clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF007L06 | Sequence | 614 | 007811 (5) | ref|XP_011087148.1| | 1e-56 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1 [Sesamum | 637 | 010981 (6) | ref|XP_009603521.1| | 4e-61 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X3 [Nicotian |
JMFF027I14 | Sequence | 613 | 007811 (5) | ref|XP_011087148.1| | 6e-68 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1 [Sesamum | 705 | 010981 (6) | ref|XP_009603521.1| | 7e-60 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X3 [Nicotian |
JMSF006B04 | Sequence | 348 | 010981 (6) | ref|XP_009779226.1| | 4e-13 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X3 [Nicotian | |||||
JMSF007B02 | Sequence | 828 | 010981 (6) | ref|XP_009603521.1| | 7e-53 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X3 [Nicotian | |||||
JMSF013C23 | Sequence | 225 | 007811 (5) | ref|XP_009603520.1| | 2e-25 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X2 [Nicotian | 763 | 010981 (6) | ref|XP_009603521.1| | 2e-60 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X3 [Nicotian |
JMSF034A10 | Sequence | 668 | 007811 (5) | ref|XP_011087148.1| | 5e-70 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1 [Sesamum | 763 | 010981 (6) | ref|XP_009603521.1| | 2e-60 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X3 [Nicotian |
This contig is upended
. : . : . : . : . : . :
rJMSF007B02+ GT
____________________________________________________________
consensus GT
. : . : . : . : . : . :
rJMSF013C23+ GAAT
rJMSF034A10+ GAAT
rJMSF007B02+ TTTGNAGAGTNTCGGTTATAAATCAGTATGTGTTGAGGGCTACCTTTTGATCCCCGGAAT
____________________________________________________________
consensus TTTGNAGAGTNTCGGTTATAAATCAGTATGTGTTGAGGGCTACCTTTTGATCCCCGGAAT
. : . : . : . : . : . :
rJMSF013C23+ GGTATGCGAAAGAAATGCAGCTCTGCAGAAAATTTATTCTACCATATGTATTTTCCTAAT
rJMSF034A10+ GGTATGCGAAAGAAATGCAGCTCTGCAGAAAATTTATTCTACCATATGTATTTTCCTAAT
rJMSF007B02+ GGTATGCGAAAGAAATGCAGCTNTGCAGAAAANTTATTCTACCATATGTATTTTCCTAAT
____________________________________________________________
consensus GGTATGCGAAAGAAATGCAGCTCTGCAGAAAATTTATTCTACCATATGTATTTTCCTAAT
. : . : . : . : . : . :
rJMSF013C23+ TG-TTTTCAAAATTCTGGGCGAATACTATGGTTTCTATGCTTATGAAAATTTAATATACT
rJMSF034A10+ TG-TTTTCAAAATTCTGGGCGAATACTATGGTTTCTATGCTTATGAAAATTTAATATACT
rJMSF007B02+ NGTTTTTCAAANTTCTGGGCGAATANTATGGTTTCTATGCTTATGAAAATTTAATATACT
rJMFF027I14+ TTCAAAATTCTGGGCGAATACTATGGTTTCTATGCTTATGAAAATTTAATATACT
____________________________________________________________
consensus TG-TTTTCAAAATTCTGGGCGAATACTATGGTTTCTATGCTTATGAAAATTTAATATACT
. : . : . : . : . : . :
rJMSF013C23+ CATATGATTCTTAGTCTTGGTTTCCTTCCGGCTTCCCCAGGCATAGTTCCAAACATTAGA
rJMSF034A10+ CATATGATTCTTAGTCTTGGTTTCCTTCCGGCTTCCCCAGGCATAGTTCCAAACATTAGA
rJMSF007B02+ CATATGATTCTTAGTCTTGGTTTCCTTCCGGCTTCCCCAGGCATAGTTCCAAACATTAGA
rJMFF027I14+ CATATGATTCTTAGTCTTGGTTTCCTTCCGGCTTCCCCAGGCATAGTTCCAAACATTAGA
