Contig 010985:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008D19Sequence397001697 (5)gb|AFQ23178.1|1e-37HSPRO [Nicotiana attenuata]642010985 (4)ref|XP_009613712.1|2e-80PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tomentosiformis]
JMFF021K09Sequence427001697 (5)gb|AFQ23178.1|5e-46HSPRO [Nicotiana attenuata]661010985 (4)ref|XP_009613712.1|1e-100PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tomentosiformis]
JMFF024B22Sequence490001697 (5)gb|AFQ23178.1|2e-85HSPRO [Nicotiana attenuata]797010985 (4)ref|XP_009613712.1|1e-89PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tomentosiformis]
JMFF027F18Sequence493001697 (5)gb|AFQ23178.1|5e-58HSPRO [Nicotiana attenuata]734010985 (4)ref|XP_009613712.1|7e-117PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF027F18+                                         GGATCTACGCATCAAAGTCGCTTCTAAAT
rJMFF024B22+                 CCACGCTGCAGGTACTGGAAACGTGGATCTACGCATCAAAGTCGCTTCTAAAT
                      ____________________________________________________________
consensus                    CCACGCTGCAGGTACTGGAAACGTGGATCTACGCATCAAAGTCGCTTCTAAAT
 
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rJMFF021K09+                                                 GCCGNAAGCGATNGTTGGATT
rJMFF027F18+          CGGATCTCAGAGAGGATTGATCGAAAGGAATTCGAAAAAGCCGGAAGCGATTGTTGGATT
rJMFF024B22+          CGGATCTCAGAGAGGATTGATCGAAAGGAATTCGAAAAAGCCGGAAGCGATTGTTGGATT
                      ____________________________________________________________
consensus             CGGATCTCAGAGAGGATTGATCGAAAGGAATTCGAAAAAGCCGGAAGCGATTGTTGGATT
 
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rJMFF021K09+          CTAGAGAAGACGTGGAAACTCTTAACCGAAATACAAGACCTCCACNTG-CTAATGGATCC
rJMFF027F18+          CTAGAGAAGACGTGGAAACTCTTAACCGAAATACAAGACCTCCACCTG-CTAATGGATCC
rJMFF024B22+          CTAGAGAAGACGTGGAAACTCTTAACCGAAATACAAGACCTCCACCTGNCTAATGGATCC
                      ____________________________________________________________
consensus             CTAGAGAAGACGTGGAAACTCTTAACCGAAATACAAGACCTCCACCTG-CTAATGGATCC
 
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rJMFF021K09+          CGACGATTTCCTCCGTCT-AAAAAATCAGTTATCCGTGAAAGCCGTCGCCGAATCGGAGC
rJMFF027F18+          CGACGATTTCCTCCGTCT-AAAAAATCAGTTATCCGTGAAAGCCGTCGCCGAATCGGAGC
rJMFF024B22+          CGACGATTTCCTCCGTCTAAAAAAATCAGTTATCCGTGAAAGCCGTCGCCGAATCGGAGC
rJMFF008D19+                             AAAAAATCAGTTATCCGTGAAAGCCGTCGCCGAATCGGAGC
                      ____________________________________________________________
consensus             CGACGATTTCCTCCGTCT-AAAAAATCAGTTATCCGTGAAAGCCGTCGCCGAATCGGAGC
 
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rJMFF021K09+          TCTTCTGCTTCCGATCCAGAGAACTGGNGGAGATCACGAAGCTCTCGAAGAGCCTGCGGC
rJMFF027F18+          TCTTCTGCTTCCGATCCAGAGAACTGGTGGAGATCACGAAGCTCTCGAAGAGCCTGCGGC
rJMFF024B22+          TCTTCTGCTTCCGATCCAGAGAACTGGTGGAGATCACGAAGCTCTCGAAGAGCCTGCGGC
rJMFF008D19+          TCTTCTGCTTCCGATCCAGAGAACTGGTGGAGATCACGAAGCTCTCGAAGAGCCTGCGGC
                      ____________________________________________________________
consensus             TCTTCTGCTTCCGATCCAGAGAACTGGTGGAGATCACGAAGCTCTCGAAGAGCCTGCGGC
 
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rJMFF021K09+          ACAAAGTCCCCTGTATTCTCGACGTAGAAGTCGATCCTCACGGCGGACCGAGGATCCAGG
rJMFF027F18+          ACAAAGTCCCCTGTATTCTCGACGTAGAAGTCGATCCTCACGGCGGACCGAGGATCCAGG
rJMFF024B22+          ACAAAGTCCCCTGTATTCTCGACGTAGAAGTCGATCCTCACGGCGGACCGAGGATCCAGG
rJMFF008D19+          ACAAAGTCCCCTGTATTCTCGACGTAGAAGTCGATCCTCACGGCGGACCGAGGATCCAGG
                      ____________________________________________________________
consensus             ACAAAGTCCCCTGTATTCTCGACGTAGAAGTCGATCCTCACGGCGGACCGAGGATCCAGG
 
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rJMFF021K09+          AGGCGGCGATGGAGCTATACCGGAGGAAAGAAGACTCGGAGAAGATTCATCTGCTTCAAG
rJMFF027F18+          AGGCGGCGATGGAGCTATACCGGAGGAAAGAAGACTCGGAGAAGATTCATCTGCTTCAAG
rJMFF024B22+          AGGCGGCGATGGAGCTATACCGGAGGAAAGAAGACTCGGAGAAGATTCATCTGCTTCAAG
rJMFF008D19+          AGGCGGCGATGGAGCTATACCGGAGGAAAGAAGACTCGGAGAAGATTCATCTGCTTCAAG
                      ____________________________________________________________
consensus             AGGCGGCGATGGAGCTATACCGGAGGAAAGAAGACTCGGAGAAGATTCATCTGCTTCAAG
 
