Contig 010974:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005P22Sequence477007976 (4)ref|XP_009629754.1|1e-68PREDICTED: caffeoylshikimate esterase-like [Nicotiana tomentosiformis]773010974 (4)ref|XP_009629754.1|4e-117PREDICTED: caffeoylshikimate esterase-like [Nicotiana tomentosiformis]
JMSF001M24Sequence366010974 (4)ref|XP_009786213.1|2e-62PREDICTED: caffeoylshikimate esterase-like [Nicotiana sylvestris]611010974 (4)ref|XP_009786213.1|4e-85PREDICTED: caffeoylshikimate esterase-like [Nicotiana sylvestris]
JMSF035M08Sequence642007976 (4)ref|XP_009786213.1|8e-24PREDICTED: caffeoylshikimate esterase-like [Nicotiana sylvestris]682010974 (4)ref|XP_009786213.1|2e-104PREDICTED: caffeoylshikimate esterase-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF005P22+                 GATGATGTCATTGAGCATTACTCAAAAGTTAAAGAAAAGCCAGAGTTGCGCGG
                      ____________________________________________________________
consensus                    GATGATGTCATTGAGCATTACTCAAAAGTTAAAGAAAAGCCAGAGTTGCGCGG
 
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rJMSF035M08+                         CTTTGGGCAATCCATGGGCGGAGCAGTTGCTCTGAAGGTTCACCT
rJMFF005P22+          GCTGCCAAGCTTCCTCTTTGGGCAATCCATGGGCGGAGCAGTTGCTCTGAAGGTTCACCT
                      ____________________________________________________________
consensus             GCTGCCAAGCTTCCTCTTTGGGCAATCCATGGGCGGAGCAGTTGCTCTGAAGGTTCACCT
 
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rJMSF035M08+          GAAGCAACCCGATGCATGGAATGGGGCGGTTCTGGTTGCACCTATGTGCAAAATTGCAGA
rJMSF001M24+                                  GGCGGTTCTGGTTGCACCTATGTGCAAAATTGCAGA
JMSF001M24-                                   GGCGGTTCTGGTTGCACCTATGTGCAAAATTGCAGA
rJMFF005P22+          GAAGCAACCCGATGCATGGAATGGGGCGGTTCTGGTTGCACCTATGTGCAAAATTGCAGA
                      ____________________________________________________________
consensus             GAAGCAACCCGATGCATGGAATGGGGCGGTTCTGGTTGCACCTATGTGCAAAATTGCAGA
 
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rJMSF035M08+          TGACATGGCTCCACCGTGGTTATTGACACAAATCCTTATCGTGGTGGCGAAATTTCTTCC
rJMSF001M24+          TGACATGGCTCCACCGTGGTTATTGACACAAATCCTTATCGTGGTGGCGAAATTTCTTCC
JMSF001M24-           TGACATGGCTCCACCGTGGTTATTGACACAAATCCTTATCGTGGTGGCGAAATTTCTTCC
rJMFF005P22+          TGACATGGCTCCACCGTGGTTATTGACACAAATCCTTATCGTGGTGGCGAAATTTCTTCC
                      ____________________________________________________________
consensus             TGACATGGCTCCACCGTGGTTATTGACACAAATCCTTATCGTGGTGGCGAAATTTCTTCC
 
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rJMSF035M08+          AAAACAGAAGCTAGTTCCGCAAAAGGATTTGGCTGAGTTAGCATTCAAAGACACAAAGAA
rJMSF001M24+          AAAACAGAAGCTAGTTCCGCAAAAGGATTTGGCTGAGTTAGCATTCAAAGACACAAAGAA
JMSF001M24-           AAAACAGAAGCTAGTTCCGCAAAAGGATTTGGCTGAGTTAGCATTCAAAGACACAAAGAA
rJMFF005P22+          AAAACAGAAGCTAGTTCCGCAAAAGGATTTGGCTGAGTTAGCATTCAAAGACACAAAGAA
                      ____________________________________________________________
consensus             AAAACAGAAGCTAGTTCCGCAAAAGGATTTGGCTGAGTTAGCATTCAAAGACACAAAGAA
 
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rJMSF035M08+          GAGAGAACAGACTAACTATAATGTCATTGGCTATAGACATAAACCGCGCTTAGGGACTGC
rJMSF001M24+          GAGAGAACAGACTAACTATAATGTCATTGGCTATAGACATAAACCGCGCTTAGGGACTGC
JMSF001M24-           GAGAGAACAGACTAACTATAATGTCATTGGCTATAGACATAAACCGCGCTTAGGGACTGC
rJMFF005P22+          GAGAGAACAGACTAACTATAATGTCATTGGCTATAGACATAAACCGCGCTTAGGGACTGC
                      ____________________________________________________________
consensus             GAGAGAACAGACTAACTATAATGTCATTGGCTATAGACATAAACCGCGCTTAGGGACTGC
 
