Contig 010980:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001M13Sequence486004436 (5)ref|XP_011073578.1|4e-15PREDICTED: probable inactive receptor kinase At4g23740 [Sesamum indicum]677010980 (5)gb|KDP25339.1|5e-81hypothetical protein JCGZ_20495 [Jatropha curcas]
JMFF003L15Sequence535004436 (5)ref|XP_011073578.1|9e-53PREDICTED: probable inactive receptor kinase At4g23740 [Sesamum indicum]695010980 (5)gb|KDP25339.1|1e-81hypothetical protein JCGZ_20495 [Jatropha curcas]
JMFF004I18Sequence662004436 (5)ref|XP_011073578.1|1e-49PREDICTED: probable inactive receptor kinase At4g23740 [Sesamum indicum]704010980 (5)gb|KDP25339.1|1e-88hypothetical protein JCGZ_20495 [Jatropha curcas]
JMFF007K21Sequence575004436 (5)ref|XP_006343895.1|2e-61PREDICTED: probable inactive receptor kinase At4g23740-like [Solanum tuberosum]699010980 (5)gb|KDP25339.1|1e-81hypothetical protein JCGZ_20495 [Jatropha curcas]
JMFF027F19Sequence402004436 (5)ref|XP_004245544.1|9e-18PREDICTED: probable inactive receptor kinase At4g23740 [Solanum lycopersicum]655010980 (5)gb|KDP25339.1|9e-73hypothetical protein JCGZ_20495 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF004I18+ CGGGA
                      ____________________________________________________________
consensus CGGGA
 
. : . : . : . : . : . :
rJMFF001M13+ TGAACTCAAAGCAATACGGGTGCGTATCCGATGTGG
rJMFF004I18+ ACATCAAGTCCTCGAACATCTTTCTGAACTCAAAGCAATACGGGTGCGTATCCGATGTGG
rJMFF003L15+ TGAACTCAAAGCAATACGGGTGCGTATCCGATGTGG
rJMFF007K21+ TGAACTCAAAGCAATACGGGTGCGTATCCGATGTGG
                      ____________________________________________________________
consensus ACATCAAGTCCTCGAACATCTTTCTGAACTCAAAGCAATACGGGTGCGTATCCGATGTGG
 
. : . : . : . : . : . :
rJMFF001M13+ GTCTGTCAGCAATAATGAGCTCGTTGGCTCCGCCAGTAGCTCGTGCTGCTGGGTACCGAG
rJMFF004I18+ GTCTGTCAGCAATAATGAGCTCGTTGGCTCCGCCAGTAGCTCGTGCTGCTGGGTACCGAG
rJMFF027F19+ TCTGTCAGCAATAATGAGCTCGTTGGCTCCGCCAGTAGCTCGTGCTGCTGGGTACCGAG
rJMFF003L15+ GTCTGTCAGCAATAATGAGCTCGTTGGCTCCGCCAGTAGCTCGTGCTGCTGGGTACCGAG
rJMFF007K21+ GTCTGTCAGCAATAATGAGCTCGTTGGCTCCGCCAGTAGCTCGTGCTGCTGGGTACCGAG
                      ____________________________________________________________
consensus GTCTGTCAGCAATAATGAGCTCGTTGGCTCCGCCAGTAGCTCGTGCTGCTGGGTACCGAG
 
. : . : . : . : . : . :
rJMFF001M13+ CCCCAGAAGTGGTGGACACGCGAAAAGCAGCACACCCTTCGGACGTCTACAGCTTTGGAG
rJMFF004I18+ CCCCAGAAGTGGTGGACACGCGAAAAGCAGCACACCCTTCGGACGTCTACAGCTTTGGAG
rJMFF027F19+ CCCCAGAAGTGGTGGACACGCGAAAAGCAGCACACCCTTCGGACGTCTACAGCTTTGGAG
rJMFF003L15+ CCCCAGAAGTGGTGGACACGCGAAAAGCAGCACACCCTTCGGACGTCTACAGCTTTGGAG
rJMFF007K21+ CCCCAGAAGTGGTGGACACGCGAAAAGCAGCACACCCTTCGGACGTCTACAGCTTTGGAG
                      ____________________________________________________________
consensus CCCCAGAAGTGGTGGACACGCGAAAAGCAGCACACCCTTCGGACGTCTACAGCTTTGGAG
 