rJMFF007L06+ CCTTCCGGCTTCCCCAGGCATAGTTCCAAACATTAGA
____________________________________________________________
consensus CATATGATTCTTAGTCTTGGTTTCCTTCCGGCTTCCCCAGGCATAGTTCCAAACATTAGA
. : . : . : . : . : . :
rJMSF013C23+ GGTCGTGTCCTAAGTGATTCTACAGGAGACCTCACAGAGGTCGAGAAGGGTTTATACGTA
rJMSF034A10+ GGTCGTGTCCTAAGTGATTCTACAGGAGACCTCACAGAGGTCGAGAAGGGTTTATACGTA
rJMSF007B02+ GGTCGTGTCNTAAGTGATTCTACAGGAGACCTCACAGAGGTCGAGAAGGGTTTATACGTA
rJMFF027I14+ GGTCGTGTCNTAAGTGATTCTACAGGAGACCTCACAGAGGTCGAGAAGGGTTTATACGTA
rJMFF007L06+ GGTCGTGTCCTAAGTGATTCTACAGGAGACCTCACAGAGGTCGAGAAGGGTTTATACGTA
____________________________________________________________
consensus GGTCGTGTCCTAAGTGATTCTACAGGAGACCTCACAGAGGTCGAGAAGGGTTTATACGTA
. : . : . : . : . : . :
rJMSF013C23+ TGTGGTTGGTTGAAAAGAGGACCAACTGGAATCATCGCTACCAATCTTTACTGTGCTGAA
rJMSF034A10+ TGTGGTTGGTTGAAAAGAGGACCAACTGGAATCATCGCTACCAATCTTTACTGTGCTGAA
rJMSF007B02+ TGTGGTTGGTTGAAAGGAGGACCAACTGGAATCATCGCTACCAATCTTTNCTGTGCTGAA
rJMFF027I14+ TGTGGTTGGTTGAAAAGAGGACCAACTGGAATCATCGCTACCAATCTTTACTGTGCTGAA
rJMFF007L06+ TGTGGTTGGTTGAAAAGAGGACCAACTGGAATCATCGCTACCAATCTTTACTGTGCTGAA
____________________________________________________________
consensus TGTGGTTGGTTGAAAAGAGGACCAACTGGAATCATCGCTACCAATCTTTACTGTGCTGAA
. : . : . : . : . : . :
rJMSF013C23+ GAAACTGTTGCCAGCATTTCTGAAGATATCAAGAAAGGAATTCTACCATCCACATCTGAC
rJMSF034A10+ GAAACTGTTGCCAGCATTTCTGAAGATATCAAGAAAGGAATTCTACCATCCACATCTGAC
rJMSF007B02+ GAAACTGTTGCCAGCATTTCTGAAGATATCAAGAAAGGAATTCTACCATCCNCATCTGNC
rJMFF027I14+ GAAACTGTTGCCAGCATTTCTGAAGATATCAAGAAAGGAATTCTACCATCCACATCTGAC
rJMFF007L06+ GAAACTGTTGCCAGCATTTCTGAAGATATCAAGAAAGGAATTCTACCATCCACATCTGAC
____________________________________________________________
consensus GAAACTGTTGCCAGCATTTCTGAAGATATCAAGAAAGGAATTCTACCATCCACATCTGAC
. : . : . : . : . : . :
rJMSF013C23+ CCATCAAAGCCGGGGAGGGAGGGCCTCCTTCAACTACTGGACAGTAAGAACTCCACAGTC
rJMSF006B04+ TCCACAGTC
rJMSF034A10+ CCATCAAAGCCGGGGAGGGAGGGCCTCCTTCAACTACTGGACAGTAAGAACTCCACAGTC
rJMSF007B02+ CCATCAAAGCCGGGGAGGGAGGGCCTCCTTCAACTACTGGACAGTAAGAACTCCACAGTC
rJMFF027I14+ CCATCAAAGCCGGGGAGGGAGGGCCTCCTTCAACTACTGGACAGTAAGAACTCCACAGTC
rJMFF007L06+ CCATCAAAGCCGGGGAGGGAGGGCCTCCTTCAACTACTGGACAGTAAGAACTCCACAGTC
____________________________________________________________
consensus CCATCAAAGCCGGGGAGGGAGGGCCTCCTTCAACTACTGGACAGTAAGAACTCCACAGTC
. : . : . : . : . : . :
rJMSF013C23+ ATCCCATTCGAGGGCTGGCAGAAGATCGATGCTGAAGAGAAAAGGCGAGGGTGTTTGAAA
rJMSF006B04+ ATCCCATTCGAGGGCTGGCAGAAGATCGATGCTGAAGAGAAAAGGCGAGGGTGTTTGAAA
rJMSF034A10+ ATCCCATTCGAGGGCTGGCAGAAGATCGATGCTGAAGAGAAAAGGCGAGGGTGTTTGAAA
rJMSF007B02+ ATNCCATTCGAGGGNTGGCAGAAGATCGANGCTGAAGAGAAAAGGCGAGGGTGTTTGAAA
rJMFF027I14+ ATCCCATTCGAGGGCTGGCAGAAGATCGATGCTGAAGAGAAAAGGCGAGGGTGTTTGAAA
rJMFF007L06+ ATCCCATTCGAGGGCTGGCAGAAGATCGATGCTGAAGAGAAAAGGCGAGGGTGTTTGAAA
____________________________________________________________
consensus ATCCCATTCGAGGGCTGGCAGAAGATCGATGCTGAAGAGAAAAGGCGAGGGTGTTTGAAA
