Contig 010975:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006B17Sequence577010975 (27)gb|ABY19575.1|4e-107actin [Ipomoea batatas]768010975 (27)gb|ACJ05348.1|1e-130actin [Camellia sinensis]
JMFF006F14Sequence486010975 (27)tpg|DAA51874.1|1e-81TPA: putative actin family protein isoform 1 [Zea mays] tpg|DAA51875.1| TPA: put753010975 (27)gb|KJB40446.1|6e-69hypothetical protein B456_007G063700 [Gossypium raimondii]
JMFF007M16Sequence646010975 (27)gb|ABY19575.1|1e-125actin [Ipomoea batatas]783010975 (27)gb|ACJ05348.1|6e-113actin [Camellia sinensis]
JMFF014A06Sequence536010975 (27)gb|AFW82900.1|1e-98putative actin family protein [Zea mays]826010975 (27)gb|ACJ05348.1|2e-113actin [Camellia sinensis]
JMFF015G01Sequence661010975 (27)gb|ABY19575.1|1e-128actin [Ipomoea batatas]670010975 (27)gb|ACJ05348.1|8e-107actin [Camellia sinensis]
JMFF016D15Sequence536010975 (27)gb|AFW82900.1|3e-97putative actin family protein [Zea mays]757010975 (27)dbj|BAN13564.1|4e-97actin, partial [Chrysanthemum seticuspe f. boreale]
JMFF021B22Sequence160010975 (27)
JMFF029M03Sequence425010975 (27)ref|XP_010911102.1|1e-65PREDICTED: actin-7-like, partial [Elaeis guineensis]638010975 (27)gb|ADF28626.1|2e-104actin [Vicia sativa]
JMFF029P08Sequence478010975 (27)gb|AFW82900.1|3e-81putative actin family protein [Zea mays]776010975 (27)gb|AFY06656.1|6e-63actin 2, partial [Carica papaya]
JMFF035N23Sequence514010975 (27)gb|AFW82900.1|1e-92putative actin family protein [Zea mays]713010975 (27)gb|KJB40446.1|3e-68hypothetical protein B456_007G063700 [Gossypium raimondii]
JMFF043C14Sequence653010975 (27)gb|ABY19575.1|3e-127actin [Ipomoea batatas]
JMFF045F22Sequence647019566gb|ABY19575.1|6e-112actin [Ipomoea batatas]616010975 (27)gb|ADZ73581.1|5e-91actin 1 [Vaccaria hispanica]
JMFF051J04Sequence558010975 (27)gb|AFW82900.1|2e-101putative actin family protein [Zea mays]502010975 (27)gb|KJB40446.1|1e-56hypothetical protein B456_007G063700 [Gossypium raimondii]
JMFS169C04Sequence605010975 (27)gb|AEY77415.1|3e-144actin, partial [Cirsium setosum]
JMSF018L07Sequence560010975 (27)ref|XP_010911102.1|3e-102PREDICTED: actin-7-like, partial [Elaeis guineensis]758010975 (27)gb|ACJ05348.1|8e-131actin [Camellia sinensis]
JMSF019C21Sequence645010975 (27)gb|ACJ05350.1|6e-94actin [Camellia sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF006F14- ATTGATTCTCCTTT
JMSF018L07- GATTGATTCTCCTTT
JMFF051J04- GATTCTCCTTT
JMFF016D15- ATTGATTCTCCTTT
JMFF014A06- GATTCTCCTTT
JMFF035N23- GATTCTCCTTT
JMFF029P08- ATTGGTTCTCCTTT
JMFF029M03- ATTGATTCTCCTTT
JMFF006B17- ATTGATTCTCCTTT
JMFF043C14- ATTCTCCTTT
JMFF007M16- GATTCTCCTTT
JMFF015G01- ATTGGTTCTCCTTT
                      ____________________________________________________________
consensus GATTGATTCTCCTTT
 