. : . : . : . : . : . :
rJMFF001M13+ TGCTGTTGCTCGAGCTCCTGACCGGGAAATCCCCCGTCCACACCACGAGCGGGGACGAGA
rJMFF004I18+ TGCTGTTGCTCGAGCTCCTGACCGGGAAATCCCCCGTCCACACCACGAGCGGGGACGAGA
rJMFF027F19+ TGCTGTTGCTCGAGCTCCTGACCGGGAAATCCCCCGTCCACACCACGAGCGGGGACGAGA
rJMFF003L15+ TGCTGTTGCTCGAGCTCCTGACCGGGAAATCCCCCGTCCACACCACGAGCGGGGACGAGA
rJMFF007K21+ TGCTGTTGCTCGAGCTCCTGACCGGGAAATCCCCCGTCCACACCACGAGCGGGGACGAGA
                      ____________________________________________________________
consensus TGCTGTTGCTCGAGCTCCTGACCGGGAAATCCCCCGTCCACACCACGAGCGGGGACGAGA
 
. : . : . : . : . : . :
rJMFF001M13+ TCATCCACCTGGTGCGGTGGGTGCACTCGGTGGTCCGGGAGGAGTGGACTGCTGAAGTGT
rJMFF004I18+ TCATCCACCTGGTGCGGTGGGTGCACTCGGTGGTCCGGGAGGAGTGGACTGCTGAAGTGT
rJMFF027F19+ TCATCCACCTGGTGCGGTGGGTGCACTCGGTGGTCCGGGAGGAGTGGACTGCTGAAGTGT
rJMFF003L15+ TCATCCACCTGGTGCGGTGGGTGCACTCGGTGGTCCGGGAGGAGTGGACTGCTGAAGTGT
rJMFF007K21+ TCATCCACCTGGTGCGGTGGGTGCACTCGGTGGTCCGGGAGGAGTGGACTGCTGAAGTGT
                      ____________________________________________________________
consensus TCATCCACCTGGTGCGGTGGGTGCACTCGGTGGTCCGGGAGGAGTGGACTGCTGAAGTGT
 
. : . : . : . : . : . :
rJMFF001M13+ TTGATGTGAAGCTGCTGAAGATCCCAGACATAGAGGAAGAGATGGTGGAGATGTTGCAGA
rJMFF004I18+ TTGATGTGAAGCTGCTGAAGATCCCAGACATAGAGGAAGAGATGGTGGAGATGTTGCAGA
rJMFF027F19+ TTGATGTGAAGCTGCTGAAGATCCCAGACATAGAGGAAGAGATGGTGGAGATGTTGCAGA
rJMFF003L15+ TTGATGTGAAGCTGCTGAAGATCCCAGACATAGAGGAAGAGATGGTGGAGATGTTGCAGA
rJMFF007K21+ TTGATGTGAAGCTGCTGAAGATCCCAGACATAGAGGAAGAGATGGTGGAGATGTTGCAGA
                      ____________________________________________________________
consensus TTGATGTGAAGCTGCTGAAGATCCCAGACATAGAGGAAGAGATGGTGGAGATGTTGCAGA
 
. : . : . : . : . : . :
rJMFF001M13+ TTGCTCTGTCGTGTGTGGTCAGGATGCCGGATCAGAGACCCAAAATGCCAGAAGTTGTTA
rJMFF004I18+ TTGCTCTGTCGTGTGTGGTCAGGATGCCGGATCAGAGACCCAAAATGCCAGAAGTTGTTA
rJMFF027F19+ TTGCTCTGTCGTGTGTGGTCAGGATGCCGGATCAGAGACCCAAAATGCCAGAAGTTGTTA
rJMFF003L15+ TTGCTCTGTCGTGTGTGGTCAGGATGCCGGATCAGAGACCCAAAATGCCAGAAGTTGTTA
rJMFF007K21+ TTGCTCTGTCGTGTGTGGTCAGGATGCCGGATCAGAGACCCAAAATGCCAGAAGTTGTTA
                      ____________________________________________________________
consensus TTGCTCTGTCGTGTGTGGTCAGGATGCCGGATCAGAGACCCAAAATGCCAGAAGTTGTTA
 
