Contig 010974:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005P22Sequence477007976 (4)ref|XP_009629754.1|1e-68PREDICTED: caffeoylshikimate esterase-like [Nicotiana tomentosiformis]773010974 (4)ref|XP_009629754.1|4e-117PREDICTED: caffeoylshikimate esterase-like [Nicotiana tomentosiformis]
JMSF001M24Sequence366010974 (4)ref|XP_009786213.1|2e-62PREDICTED: caffeoylshikimate esterase-like [Nicotiana sylvestris]611010974 (4)ref|XP_009786213.1|4e-85PREDICTED: caffeoylshikimate esterase-like [Nicotiana sylvestris]
JMSF035M08Sequence642007976 (4)ref|XP_009786213.1|8e-24PREDICTED: caffeoylshikimate esterase-like [Nicotiana sylvestris]682010974 (4)ref|XP_009786213.1|2e-104PREDICTED: caffeoylshikimate esterase-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF005P22+ GATGATGTCATTGAGCATTACTCAAAAGTTAAAGAAAAGCCAGAGTTGCGCGG
                      ____________________________________________________________
consensus GATGATGTCATTGAGCATTACTCAAAAGTTAAAGAAAAGCCAGAGTTGCGCGG
 
. : . : . : . : . : . :
rJMSF035M08+ CTTTGGGCAATCCATGGGCGGAGCAGTTGCTCTGAAGGTTCACCT
rJMFF005P22+ GCTGCCAAGCTTCCTCTTTGGGCAATCCATGGGCGGAGCAGTTGCTCTGAAGGTTCACCT
                      ____________________________________________________________
consensus GCTGCCAAGCTTCCTCTTTGGGCAATCCATGGGCGGAGCAGTTGCTCTGAAGGTTCACCT
 
. : . : . : . : . : . :
rJMSF035M08+ GAAGCAACCCGATGCATGGAATGGGGCGGTTCTGGTTGCACCTATGTGCAAAATTGCAGA
rJMSF001M24+ GGCGGTTCTGGTTGCACCTATGTGCAAAATTGCAGA
JMSF001M24- GGCGGTTCTGGTTGCACCTATGTGCAAAATTGCAGA
rJMFF005P22+ GAAGCAACCCGATGCATGGAATGGGGCGGTTCTGGTTGCACCTATGTGCAAAATTGCAGA
                      ____________________________________________________________
consensus GAAGCAACCCGATGCATGGAATGGGGCGGTTCTGGTTGCACCTATGTGCAAAATTGCAGA
 
. : . : . : . : . : . :
rJMSF035M08+ TGACATGGCTCCACCGTGGTTATTGACACAAATCCTTATCGTGGTGGCGAAATTTCTTCC
rJMSF001M24+ TGACATGGCTCCACCGTGGTTATTGACACAAATCCTTATCGTGGTGGCGAAATTTCTTCC
JMSF001M24- TGACATGGCTCCACCGTGGTTATTGACACAAATCCTTATCGTGGTGGCGAAATTTCTTCC
rJMFF005P22+ TGACATGGCTCCACCGTGGTTATTGACACAAATCCTTATCGTGGTGGCGAAATTTCTTCC
                      ____________________________________________________________
consensus TGACATGGCTCCACCGTGGTTATTGACACAAATCCTTATCGTGGTGGCGAAATTTCTTCC
 
. : . : . : . : . : . :
rJMSF035M08+ AAAACAGAAGCTAGTTCCGCAAAAGGATTTGGCTGAGTTAGCATTCAAAGACACAAAGAA
rJMSF001M24+ AAAACAGAAGCTAGTTCCGCAAAAGGATTTGGCTGAGTTAGCATTCAAAGACACAAAGAA
JMSF001M24- AAAACAGAAGCTAGTTCCGCAAAAGGATTTGGCTGAGTTAGCATTCAAAGACACAAAGAA
rJMFF005P22+ AAAACAGAAGCTAGTTCCGCAAAAGGATTTGGCTGAGTTAGCATTCAAAGACACAAAGAA
                      ____________________________________________________________
consensus AAAACAGAAGCTAGTTCCGCAAAAGGATTTGGCTGAGTTAGCATTCAAAGACACAAAGAA
 
. : . : . : . : . : . :
rJMSF035M08+ GAGAGAACAGACTAACTATAATGTCATTGGCTATAGACATAAACCGCGCTTAGGGACTGC
rJMSF001M24+ GAGAGAACAGACTAACTATAATGTCATTGGCTATAGACATAAACCGCGCTTAGGGACTGC
JMSF001M24- GAGAGAACAGACTAACTATAATGTCATTGGCTATAGACATAAACCGCGCTTAGGGACTGC
rJMFF005P22+ GAGAGAACAGACTAACTATAATGTCATTGGCTATAGACATAAACCGCGCTTAGGGACTGC
                      ____________________________________________________________
consensus GAGAGAACAGACTAACTATAATGTCATTGGCTATAGACATAAACCGCGCTTAGGGACTGC
 