. : . : . : . : . : . :
JMFF006F14- CTAACACTCCTCAGCAGCCAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
JMSF018L07- CTAACACTCCTCAGCAGCCAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
JMFF051J04- CTAACACTCCTCAGCAGCCAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
JMFF016D15- CTAACACTCCTCAGCAGCCAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
JMFF014A06- CTAACACTCCTCAGCAGCCAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
JMFF035N23- CTAACACTCCTCAGCAGCCAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
JMFF029P08- CTAACACTCCTCAGCAGCCAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
JMFF029M03- CTAACACTCCTCAGCAGCCAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
JMFF006B17- CTAACACTCCTCAGCAGCCAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
JMFF043C14- CTAACACTCCTCAGCAGCCAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
JMFF007M16- CTAACACTCCTCAGCAGCCAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
JMFF015G01- CTAACACTCCTCAGCAGCTAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
                      ____________________________________________________________
consensus CTAACACTCCTCAGCAGCCAGCCAGACAGAGAATCTAGAGAGAGCGAGGCGGCCGGCCAT
 
. : . : . : . : . : . :
JMFF006F14- CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCTCAGTGTTTAATAGAAAATGGCAGAT
JMSF018L07- CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCCCAGTGTTTAATAGAAAATGGCAGAT
JMFF051J04- CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCTCAGTGTTTAATAGAAAATGGCAGAT
JMFF016D15- CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCTCAGTGTTTAATAGAAAATGGCAGAT
JMFF014A06- CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCTCAGTGTTTAATAGAAAATGGCAGAT
JMFF035N23- CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCTCAGTGTTTAATAGAAAATGGCAGAT
JMFF029P08- CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCTCAGTGTTTAATAGAAAATGGCAGAT
JMFF029M03- CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCTCAGTGTTTAATACAAAATGGCANAT
JMFF006B17- CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCTCAGTGTTTAATAGAAAATGGCAGAT
JMFF043C14- CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCTCAGTGTTTAATAGAAAATGGCAGAT
JMFF007M16- CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCTCAGTGTTTAATAGAAAATGGCAGAT
JMFF015G01- CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCTCAGTGTTTAATAGAAAATGGCAGAT
                      ____________________________________________________________
consensus CGTCTCCGGACTCAAATCTCGTTTTCTCTCACTCTCAGTGTTTAATAGAAAATGGCAGAT
 
. : . : . : . : . : . :
JMFF006F14- GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
JMSF018L07- GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
JMFF051J04- GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
JMFF016D15- GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
JMFF014A06- GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
JMFF035N23- GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
JMFF029P08- GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
JMFF029M03- GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
JMFF006B17- GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
JMFF043C14- GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
JMFF007M16- GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
JMFF015G01- GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
                      ____________________________________________________________
consensus GCTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTT
 
. : . : . : . : . : . :
JMFF006F14- GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
JMSF018L07- GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
JMFF051J04- GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
JMFF016D15- GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
JMFF014A06- GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
JMFF035N23- GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
JMFF029P08- GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
JMFF029M03- GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
JMFF006B17- GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
JMFF043C14- GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
JMFF007M16- GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
JMFF015G01- GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
                      ____________________________________________________________
consensus GCTGGTGATGATGCTCCAAGAGCAGTGTTTCCCAGTATTGTGGGTCGCCCCCGACACACT
 
. : . : . : . : . : . :
JMFF006F14- GGTGTTATGGTTGGGATGGGACANAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAN
JMSF018L07- GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
JMFF051J04- GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
JMFF016D15- GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
JMFF014A06- GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
JMFF035N23- GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
JMFF029P08- GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
JMFF029M03- GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
JMFF006B17- GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
JMFF043C14- GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
JMFF007M16- GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
JMFF015G01- GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
rJMFF029M03+ GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
                      ____________________________________________________________
consensus GGTGTTATGGTTGGGATGGGACAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCTAAG
 
. : . : . : . : . : . :
JMFF006F14- AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
JMSF018L07- AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
JMFF051J04- AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
JMFF016D15- AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
JMFF014A06- AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
JMFF035N23- AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
JMFF029P08- AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
JMFF029M03- AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCNACTGGGATGAT
JMFF006B17- AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
JMFF043C14- AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
JMFF007M16- AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
JMFF015G01- AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
rJMFF029M03+ AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
                      ____________________________________________________________
consensus AGAGGTATCTTGACCTTGAAATACCCCATTGAGCATGGTATTGTTAGCAACTGGGATGAT
 