. : . : . : . : . : . :
rJMFF001M13+ AAATGATCGAAGGCGTGAGGAGGAACGATCATTTGGAGAACCGGAGATCTTGTGAAAATG
rJMFF004I18+ AAATGATCGAAGGCGTGAGGAGGAACGATCATTTGGAGAACCGGAGATCTTGTGAAAATG
rJMFF027F19+ AAATGATCGAAGGCGTGAGGAGGAACGATCATTTGGAGAACCGGAGATCTTGTGAAAATG
rJMFF003L15+ AAATGATCGAAGGCGTGAGGAGGAACGATCATTTGGAGAACCGGAGATCTTGTGAAAATG
rJMFF007K21+ AAATGATCGAAGGCGTGAGGAGGAACGATCATTTGGAGAACCGGAGATCTTGTGAAAATG
                      ____________________________________________________________
consensus AAATGATCGAAGGCGTGAGGAGGAACGATCATTTGGAGAACCGGAGATCTTGTGAAAATG
 
. : . : . : . : . : . :
rJMFF001M13+ GCGCATCGAGGCTGTCACCATCCTCGATTGAGCAGGAATGCTCTTAGAATCTGCAGAATT
rJMFF004I18+ GCGCATCGAGGCTGTCACCATCCTCGATTGAGCAGGAATGCTCTTAGAATCTGCAGAATT
rJMFF027F19+ GCGCATCGAGGCTGTCACCATCCTCGATTGAGCAGGAATGCTCTTAGAATCTGCAGAATT
rJMFF003L15+ GCGCATCGAGGCTGTCACCATCCTCGATTGAGCAGGAATGCTCTTAGAATCTGCAGAATT
rJMFF007K21+ GCGCATCGAGGCTGTCACCATCCTCGATTGAGCAGGAATGCTCTTAGAATCTGCAGAATT
                      ____________________________________________________________
consensus GCGCATCGAGGCTGTCACCATCCTCGATTGAGCAGGAATGCTCTTAGAATCTGCAGAATT
 
. : . : . : . : . : . :
rJMFF001M13+ GAATGAAGAAGTTGAAGTGATTCATGTCCCACATTGTTGCCATCTAGCTTTAATTTTAAT
rJMFF004I18+ GAATGAAGAAGTTGAAGTGATTCATGTCCCACATTGTTGCCATCTAGCTTTAATTTTAAT
rJMFF027F19+ GAATGAAGAAGTTGAAGTGATTCATGTCCCACATTGTTGCCATCTAGCTTTAATTTTAAT
rJMFF003L15+ GAATGAAGAAGTTGAGGTGATTCATGTCCCACATTGTTGCCATCTAGCTTTAATTTTAAT
rJMFF007K21+ GAATGAAGAAGTTGAGGTGATTCATGTCCCACATTGTTGCCATCTAGCTTTAATTTTAAT
                      ____________________________________________________________
consensus GAATGAAGAAGTTGAAGTGATTCATGTCCCACATTGTTGCCATCTAGCTTTAATTTTAAT
 
. : . : . : . : . : . :
rJMFF001M13+ CTGATTCCAGCGGTGTTTAAATGTATATTCACTATCTCAGTGGAGTCCGGGGATTCTTCT
rJMFF004I18+ CTGATTCCAGCGGTGTTTAAATGTATATTCACTATCTCAGTGGAGTCCGGGGATTCTTCT
rJMFF027F19+ CTGATTCCAGCGGTGTTTAAATGTATATTCACTATCTCAGTGGAGTCCGGGGATTCTTCT
rJMFF003L15+ CTGATTCCAGCGGTGTTTAAATGTATATTCACTATCTCAGTGGAGTCCGGGGATTCTTCT
rJMFF007K21+ CTGATTCCAGCGGTGTTTAAATGTATATTCACTATCTCAGTGGAGTCCGGGGATTCTTCT
                      ____________________________________________________________
consensus CTGATTCCAGCGGTGTTTAAATGTATATTCACTATCTCAGTGGAGTCCGGGGATTCTTCT
 
. : . : . : . : . : . :
rJMFF001M13+ TTGTAATAATCTGATGATCACAGTACAGTAAT
rJMFF004I18+ TTGTAATAATCTGATGATCACAGTACAGTAAT
rJMFF027F19+ TTGTAATAATCTGATGATCACAGTACAGTAATTGCAGAGATGGACTTGTTAAGCTA
rJMFF003L15+ TTGTAATAATCTGATGATCACAGTACAGTAATTGCAGAGATGGACTTGTTAAGCTA
rJMFF007K21+ TTGTAATAATCTGATGATCACAGTACAGTAATTGCAGAGATGGACTTGTTAAGCTATGAT
                      ____________________________________________________________
consensus TTGTAATAATCTGATGATCACAGTACAGTAATTGCAGAGATGGACTTGTTAAGCTATGAT