Contig 010964:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003H24Sequence157007609 (11)630010964 (5)emb|CBI20987.3|3e-71unnamed protein product [Vitis vinifera]
JMFF006C01Sequence160007609 (11)504010964 (5)gb|EYU21923.1|3e-38hypothetical protein MIMGU_mgv1a000972mg [Erythranthe guttata]
JMFF013D22Sequence149007609 (11)658010964 (5)emb|CBI20987.3|6e-83unnamed protein product [Vitis vinifera]
JMFS053F11Sequence620010964 (5)ref|XP_009787198.1|2e-95PREDICTED: transcriptional corepressor LEUNIG isoform X3 [Nicotiana sylvestris]
JMFS139B12Sequence616010964 (5)ref|XP_011081899.1|9e-64PREDICTED: transcriptional corepressor LEUNIG [Sesamum indicum] ref|XP_011081901

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS053F11- ACAAGAGCGTTC
                      ____________________________________________________________
consensus ACAAGAGCGTTC
 
. : . : . : . : . : . :
JMFS053F11- AAGGGTGGGACGGCTCAGGTGAGATTTCAGCCTCGTCTTGGCAGGTATCTCGCAGCAGCT
rJMFF013D22+ TGGCAGGTATCTCGCAGCAGCT
                      ____________________________________________________________
consensus AAGGGTGGGACGGCTCAGGTGAGATTTCAGCCTCGTCTTGGCAGGTATCTCGCAGCAGCT
 
. : . : . : . : . : . :
JMFS053F11- GCTGAGAATGTTGTATCAATTCTTGATGTGGAGACACAAACATGCAGACAGACGTTAAAG
rJMFF013D22+ GCTGAGAATGTTGTATCAATTCTTGATGTGGAGACACAAACATGCAGACAGACGTTAAAG
                      ____________________________________________________________
consensus GCTGAGAATGTTGTATCAATTCTTGATGTGGAGACACAAACATGCAGACAGACGTTAAAG
 
. : . : . : . : . : . :
JMFS053F11- GGTCATACGAAACCAATTCACTCTGTGTGCTGGGACCCTTCAGGCGAGCATCTGGCTTCA
JMFS139B12- AGGCGAGCATCTGGCTTCA
rJMFF013D22+ GGTCATACGAAACCAATTCACTCTGTGTGCTGGGACCCTTCAGGCGAGCATCTGGCTTCA
rJMFF003H24+ AGGCGAGCATCTGGCTTCA
                      ____________________________________________________________
consensus GGTCATACGAAACCAATTCACTCTGTGTGCTGGGACCCTTCAGGCGAGCATCTGGCTTCA
 
. : . : . : . : . : . :
JMFS053F11- GTGAGCGAGGACTCAGTGAGAGTGTGGACACTGGGTTCAGGAAACGAAGGGAATTGTGTA
JMFS139B12- GTGAGCGAGGACTCAGTGAGAGTGTGGACACTGGGTTCAGGAAACGAAGGGAATTGTGTA
rJMFF013D22+ GTGAGCGAGGACTCAGTGAGAGTGTGGACACTGGGTTCAGGAAACGAAGGGAATTGTGTA
rJMFF006C01+ CGAAGGGAATNGTGTA
rJMFF003H24+ GTGAGCGAGGACTCAGTGAGAGTGTGGACACTGGGTTCAGGAAACGAAGGGAATTGTGTA
                      ____________________________________________________________
consensus GTGAGCGAGGACTCAGTGAGAGTGTGGACACTGGGTTCAGGAAACGAAGGGAATTGTGTA
 
. : . : . : . : . : . :
JMFS053F11- CACGAACTTAGTTCAAACGGCAATAAATTTCACTCATGTGTTTTCCATCCTTCCTACTCT
JMFS139B12- CACGAACTTAGTTCAAACGGCAATAAATTTCACTCATGTGTTTTCCATCCTTCCTACTCT
rJMFF013D22+ CACGAACTTAGTTCAAACGGCAATAAATTTCACTCATGTGTTTTCCATCCTTCCTACTCT
rJMFF006C01+ CANGAANTTAGTTCAANCGGCAATAAATTTCACTCATGTGTTTTCCATCCTTCCTACTCT
rJMFF003H24+ CACGAACTTAGTTCAAACGGCAATAAATTTCACTCATGTGTTTTCCATCCTTCCTACTCT
                      ____________________________________________________________
consensus CACGAACTTAGTTCAAACGGCAATAAATTTCACTCATGTGTTTTCCATCCTTCCTACTCT
 