. : . : . : . : . : . :
JMFF006F14- ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
JMSF018L07- ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
JMFF051J04- ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
JMFF016D15- ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
JMFF014A06- ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
JMFF035N23- ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
JMFF029P08- ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
JMFF029M03- ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCT
JMFF006B17- ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
JMFF043C14- ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
JMFF007M16- ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
JMFF015G01- ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
rJMFF029M03+ ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
                      ____________________________________________________________
consensus ATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTTCGTGTTGCACCTGAGGAGCAC
 
. : . : . : . : . : . :
JMFF006F14- CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGCAAACAGAGAGAAGA
JMSF018L07- CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGCAAACAGAGAGAAGATGACACAA
JMFF051J04- CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGNCAACAGAGAGAAGATGACANCA
JMFF016D15- CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGCAAACAGAGAGAAGATGACACAA
JMFF014A06- CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGCAAACAGAGAGAAGATGACACAA
JMFF035N23- CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGCAAACAGAGAGAAGATGACACAA
JMFF029P08- CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGCAAACAG
JMFF006B17- CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGCAAACAGAGAGAAGATGACACAA
JMFF043C14- CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGCAAACAGAGAGAAGATGACACAA
JMFF007M16- CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGCAAACAGAGAGAAGATGACACAA
JMFF015G01- CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGCAAACAGAGAGAAGATGACACAA
rJMFF029M03+ CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGCAAACAGAGAGAAGATGACACAA
JMFS169C04- CAAAAGCAAACAGAGAGAAGATGACACAA
                      ____________________________________________________________
consensus CCTGTCCTTCTTACCGAGGCACCCCTCAACCCAAAAGCAAACAGAGAGAAGATGACACAA
 
. : . : . : . : . : . :
JMSF018L07- ATCATGTTTGAGACATTTAATGTTCCTGCAATGTATGTTGCCATTCAGGCTGTGCTATCC
JMFF051J04- ATCATGTTTGAGACATTTAATGTTCCTGCAATGTATGTTGCCATTCNAGCTGTGCTATCC
JMFF016D15- ATCATGTTTGAGACATTTAATGTTCCTGCAATGTATGTTGCC
JMFF014A06- ATCATGTTTGAGACATTTAATGTTCCTGCAATGTATGTTGCCATT
JMFF035N23- ATCATGTTTGAGACATTTAATGT
JMFF006B17- ATCATGTTTGAGACATTTAATGTTCCTGCAATGTATGTTGCCATTCAGGCTGTGCTATCC
JMFF043C14- ATCATGTTTGAGACATTTAATGTTCCTGCAATGTATGTTGCCATTCAGGCTGTGCTATCC
JMFF007M16- ATCATGTTTGAGACATTTAATGTTCCTGCAATGTATGTTGCCATTCAGGCTGTGCTATCC
JMFF015G01- ATCATGTTTGAGACATTTAATGTTCCTGCAATGTATGTTGCCATTCAGGCTGTGCTATCC
rJMFF029M03+ ATCATGTTTGAGACATTTAATGTTCCTGCAATGTATGTTGCCATTCAGGCTGTGCTATCC
JMFS169C04- ATCATGTTTGAGACATTTAATGTTCCTGCAATGTATGTTGCCATTCAGGCTGTGCTATCC
                      ____________________________________________________________
consensus ATCATGTTTGAGACATTTAATGTTCCTGCAATGTATGTTGCCATTCAGGCTGTGCTATCC
 
. : . : . : . : . : . :
JMSF018L07- TTGTA
JMFF051J04- TTGTATG
JMFF006B17- TTGTATGCCAGTGGACGTACAAC
JMFF043C14- TTGTATGCCAGTGGACGTACAACTGGTATTGTGCTGGATTCTGGTGATGGTGTGAGCCAT
JMFF007M16- TTGTATGCCAGTGGACGTACAACTGGTATTGTGCTGGATTCTGGTGATGGTGTGAGCCAT
JMFF015G01- TTGTATGCCAGTGGACGTACAACTGGTATTGTGCTGGATTCTGGTGATGGTGTGAGCCAT
rJMFF029M03+ TTGTATGCCAGTGGACGTACAACTGGTATTGTGCTGGATTCTGGTGATGGTGTGAGCCAT
JMFS169C04- TTGTATGCCAGTGGACGTACAACTGGTATTGTGCTGGATTCTGGTGATGGTGTGAGCCAT
                      ____________________________________________________________
consensus TTGTATGCCAGTGGACGTACAACTGGTATTGTGCTGGATTCTGGTGATGGTGTGAGCCAT
 
