGATA
rJMSF003J10+          AATCTGAGAAAGAAGTTGAAGGATGCCTCAAATACTATCCAAGAGCTCCTTGATAAGATA
rJMFF008F08+          AATCTGAGAAAGAAGTTGAAGGATGCCTCAAATACTATCCAAGAGCTCCTTGATAAGATA
                      ____________________________________________________________
consensus             AATCTGAGAAAGAAGTTGAAGGATGCCTCAAATACTATCCAAGAGCTCCTTGATAAGATA
 
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rJMSF015K11+          ATGATGTTAGAAAGAAAGTCAAAAGTCTAGTAATGGGAAGTTGGGTGTAGCTGAAATCTA
rJMSF003J10+          ATGATGTTAGAAAGAAAGTCAAAAGTCTAGTAATGGGAAGTTGGGTGTAGCTGAAATCTA
rJMFF008F08+          ATGATGTTAGAAAGAAAGTCAAAAGTCTAGTAATGGGAAGTTGGGTGTAGCTGAAATCTA
                      ____________________________________________________________
consensus             ATGATGTTAGAAAGAAAGTCAAAAGTCTAGTAATGGGAAGTTGGGTGTAGCTGAAATCTA
 
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rJMSF015K11+          GTTTATATTTGATTTGATGTGTTAGCTAGCTAGCCTCAATCGTCATCCCAT         
rJMSF003J10+          GTTTATATTTGATTTGATGTGTTAGCTAGCTAGCCTCAATCGTCATCCCATCTGTGTTGT
rJMFF008F08+          GTTTATATTTGATTTGATGTGTTAGCTAGCTAGCCTCAATCGTCATCCCATCTGTGTTGT
                      ____________________________________________________________
consensus             GTTTATATTTGATTTGATGTGTTAGCTAGCTAGCCTCAATCGTCATCCCATCTGTGTTGT
 
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rJMSF003J10+          ATATGCACGCACTAATGCACCAATGCAGTAGGGATAGGGTGCAAATTACT          
rJMFF008F08+          ATATGCACGCACTAATGCACCAATGCAGTAGGGATAGGGTGCAAATTACTTTTTATATAT
                      ____________________________________________________________
consensus             ATATGCACGCACTAATGCACCAATGCAGTAGGGATAGGGTGCAAATTACTTTTTATATAT
 
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rJMFF008F08+          ATTTTGTGTTGGTATAATAGTAGTGCTTCACATTTGATTGACCCAACCCTATCCTTACCC
                      ____________________________________________________________
consensus             ATTTTGTGTTGGTATAATAGTAGTGCTTCACATTTGATTGACCCAACCCTATCCTTACCC