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rJMSF035M08+          CCTGGAACTACTTAAGACTACTCAGGAGATAGAGCGATTGTTAGAAAAGGTGTCTCTGCC
rJMSF001M24+          CCTGGAACTACTTAAGACTACTCAGGAGATAGAGCGATTGTTAGAAAAGGTGTCTCTGCC
JMSF001M24-           CCTGGAACTACTTAAGACTACTCAGGAGATAGAGCGATTGTTAGAAAAGGTGTCTCTGCC
rJMFF005P22+          CCTGGAACTACTTAAGACTACTCAGGAGATAGAGCGATTGTTAGAAAAGGTGTCTCTGCC
                      ____________________________________________________________
consensus             CCTGGAACTACTTAAGACTACTCAGGAGATAGAGCGATTGTTAGAAAAGGTGTCTCTGCC
 
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rJMSF035M08+          ATTACTTATTCTGCATGGAAAGAATGATGTAGTGACTGATCCATCAGTAAGCAAAGCATT
rJMSF001M24+          ATTACTTATTCTGCATGGAAAGAATGATGTAGTGACTGATCCATCAGTAAGCAAAGCATT
JMSF001M24-           ATTACTTATTCTGCATGGAAAGAATGATGTAGTGACTGATCCATCAGTAAGCAAAGCATT
rJMFF005P22+          ATTACTTATTCTGCATGGAAAGAATGATGTAGTGACTGATCCATCAGTAAGCAAAGCATT
                      ____________________________________________________________
consensus             ATTACTTATTCTGCATGGAAAGAATGATGTAGTGACTGATCCATCAGTAAGCAAAGCATT
 
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rJMSF035M08+          GTATGAGAAGGCAAGCAGCCATGACAAGAAACTAAACCTTTATGATGAGGCTTGGCATGC
rJMSF001M24+          GTATGAGAAGGCAAGCAGCCATGACAAGAAACTAAACCTTTATGATGAGGCTTGGCATGC
JMSF001M24-           GTATGAGAAGGCAAGCAGCCATGACAAGAA                              
rJMFF005P22+          GTATGAGAAGGCAAGCAGCCATGACAAGAAACTAAACCTTTATGATGAGGCTTGGCATGC
                      ____________________________________________________________
consensus             GTATGAGAAGGCAAGCAGCCATGACAAGAAACTAAACCTTTATGATGAGGCTTGGCATGC
 
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rJMSF035M08+          CCTTTTGGAAGGTGAACCAGATGAGATGATTCACAGAGTTCTTGGTGACATCATTTCTTG
rJMSF001M24+          CCTTTTGGAAGGTGAACCAGATGAGATGATTCACAGAGTTCTTGGTGACATCATTTCTTG
rJMFF005P22+          CCTTTTGGAAGGTGAACCAGATGAGATGATTCACAGAGTTCTTGGTGACATCATTTCTTG
                      ____________________________________________________________
consensus             CCTTTTGGAAGGTGAACCAGATGAGATGATTCACAGAGTTCTTGGTGACATCATTTCTTG
 
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rJMSF035M08+          GCTTGATGATCATAGTGCCCATTGACCCTTCTCTCTCTCTCTGCTCACACCTTCAAACAA
rJMSF001M24+          GCTTGATGATCATAGTGCCCATTGACCCTTCTCTCTCTCTCTGCTCACACCTTCAAACAA
rJMFF005P22+          GCTTGATGATCATAGTGCCCATTGACCCTTCTCTCTCTCTCTGCTCACACCTTCAAACAA
                      ____________________________________________________________
consensus             GCTTGATGATCATAGTGCCCATTGACCCTTCTCTCTCTCTCTGCTCACACCTTCAAACAA
 
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rJMSF035M08+          GTTTTACATGTCACTCACCCAGAGCCCACATTTGGATAGTTACGGCTTACTTATAAATCA
rJMSF001M24+          GTTTTACATGTCACTCACCCAGAGCCCACATTTGGATAGTTACGGCTTACTTATAAATCA
rJMFF005P22+          GTTTTACATGTCACTCACCCAGAGCCCACATTTGGATAGTTACGGCTTACTTATAAATCA
                      ____________________________________________________________
consensus             GTTTTACATGTCACTCACCCAGAGCCCACATTTGGATAGTTACGGCTTACTTATAAATCA
 
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rJMSF035M08+          AAGGTTTATGTGTC                                              
rJMSF001M24+          AAGGTTTATGTGTCATTGTAAAATC                                   
rJMFF005P22+          AAGGTTTATGTGTCATTGTAAAATCTGTTGTAACTTGTATGCAATTTTATTCATAATCAA
                      ____________________________________________________________
consensus             AAGGTTTATGTGTCATTGTAAAATCTGTTGTAACTTGTATGCAATTTTATTCATAATCAA