. : . : . : . : . : . :
JMFF043C14- ACTGTACCCATCTATGAAGGTTATGCCCTTCCTCATGCC
JMFF007M16- ACTGTACCCATCTATGAAGGGTATGCCCTTCCTCA
JMFF015G01- ACTGTACCCATCTATGAAGGTTATGCCCTTCCTCATGCCAT
rJMFF029M03+ ACTGTACCCATCTATGAAGGTTATGCCCTTCCTCATGCCATTCTTCGTTTGGACCTTGCT
JMFS169C04- ACTGTACCCATCTATGAAGGTTATGCCCTTCCTCATGCCATTCTTCGTTTGGACCTTGCT
                      ____________________________________________________________
consensus ACTGTACCCATCTATGAAGGTTATGCCCTTCCTCATGCCATTCTTCGTTTGGACCTTGCT
 
. : . : . : . : . : . :
rJMFF029M03+ GGCCGTGACCTCACCGATCAC
JMFS169C04- GGCCGTGACCTCACCGATCACCTTATGAAGATCCTAACTGAAAGAGGTTACATGTTCACT
rJMSF018L07+ AAGATCCTAACTGAAAGAGGTTACATGTTCACT
rJMFF006B17+ AAGATCNTAACTGAAAGAGGTTACATGTTCACT
rJMFF016D15+ AACTGAAAGAGGTTACATGTTCACT
                      ____________________________________________________________
consensus GGCCGTGACCTCACCGATCACCTTATGAAGATCCTAACTGAAAGAGGTTACATGTTCACT
 
. : . : . : . : . : . :
JMFS169C04- ACTACTGCTGAGCGGGAAATTGTCCGTGACATGAAGGAAAAGCTTGCATATGTGGCCCTT
rJMSF018L07+ ACTACTGCTGAGCGGGAAATTGTCCGTGACATGAAGGAAAAGCTTGCATATGTGGCCCTT
rJMFF006B17+ ACTACTGCTGAGCGGGAAATTGTCCGTGACATGAAGGAAAAGCTTGCATATGTGGCCCTT
rJMFF016D15+ ACTACTGCTGAGCGGGAAATTGTCCGTGACATGAAGGAAAAGCTTGCATATGTGGCCCTT
rJMFF007M16+ TGAAGGAAAAGCTTGCATATGTGGCCCTT
rJMFF014A06+ CATGAAGGAAAAGCTTGCATATGTGGCCCTT
                      ____________________________________________________________
consensus ACTACTGCTGAGCGGGAAATTGTCCGTGACATGAAGGAAAAGCTTGCATATGTGGCCCTT
 
. : . : . : . : . : . :
JMFS169C04- GACTATGAGCAAGAGCTTGAAACTGCAAAGAGCAGCTCCTCTGTTGAGAAGAACTATGAG
rJMSF018L07+ GACTATGAGCAAGAGCTTGAAACTGCAAAGAGCAGCTCCTCTGTTGAGAAGAACTATGAG
rJMFF006B17+ GACTATGAGCAAGAGCTTGAAACTGCAAAGAGCAGCTCCTCTGTTGAGAAGAACTATGAG
rJMFF016D15+ GACTATGAGCAAGAGCTTGAAACTGCAAAGAGCAGCTCCTCTGTTGAGAAGAACTATGAG
rJMFF015G01+ GACTATGAGCAAGAGCTTGAAACTGCAAAGAGCAGCTCCTCTGTTGAGAAGAACTATGAG
rJMSF019C21+ TATGAGCAAGAGCTTGAAACTGCAAAGAGCAGCTCCTCNGTTGAGAAGAACTATGAG
rJMFF007M16+ GACTATGAGCAAGAGCTTGAAACTGCAAAGAGCAGCTCCTCTGTTGAGAAGAACTATGAG
rJMFF014A06+ GACTATGAGCAAGAGCTTGAAACTGCAAAGAGCAGCTCCTCTGTTGAGAAGAACTATGAG
                      ____________________________________________________________
consensus GACTATGAGCAAGAGCTTGAAACTGCAAAGAGCAGCTCCTCTGTTGAGAAGAACTATGAG
 
