Contig 010984:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+                                                               GGGGAAG
                      ____________________________________________________________
consensus                                                                  GGGGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          CCTGTCAGTTATCCTGGACGAGACGGATGAAAATTGTTATTGGCATTGCTAAGGGGTTAA
                      ____________________________________________________________
consensus             CCTGTCAGTTATCCTGGACGAGACGGATGAAAATTGTTATTGGCATTGCTAAGGGGTTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          AATATCTCCACACAGAACTTCACCCTCCCCTTCACCATATCCGAACTAAATTCAAACGCG
rJMFF008B13+                                              ATATCCGAACTAAATTCAAACGCG
                      ____________________________________________________________
consensus             AATATCTCCACACAGAACTTCACCCTCCCCTTCACCATATCCGAACTAAATTCAAACGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          GTGTATCTCACAGAAGATTTTTCTCCCAAGCTGGTTGATTTTGAAAGCTGGAAGACGATC
rJMFF008B13+          GTGTATCTCACAGAAGATTTTTCTCCCAAGCTGGTTGATTTTGAAAGCTGGAAGACGATC
                      ____________________________________________________________
consensus             GTGTATCTCACAGAAGATTTTTCTCCCAAGCTGGTTGATTTTGAAAGCTGGAAGACGATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          ATTTCAAGATCAGAAAAGAACTCCGGTGCTATAAGCAGTGAAGGCGCCATTTGCATCCTT
rJMFF008B13+          ATTTCAAGATCAGAAAAGAACTCCGGTGCTATAAGCAGTGAAGGCGCCATTTGCATCCTT
                      ____________________________________________________________
consensus             ATTTCAAGATCAGAAAAGAACTCCGGTGCTATAAGCAGTGAAGGCGCCATTTGCATCCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          CCAAATTCACTCGA-GGGCGCTACATCGATGTCCAGGGTAACATCTACGCATTTGGAGTG
rJMFF008B13+          CCAAATTCACTCGAGGGGCGCTACATCGATGTCCAGGGTAACATCTACGCATTTGGAGTG
                      ____________________________________________________________
consensus             CCAAATTCACTCGAGGGGCGCTACATCGATGTCCAGGGTAACATCTACGCATTTGGAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          CTGCTGCTGGAAATCATCAGTGGCAGACCTCCATACTGCAAAGACAAAGGATCCTTAGTA
rJMFF008B13+          CTGCTGCTGGAAATCATCAGTGGCAGACCTCCATACTGCAAAGACAAAGGATCCTTAGTA
                      ____________________________________________________________
consensus             CTGCTGCTGGAAATCATCAGTGGCAGACCTCCATACTGCAAAGACAAAGGATCCTTAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          GACTGGGCTGAGCAATACCTCGAGGTTCCCGAGGTAATGTCGTACTTGGTGGATCCTGAG
rJMFF008B13+          GACTGGGCTGAGCAATACCTCGAGGTTCCCGAGGTAATGTCGTACTTGGTGGATCCTGAG
                      ____________________________________________________________
consensus             GACTGGGCTGAGCAATACCTCGAGGTTCCCGAGGTAATGTCGTACTTGGTGGATCCTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          CTGAAGCATTTCAGATATGAAGACCTTAAGGTGGTGTGTGGGGTGATCAACAAATGCATC
rJMFF008B13+          CTGAAGCATTTCAGATATGAAGACCTTAAGGTGGTGTGTGGGGTGATCAACAAATGCATC
                      ____________________________________________________________
consensus             CTGAAGCATTTCAGATATGAAGACCTTAAGGTGGTGTGTGGGGTGATCAACAAATGCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          CACCCAGATTCCAATTGCAGAGCTTCCATGAAAGACTTGTGTGCTGTGCTGGAAAGCGAC
rJMFF008B13+          CACCCAGATTCCAATTGCAGAGCTTCCATGAAAGACTTGTGTGCTGTGCTGGAAAGCGAC
                      ____________________________________________________________
consensus             CACCCAGATTCCAATTGCAGAGCTTCCATGAAAGACTTGTGTGCTGTGCTGGAAAGCGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          ATCGACACATCCATATCTGCAGAGCTGAAGGCGGCGGCGTCTCTGGCGTGGGCCGAGCTC
rJMFF008B13+          ATCGACACATCCATATCTGCAGAGCTGAAGGCGGCGGCGTCTCTGGCGTGGGCCGAGCTC
                      ____________________________________________________________
consensus             ATCGACACATCCATATCTGCAGAGCTGAAGGCGGCGGCGTCTCTGGCGTGGGCCGAGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          GCGCTCTCGTCCTGACACTACTGCTTGCTGCTAACAACTGTAAATTTGGAATACATATAT
rJMFF008B13+          GCGCTCTCGTCCTGACACTACTGCTTGCTGCTAACAACTGTAAATTTGGAATACATATAT
                      ____________________________________________________________
consensus             GCGCTCTCGTCCTGACACTACTGCTTGCTGCTAACAACTGTAAATTTGGAATACATATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          AACATTTGTTGTCATCAAGTTGAGATTTTGTGTAAATTGTGTGATGTGTTAGAGCTAATC
rJMFF008B13+          AACATTTGTTGTCATCAAGTTGAGATTTTGTGTAAATTGTGTGATGTGTTAGAGCTAATC
                      ____________________________________________________________
consensus             AACATTTGTTGTCATCAAGTTGAGATTTTGTGTAAATTGTGTGATGTGTTAGAGCTAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024M12+          AATTCTTTGTACACTAC                                           
rJMFF008B13+          AATTCTTTGTACACTACTAGAACATCAGTGAGCATTAGATAGTCAAATAGGAAAGAGCTA
                      ____________________________________________________________
consensus             AATTCTTTGTACACTACTAGAACATCAGTGAGCATTAGATAGTCAAATAGGAAAGAGCTA