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rJMFF021K09+          CTCTTCAAGCCATCGAAATGGCGGTGAAACGGTTTTACTACTCTTACAGGCAGCTTTTGG
rJMFF027F18+          CTCTTCAAGCCATCGAAATGGCGGTGAAACGGTTTTACTACTCTTACAGGCAGCTTTTGG
rJMFF024B22+          CTCTTCAAGCCATCGAAATGGCGGTGAAACGGTTTTACTACTCTTACAGGCAGCTTTTGG
rJMFF008D19+          CTCTTCAAGCCATCGAAATGGCGGTGAAACGGTTTTACTACTCTTACAGGCAGCTTTTGG
                      ____________________________________________________________
consensus             CTCTTCAAGCCATCGAAATGGCGGTGAAACGGTTTTACTACTCTTACAGGCAGCTTTTGG
 
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rJMFF021K09+          TGATCGTTATGGGGAGCTTAGAAGCTAAGGCGAATCCGGCGTTGGTGAACGCCGATTCCG
rJMFF027F18+          TGATCGTTATGGGGAGCTTAGAAGCTAAGGCGAATCCGGCGTTGGTGAACGCCGATTCCG
rJMFF024B22+          TGATCGTTATGGGGAGCTTAGAAGCTAAGGCGAATCCGGCGTTGGTGAACGCCGATTCCG
rJMFF008D19+          TGATCGTTATGGGGAGCTTAGAAGCTAAGGCGAATCCGGCGTTGGTGAACGCCGATTCCG
                      ____________________________________________________________
consensus             TGATCGTTATGGGGAGCTTAGAAGCTAAGGCGAATCCGGCGTTGGTGAACGCCGATTCCG
 
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rJMFF021K09+          GCGACTTGCTAGCTCAAATATTTCTGGAGCCGACTTATTTTCCGAGCTTGGATGCAGNGA
rJMFF027F18+          GCGACTTGCTAGCTCAAATATTTCTGGAGCCGACTTATTTTCCGAGCTTGGATGCAGCGA
rJMFF024B22+          GCGACTTGCTAGCTCAAATATTTCTGGAGCCGACTTATTTTCCGAGCTTGGATGCAGCGA
rJMFF008D19+          GCGACTTGCTAGCTCAAATATTTCTGGAGCCGACTTATTTTCCGAGCTTGGATGCAGCGA
                      ____________________________________________________________
consensus             GCGACTTGCTAGCTCAAATATTTCTGGAGCCGACTTATTTTCCGAGCTTGGATGCAGCGA
 
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rJMFF021K09+          AGACGTTTCTGGGGGAGCAGTGGAGTCGCGATCATGGCAGGTCTAGTCCGGAAAGAAGAG
rJMFF027F18+          AGACGTTTCTGGGGGAGCAGTGGAGTCGCGATCATGGCAGGTCTAGTCCGGAAAGAAGAG
rJMFF024B22+          AGACGTTTCTGGGGGAGCAGTGGAGTCGCGATCATGGCAGGTCTAGTCCGGAAAGAAGAG
rJMFF008D19+          AGACGTTTCTGGGGGAGCAGTGGAGTCGCGATCATGGCAGGTCTAGTCCGGAAAGAAGAG
                      ____________________________________________________________
consensus             AGACGTTTCTGGGGGAGCAGTGGAGTCGCGATCATGGCAGGTCTAGTCCGGAAAGAAGAG
 
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rJMFF021K09+          GCAAAAATGAGAAATGAGTTGACTCGATTGGCATTCAACTCAGTGACGTNGTAGTCATTT
rJMFF027F18+          GCAAAAATGAGAAATGAGTTGACTCGATTGGCATTCAACTCAGTGACGTTGTAGTCATTT
rJMFF024B22+          GCAAAAATGAGAAATGAGTTGACTCGATTGGCATTCAACTCAGTGACGTTGTAGTCATTT
rJMFF008D19+          GCAAAAATGAGAAATGAGTTGACTCGATTGGCATTCAACTCAGTGACGTTGTAGTCATTT
                      ____________________________________________________________
consensus             GCAAAAATGAGAAATGAGTTGACTCGATTGGCATTCAACTCAGTGACGTTGTAGTCATTT
 
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rJMFF021K09+          GACAGCGAAGCATTATCCAAGTTTTTGCCTAAAATATATTTC                  
rJMFF027F18+          GACAGCGAAGCATTATCCAAGTTTTTGCCTAAAATATATTTC                  
rJMFF024B22+          GACAGCGAAGCATTATCCAAGTTTTTGCCTAAAATATATTTCATTATTATTATTTTTGGT
rJMFF008D19+          GACAGCGAAGCATTATCCAAGTTTTTGCCTAAAATATATTTCATTATTATTATTTTTGGT
                      ____________________________________________________________
consensus             GACAGCGAAGCATTATCCAAGTTTTTGCCTAAAATATATTTCATTATTATTATTTTTGGT
 
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rJMFF024B22+          ATATATATCTGTAGCATACATGAT                                    
rJMFF008D19+          ATATATATCTGTAGCATACATGATGTTGTATAATACCACTTTTCAAAATTTTGCTGTGCT
                      ____________________________________________________________
consensus             ATATATATCTGTAGCATACATGATGTTGTATAATACCACTTTTCAAAATTTTGCTGTGCT