. : . : . : . : . : . :
JMFS169C04- TTGCCCGATGGGCAGGTCATAACTATCGGAGCAGAGAGGTTCCGTTGCCCAGAAGTCCTC
rJMSF018L07+ TTGCCCGATGGGCAGGTCATAACTATCGGAGCAGAGAGGTTCCGTTGCCCAGAAGTCCTC
rJMFF006B17+ TTGCCCGATGGGCAGGTCATAACTATCGGAGCAGAGAGGTTCCGTTGCCCAGAAGTCCTC
rJMFF016D15+ TTGCCCGATGGGCAGGTCATAACTATCGGAGCAGAGAGGTTCCGTTGCCCAGAAGTCCTC
rJMFF015G01+ TTGCCCGATGGGCAGGTCATAACTATCGGAGCAGAGAGGTTCCGTTGCCCAGAAGTCCTC
rJMFF045F22+ GCCCGATGGGCAGGTCATAACTATCGGAGCAGAGAGGTTCCGTTGCCCAGAAGTCCTC
rJMSF019C21+ TTGCCCGATGGGCAGGTCNTAACTATNGGAGCAGAGAGGTTCCNTTGCCCAGAAGTCCTC
rJMFF007M16+ TTGCCCGATGGGCAGGTCATAACTATCGGAGCAGAGAGGTTCCGTTGCCCAGAAGTCCTC
rJMFF014A06+ TTGCCCGATGGGCAGGTCATAACTATCGGAGCAGAGAGGTTCCGTTGCCCAGAAGTCCTC
                      ____________________________________________________________
consensus TTGCCCGATGGGCAGGTCATAACTATCGGAGCAGAGAGGTTCCGTTGCCCAGAAGTCCTC
 
. : . : . : . : . : . :
JMFS169C04- TTCCAGCCATCTATGATTGGAATGGAAGCTGCTGGTATT-CACGAGACTACTTACAACT-
rJMSF018L07+ TTCCAGCCATCTATGATTGGAATGGAAGCTGCTGGTATT-CACGAGACTACTTACAACT-
rJMFF006B17+ TTCCAGCCATCTATGATTGGAATGGAAGCTGCTGGTATT-CACGAGACTACTTACAACT-
rJMFF016D15+ TTCCAGCCATCTATGATTGGAATGGAAGCTGCTGGTATT-CACGAGACTACTTACAACT-
rJMFF015G01+ TTCCAGCCATCTATGATTGGAATGGAAGCTGCTGGTATT-CACGAGACTACTTACAACT-
rJMFF045F22+ TTCCAGCCATCTATGATTGGAATGGAAGCTGCTGGTATT-CACGAGACTACTTACAACT-
rJMSF019C21+ TTCCANCCATCTATGATTGGAATGGAAGCTGCTGGTATT-CACGAGACTACTTACAACT-
rJMFF007M16+ TTCCAGCCATCTATGATTGGAATGGAAGCTGCTGGTATT-CACGAGACTACTTACAACT-
rJMFF014A06+ TTCCAGCCATCTATGATTGGAATGGAAGCTGCTGGTATT-CACGAGACTACTTACAACT-
rJMFF029P08+ CCAGCCATCTATGATTGGAATGGAAGCTGCTGGTATTCCACGAGACTACTTACAACTC
rJMFF035N23+ AAGCTGCTGGTATT-CACGAGACTACTTACAACT-
rJMFF006F14+ GGAAGCTGCTGGTATT-CACGAGACTACTTACAACT-
                      ____________________________________________________________
consensus TTCCAGCCATCTATGATTGGAATGGAAGCTGCTGGTATT-CACGAGACTACTTACAACT-
 