. : . : . : . : . : . :
rJMSF035M08+ CCTGGAACTACTTAAGACTACTCAGGAGATAGAGCGATTGTTAGAAAAGGTGTCTCTGCC
rJMSF001M24+ CCTGGAACTACTTAAGACTACTCAGGAGATAGAGCGATTGTTAGAAAAGGTGTCTCTGCC
JMSF001M24- CCTGGAACTACTTAAGACTACTCAGGAGATAGAGCGATTGTTAGAAAAGGTGTCTCTGCC
rJMFF005P22+ CCTGGAACTACTTAAGACTACTCAGGAGATAGAGCGATTGTTAGAAAAGGTGTCTCTGCC
                      ____________________________________________________________
consensus CCTGGAACTACTTAAGACTACTCAGGAGATAGAGCGATTGTTAGAAAAGGTGTCTCTGCC
 
. : . : . : . : . : . :
rJMSF035M08+ ATTACTTATTCTGCATGGAAAGAATGATGTAGTGACTGATCCATCAGTAAGCAAAGCATT
rJMSF001M24+ ATTACTTATTCTGCATGGAAAGAATGATGTAGTGACTGATCCATCAGTAAGCAAAGCATT
JMSF001M24- ATTACTTATTCTGCATGGAAAGAATGATGTAGTGACTGATCCATCAGTAAGCAAAGCATT
rJMFF005P22+ ATTACTTATTCTGCATGGAAAGAATGATGTAGTGACTGATCCATCAGTAAGCAAAGCATT
                      ____________________________________________________________
consensus ATTACTTATTCTGCATGGAAAGAATGATGTAGTGACTGATCCATCAGTAAGCAAAGCATT
 
. : . : . : . : . : . :
rJMSF035M08+ GTATGAGAAGGCAAGCAGCCATGACAAGAAACTAAACCTTTATGATGAGGCTTGGCATGC
rJMSF001M24+ GTATGAGAAGGCAAGCAGCCATGACAAGAAACTAAACCTTTATGATGAGGCTTGGCATGC
JMSF001M24- GTATGAGAAGGCAAGCAGCCATGACAAGAA
rJMFF005P22+ GTATGAGAAGGCAAGCAGCCATGACAAGAAACTAAACCTTTATGATGAGGCTTGGCATGC
                      ____________________________________________________________
consensus GTATGAGAAGGCAAGCAGCCATGACAAGAAACTAAACCTTTATGATGAGGCTTGGCATGC
 
. : . : . : . : . : . :
rJMSF035M08+ CCTTTTGGAAGGTGAACCAGATGAGATGATTCACAGAGTTCTTGGTGACATCATTTCTTG
rJMSF001M24+ CCTTTTGGAAGGTGAACCAGATGAGATGATTCACAGAGTTCTTGGTGACATCATTTCTTG
rJMFF005P22+ CCTTTTGGAAGGTGAACCAGATGAGATGATTCACAGAGTTCTTGGTGACATCATTTCTTG
                      ____________________________________________________________
consensus CCTTTTGGAAGGTGAACCAGATGAGATGATTCACAGAGTTCTTGGTGACATCATTTCTTG
 
. : . : . : . : . : . :
rJMSF035M08+ GCTTGATGATCATAGTGCCCATTGACCCTTCTCTCTCTCTCTGCTCACACCTTCAAACAA
rJMSF001M24+ GCTTGATGATCATAGTGCCCATTGACCCTTCTCTCTCTCTCTGCTCACACCTTCAAACAA
rJMFF005P22+ GCTTGATGATCATAGTGCCCATTGACCCTTCTCTCTCTCTCTGCTCACACCTTCAAACAA
                      ____________________________________________________________
consensus GCTTGATGATCATAGTGCCCATTGACCCTTCTCTCTCTCTCTGCTCACACCTTCAAACAA
 
. : . : . : . : . : . :
rJMSF035M08+ GTTTTACATGTCACTCACCCAGAGCCCACATTTGGATAGTTACGGCTTACTTATAAATCA
rJMSF001M24+ GTTTTACATGTCACTCACCCAGAGCCCACATTTGGATAGTTACGGCTTACTTATAAATCA
rJMFF005P22+ GTTTTACATGTCACTCACCCAGAGCCCACATTTGGATAGTTACGGCTTACTTATAAATCA
                      ____________________________________________________________
consensus GTTTTACATGTCACTCACCCAGAGCCCACATTTGGATAGTTACGGCTTACTTATAAATCA
 
. : . : . : . : . : . :
rJMSF035M08+ AAGGTTTATGTGTC
rJMSF001M24+ AAGGTTTATGTGTCATTGTAAAATC
rJMFF005P22+ AAGGTTTATGTGTCATTGTAAAATCTGTTGTAACTTGTATGCAATTTTATTCATAATCAA
                      ____________________________________________________________
consensus AAGGTTTATGTGTCATTGTAAAATCTGTTGTAACTTGTATGCAATTTTATTCATAATCAA