. : . : . : . : . : . :
rJMSF013C23+ AACAAACCCAGAGAAAAACTCACCAGTTGGCAGGAACTACTTGAAGTTGCCAGGAAATGA
rJMSF006B04+ AACAAACCCAGAGAAAAACTCACCAGTTGGCAGGAACTACTTGAAGTTGCCAGGAAATGA
rJMSF034A10+ AACAAACCCAGAGAAAAACTCACCAGTTGGCAGGAACTACTTGAAGTTGCCAGGAAATGA
rJMSF007B02+ ANCAAACCCAGAGAAAAACTCACCAGTTGGCAGGANCTACTTGAAGTTGCCAGGAAATGN
rJMFF027I14+ AACAAACCCAGAGAAAAACTCACCAGTTGGCAGGAACTACTTGAAGTTGCCAGGAAATGA
rJMFF007L06+ AACAAACCCAGAGAAAAACTCACCAGTTGGCAGGAACTACTTGAAGTTGCCAGGAAATGA
____________________________________________________________
consensus AACAAACCCAGAGAAAAACTCACCAGTTGGCAGGAACTACTTGAAGTTGCCAGGAAATGA
. : . : . : . : . : . :
rJMSF013C23+ GGATTCTCACAAATCAGAACATAATTCGGTTTTGACAGCAATGCCCCCCGCCCGATTCAA
rJMSF006B04+ GGATTCTCACAAATCAGAACATAATTCGGTTTTGACAGCAATNCCCCCCGCCCGATTCAA
rJMSF034A10+ GGATTCTCACAAATCAGAACATAATTCGGTTTTGACAGCAATGCCCCCCGCCCGATTCAA
rJMSF007B02+ GGATTCTCACAAATCAGAACATAATTCGGTTTTGACAGCAATGCCCCCCGCCCGATTCAA
rJMFF027I14+ GGATTCTCACAAATCAGAACATAATTCGGTTTTGACAGCAATGCCCCCCGCCCGATTCAA
rJMFF007L06+ GGATTCTCACAAATCAGAACATAATTCGGTTTTGACAGCAATGCCCCCCGCCCGATTCAA
____________________________________________________________
consensus GGATTCTCACAAATCAGAACATAATTCGGTTTTGACAGCAATGCCCCCCGCCCGATTCAA
. : . : . : . : . : . :
rJMSF013C23+ TCCTTTTCTGATTACGAATGACATTTCACTTCTGGGTTAGTATACATGACTTGAGCTGTA
rJMSF006B04+ TCCTTTTCTGATTACGAATGACATTTCACTTCTGGGTTAGTATACATGACTTGAGCTGTA
rJMSF034A10+ TCCTTTTCTGATTACGAATGACATTTCACTTCTGGGTTAGTATACATGACTTGAGCTGTA
rJMSF007B02+ TCCTTTTCTGATTACGAATGACATTTCACNTCTGGGTTAGTATACATGACNTGAGCNGTA
rJMFF027I14+ TCCTTTTCTGATTACGAATGACATTTCACTTCTGGGTTAGTATACATGACTTGAGCTGTA
rJMFF007L06+ TCCTTTTCTGATTACGAATGACATTTCACTTCTGGGTTAGTATACATGACTTGAGCTGTA
____________________________________________________________
consensus TCCTTTTCTGATTACGAATGACATTTCACTTCTGGGTTAGTATACATGACTTGAGCTGTA
. : . : . : . : . : . :
rJMSF013C23+ TTGCATTCTTGGAGTTTATACATTAGGCTAGAAATAATTATTTCTTGAATAATTGAAGCT
rJMSF006B04+ TTGCATTCTTGGAGTNTATACATTAGGCTAGAAATAATTATTTCTTGAATAATTGAAGCT
rJMSF034A10+ TTGCATTCTTGGAGTTTATACATTAGGCTAGAAATAATTATTTCTTGAATAATTGAAGCT
rJMSF007B02+ TNGCATTCTTGGAGTTTATACATTAGGCTAGAAATAATTATTTCTTGAATAATTGAAGCT
rJMFF027I14+ TTGCATTCTTGGAGTTTATACATTAGGCTAGAAATAATTATTTCTTGAATAATTGAAGCT
rJMFF007L06+ TTGCATTCTTGGAGTTTATACATTAGGCTAGAAATAATTATTTCTTGAATAATTGAAGCT
____________________________________________________________
consensus TTGCATTCTTGGAGTTTATACATTAGGCTAGAAATAATTATTTCTTGAATAATTGAAGCT
. : . : . : . : . : . :
rJMSF013C23+ CTTGTATGGTGCTAATGTTGTTATAGTCCCAGATGCTCT
rJMSF006B04+ CTTGTANGGTGCTAATGTTGTTATAGTCCCAGA
rJMSF034A10+ CTTGTATGGTGCTAATGTTGTTATAGTCCCAGATGCTCT
rJMSF007B02+ CTNGTATGGTGCTAATGTTGTTATAGTCCCAGATGCTCT
rJMFF027I14+ CTTGTATGGTGCTAATGTTGTTATAGTCCCAGATGCTCT
rJMFF007L06+ CTTGTATGGTGCTAATGTTGTTATAGTCCCAGATGCTCTTGAGAAACAAAATTCTTCTTA
____________________________________________________________
consensus CTTGTATGGTGCTAATGTTGTTATAGTCCCAGATGCTCTTGAGAAACAAAATTCTTCTTA