. : . : . : . : . : . :
JMFS169C04- CCATTATGAAGTGTGATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
rJMSF018L07+ CCATTATGAAGTGTGATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
rJMFF006B17+ CCATTATGAAGTGTGATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
rJMFF016D15+ CCATTATGAAGTGTGATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
rJMFF015G01+ CCATTATGAAGTGTGATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
rJMFF045F22+ CCATTATGAAGTGTGATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
rJMSF019C21+ CCATTATGAAGTGTGANGTAGATATCAGGAAGGATCTCTATGGTAATANTGTTCTCAGTG
rJMFF007M16+ CCATTATGAAGTGTGATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
rJMFF014A06+ CCATTATGAAGTGTGATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
rJMFF051J04+ GATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
rJMFF029P08+ CCATTATGAAGTGTGATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
rJMFF035N23+ CCATTATGAAGTGTGATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
rJMFF006F14+ CCATTATGAAGTGTGATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
                      ____________________________________________________________
consensus CCATTATGAAGTGTGATGTAGATATCAGGAAGGATCTCTATGGTAATATTGTTCTCAGTG
 
. : . : . : . : . : . :
JMFS169C04- GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATG
rJMSF018L07+ GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTAG
rJMFF006B17+ GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTAG
rJMFF016D15+ GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTAG
rJMFF015G01+ GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTAG
rJMFF045F22+ GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTAG
rJMSF019C21+ GTGGCTNTACAANGTTCCCTGGTATTNNTGATCGGATGAGCAAGGAAATCACTGCTTTAG
rJMFF007M16+ GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTAG
rJMFF014A06+ GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTAG
rJMFF051J04+ GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTAG
rJMFF029P08+ GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTAG
rJMFF035N23+ GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTAG
rJMFF006F14+ GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTAG
                      ____________________________________________________________
consensus GTGGCTCTACAATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTAG
 
. : . : . : . : . : . :
rJMSF018L07+ -CCCCCAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAAAGAAAATACAGTGTTTGG
rJMFF006B17+ -CCCCCAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAAAGAAAATACAGTGTTTGG
rJMFF016D15+ CCCCCCAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAAAGAAAATACAGTGTTTGG
rJMFF015G01+ -CCCCCAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAAAGAAAATACAGTGTTTGG
rJMFF045F22+ -CCCCCAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAAAGAAAATACAGTGTTTGG
rJMSF019C21+ -CCCCCAGCAGCNNGAAGATTAAGGTGGTTNCTCCACCAGAAAGAAAATACAGTGTTTGG
rJMFF007M16+ -CCCCCAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAAAGAAAATACAGTGTTTGG
rJMFF014A06+ -CCCCCAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAAAGAAAATACAGTGTTTGG
rJMFF051J04+ -CCCCCAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAAAGAAAATACAGTGTTTGG
rJMFF029P08+ -CCCCCAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAAAGAAAATACAGTGTTTGG
rJMFF035N23+ -CCCCCAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAAAGAAAATACAGTGTTTGG
rJMFF006F14+ -CCCCCAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAAAGAAAATACAGTGTTTGG
                      ____________________________________________________________
consensus -CCCCCAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAAAGAAAATACAGTGTTTGG
 
. : . : . : . : . : . :
rJMSF018L07+ ATTGGAGGATCCATCCTCGCATCCCTCAGCACTTTCCAGCAGATGTGGATTTCGAAAGGG
rJMFF006B17+ ATTGGAGGATCCATCCTCGCATCCCTCAGCACTTTCCAGCAGATGTGGATTTCGAAAGGG
rJMFF016D15+ ATTGGAGGATCCATCCTCGCATCCCTCAGCACTTTCCAGCAGATGTGGATTTCGAAAGGG
rJMFF015G01+ ATTGGAGGATCCATCCTCGCATCCCTCAGCACTTTCCAGCAGATGTGGATTTCGAAAGGG
rJMFF045F22+ ATTGGAGGATCCATCCTCGCATCCCTCAGCACTTTCCAGCAGATGTGGATTTCGAAAGGG
rJMSF019C21+ ATTGGAGGATCCATCCTCGCNTCCCTCAGCACTTTNCAGCAGANGTGGATTTCGAAAGGG
rJMFF007M16+ ATTGGAGGATCCATCCTCGCATCCCTCAGCACTTTCCAGCAGATGTGGATTTCGAAAGGG
rJMFF014A06+ ATTGGAGGATCCATCCTCGCATCCCTCAGCACTTTCCAGCAGATGTGGATTTCGAAAGGG
rJMFF051J04+ ATTGGAGGATCCATCCTCGCATCCCTCAGCACTTTCCAGCAGATGTGGATTTCGAAAGGG
rJMFF029P08+ ATTGGAGGATCCATCCTCGCATCCCTCAGCACTTTCCAGCAGATGTGGATTTCGAAAGGG
rJMFF035N23+ ATTGGAGGATCCATCCTCGCATCCCTCAGCACTTTCCAGCAGATGTGGATTTCGAAAGGG
rJMFF006F14+ ATTGGAGGATCCATCCTCGCATCCCTCAGCACTTTCCAGCAGATGTGGATTTCGAAAGGG
                      ____________________________________________________________
consensus ATTGGAGGATCCATCCTCGCATCCCTCAGCACTTTCCAGCAGATGTGGATTTCGAAAGGG
 
. : . : . : . : . : . :
rJMSF018L07+ GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
rJMFF006B17+ GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
rJMFF016D15+ GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
rJMFF015G01+ GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
rJMFF045F22+ GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
rJMSF019C21+ GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
rJMFF007M16+ GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
rJMFF014A06+ GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
rJMFF051J04+ GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
rJMFF029P08+ GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
rJMFF035N23+ GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
rJMFF006F14+ GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
                      ____________________________________________________________
consensus GAGTATGAGGAGTCTGGCCCATCAATTGTCCACAGGAAGTGCTTCTAAGATGCTACTACT
 
. : . : . : . : . : . :
rJMSF018L07+ ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTGCCTAGACGTGTCATTGCTGGTA-
rJMFF006B17+ ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTGCCTAGACGTGTCATTGCTGGTA-
rJMFF016D15+ ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTGCCTAGACGTGTCATTGCTGGTA-
rJMFF015G01+ ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTGCCTAGACGTGTCATTGCTGGTA-
rJMFF045F22+ ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTGCCTAGACGTGTCATTGCTGGTA-
rJMSF019C21+ ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTNCCTAGACGNGTCATTGCNGGTAC
rJMFF007M16+ ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTGCCTAGACGTGTCATTGCTGGTA-
rJMFF014A06+ ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTGCCTAGACGTGTCATTGCTGGTA-
rJMFF051J04+ ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTGCCTAGACGTGTCATTGCTGGTA-
rJMFF021B22+ TTCTGCCTAGACGTGTCATTGCTGGTA-
rJMFF029P08+ ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTGCCTAGACGTGTCATTGCTGGTA-
rJMFF035N23+ ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTGCCTAGACGTGTCATTGCTGGTA-
rJMFF006F14+ ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTGCCTAGACGTGTCATTGCTGGTA-
                      ____________________________________________________________
consensus ATTTTAAAGGGGTGGCCACTTGTGTTTGCCTCTTCTGCCTAGACGTGTCATTGCTGGTA-
 
. : . : . : . : . : . :
rJMSF018L07+ GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
rJMFF006B17+ GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
rJMFF016D15+ GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
rJMFF015G01+ GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
rJMFF045F22+ GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
rJMSF019C21+ GGTGTTNGTAGTTGGNGAGTGAGTGGTTGTGATGTTGTNTTCTTCAATTTTCTTCTTTCT
rJMFF007M16+ GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
rJMFF014A06+ GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
rJMFF051J04+ GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
rJMFF021B22+ GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
rJMFF029P08+ GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
rJMFF035N23+ GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
rJMFF006F14+ GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
                      ____________________________________________________________
consensus GGTGTTTGTAGTTGGAGAGTGAGTGGTTGTGATGTTGTTTTCTTCAATTTTCTTCTTTCT
 
. : . : . : . : . : . :
rJMSF018L07+ CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGAC
rJMFF006B17+ CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGACAAGGTTATGTTAATATT
rJMFF016D15+ CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGACAAGGTTATGTTAATATT
rJMFF015G01+ CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGACAAGGTTATGTTAATATT
rJMFF045F22+ CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGACAAGGTTATGTTAATATT
rJMSF019C21+ CTTCCCAATTTCTTATTATATGGGGCTCTNTTTATCAACGGACAAGGTTAT
rJMFF007M16+ CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGACAAGGTTATGTTAATATT
rJMFF014A06+ CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGACAAGGTTATGTTAATATT
rJMFF051J04+ CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGACAAGGTTATGTTAATATT
rJMFF021B22+ CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGACAAGGTTATGTTAATATT
rJMFF029P08+ CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGACAAGGTTATGTTAATATT
rJMFF035N23+ CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGACAAGGTTATGTTAATATT
rJMFF006F14+ CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGACAAGGTTATGTTAATATT
                      ____________________________________________________________
consensus CTTCCCAATTTCTTATTATATGGGGCTCTTTTTATCAACGGACAAGGTTATGTTAATATT
 
. : . : . : . : . : . :
rJMFF006B17+ TATTGTACCAGAAT
rJMFF016D15+ TATTGTACCAGAATT
rJMFF015G01+ TATTGTACCAGAAT
rJMFF045F22+ TATTGTACCAGAATTTTATG
rJMFF007M16+ TATTGTACCAGAATTTTATGGCAGTGATTGTTTTGGGGAATTATGAGCCTGGCCAGATTG
rJMFF014A06+ TATTGTACCAGAATTTTATAGCAGTGATTGTTTTGGGGAATTATGAGCCTGGCCAGATTG
rJMFF051J04+ TATTGTACCAGAATTTTATGGCAGTGATTGTTTTGGGG
rJMFF021B22+ TATTGTACCAGAA
rJMFF029P08+ TATTGTACCAGAATTTTATGGCAGTGATTGTTTTGGGGAATTATGAGCCTGGCCAGATTG
rJMFF035N23+ TATTGTACCAGAATTTTATGGCAGTGATTGTTTTGGGGAATTATGAGCCTGGCCAGATTG
rJMFF006F14+ TATTGTACCAGAATTTTATGGCAGTGATTGTTTTGGGGAATTATGAGCCTGGCCAGATTG
                      ____________________________________________________________
consensus TATTGTACCAGAATTTTATGGCAGTGATTGTTTTGGGGAATTATGAGCCTGGCCAGATTG
 
. : . : . : . : . : . :
rJMFF007M16+ AAAGGTTCCTAGGTTTTTTTTCGTGTGGATGTAGAAAT
rJMFF014A06+ AAAGGTTCCTAGGTTTTTTTTCGTGTGGATGTAGAAATTTTTTGGGGGCTTAGCGCACCC
rJMFF029P08+ AAAGGTTCCTAGGTTTTTTTTCGTGTGGATGTAGAAATTTTTTGGGGGCTTAGCGCACCC
rJMFF035N23+ AAAGGTTCCTAGGTTTTTTTTCGTGTGGATGTAGAAATTTTTTGGGGGCTTAGCGCACCC
rJMFF006F14+ AAAGGTTCCTAGGTTTTTTTTCGTGTGGATGTAGAAATTTTTTGGGGGCTTAGCGCACCC
                      ____________________________________________________________
consensus AAAGGTTCCTAGGTTTTTTTTCGTGTGGATGTAGAAATTTTTTGGGGGCTTAGCGCACCC
 
. : . : . : . : . : . :
rJMFF014A06+ ATCTAAATTTGTGGGAAAC
rJMFF029P08+ ATCTAAATTTGTGGGAAACTTTGTTTTGAGTGTATCCCTTGCATTTTGGTCCATTCCTGG
rJMFF035N23+ ATCTAAATTTGTGGGAAACTTTGTTTTGAGTGTATCCCTTGCATTTTGGTCCATTCCTGG
rJMFF006F14+ ATCTAAATTTGTGGGAAACTTTGTTTTGAGTGTATCCCTTGCATTTTGGTCCATTCCTGG
                      ____________________________________________________________
consensus ATCTAAATTTGTGGGAAACTTTGTTTTGAGTGTATCCCTTGCATTTTGGTCCATTCCTGG
 
. : . : . : . : . : . :
rJMFF029P08+ TT
rJMFF035N23+ TT
rJMFF006F14+ TTTGAATCAAGAGTAACAAACAGCCTTGTCCTGTATTGCTGCCATTTTCATATTCATAAA
                      ____________________________________________________________
consensus TTTGAATCAAGAGTAACAAACAGCCTTGTCCTGTATTGCTGCCATTTTCATATTCATAAA