. : . : . : . : . : . :
JMFS053F11- TCATTGCTAGTTATTGGCTGTTACCAGTCTCTAGAGCTTTGGAACATGACCGAAAACAAA
JMFS139B12- TCATTGCTAGTTATTGGCTGTTACCAGTCTCTAGAGCTTTGGAACATGACCGAAAACAAA
rJMFF013D22+ TCATTGCTAGTTATTGGCTGTTACCAGTCTCTAGAGCTTTGGAACATGACCGAAAACAAA
rJMFF006C01+ TCATTGCTAGTTATTGGCTGTTACCAGTCTCTAGAGCTTTGGAACATGACCGAAAACAAA
rJMFF003H24+ TCATTGCTAGTTATTGGCTGTTACCAGTCTCTAGAGCTTTGGAACATGACCGAAAACAAA
                      ____________________________________________________________
consensus TCATTGCTAGTTATTGGCTGTTACCAGTCTCTAGAGCTTTGGAACATGACCGAAAACAAA
 
. : . : . : . : . : . :
JMFS053F11- ACGATGACGCTTCCTGCACATGAAGGATTGATTGCTTCGTTGGCTGTATCGACTGTGGCG
JMFS139B12- ACGATGACGCTTCCTGCACATGAAGGATTGATTGCTTCGTTGGCTGTATCGACTGTGGCG
rJMFF013D22+ ACGATGACGCTTCCTGCACATGAAGGATTGATCNCTTCGTTGGCTGTATCGACTGTGGCG
rJMFF006C01+ ACGATGACGCTTCCTGCACATGAAGGATTGATTGCTTCGTTGGCTGTATCGACTGTGGCG
rJMFF003H24+ ACGATGACGCTTCCTGCACATGAAGGATTGATTGCTTCGTTGGCTGTATCGACTGTGGCG
                      ____________________________________________________________
consensus ACGATGACGCTTCCTGCACATGAAGGATTGATTGCTTCGTTGGCTGTATCGACTGTGGCG
 
. : . : . : . : . : . :
JMFS053F11- GGCTTGGTTGCTTCAGCCAGTCATGACAAGATCATTAAGCTTTGGAAGTAACGACAACGC
JMFS139B12- GGCTTGGTTGCTTCAGCCAGTCATGACAAGATCATTAAGCTTTGGAAGTAACGACAACGC
rJMFF013D22+ GGCTTGGTTGCTTCAGCCAGTCATGACAAGATCATTAAGCTTTGGAAGTAACGACAACGC
rJMFF006C01+ GGCTTGGTTGCTTCAGCCAGTCATGACAAGATCATTAAGCTTTGGAAGTAACGACAACGC
rJMFF003H24+ GGCTTGGTTGCTTCAGCCAGTCATGACAAGATCATTAAGCTTTGGAAGTAACGACAACGC
                      ____________________________________________________________
consensus GGCTTGGTTGCTTCAGCCAGTCATGACAAGATCATTAAGCTTTGGAAGTAACGACAACGC
 
. : . : . : . : . : . :
JMFS053F11- CATTACTTCGATTGGAGATGCTGCAACCTTGTTTTTCAACCCCCTTCTCCCTCCTCTTCC
JMFS139B12- CATTACTTCGATTGGAGATGCTGCAACCTTGTTTTTCAACCCCCTTCTCCCTCCTCTTCC
rJMFF013D22+ CATTACTTCGATTGGAGATGCTGCAACCTTGTTTTTCAACCCCCTTCTCCCTCCTCTTCC
rJMFF006C01+ CATTACTTCGATTGGAGATGCTGCAACCTTGTTTTTCAACCCCCTTCTCCCTCCTCTTCC
rJMFF003H24+ CATTACTTCGATTGGAGATGCTGCAACCTTGTTTTTCAACCCCCTTCTCCCTCCTCTTCC
                      ____________________________________________________________
consensus CATTACTTCGATTGGAGATGCTGCAACCTTGTTTTTCAACCCCCTTCTCCCTCCTCTTCC
 
. : . : . : . : . : . :
JMFS053F11- TGTTGTATGTTCAACTAAAATTCCTTTTGCAGAGGCTGATTANGCAGACATAGGCTTTTT
JMFS139B12- TGTTGTATGTTCAACTAAAATTCCTTTTGCAGAGGCTGATTAGGCAGACATAGGCTTTTT
rJMFF013D22+ TGTTGTATGTTCAACTAAAATTCCTTTTGCAGAGGCTGATTAGGCAGACATAGGCTTTTT
rJMFF006C01+ TGTTGTATGTTCAACTAAAATTCCTTTTGCAGAGGCTGATTAGGCAGACATAGGCTTTTT
rJMFF003H24+ TGTTGTATGTTCAACTAAAATTCCTTTTGCAGAGGCTGATTAGGCAGACATAGGCTTTTT
                      ____________________________________________________________
consensus TGTTGTATGTTCAACTAAAATTCCTTTTGCAGAGGCTGATTAGGCAGACATAGGCTTTTT
 
. : . : . : . : . : . :
JMFS053F11- AGTTTTTG
JMFS139B12- AGTTTTTGGTGTTTAATTGTGTAAGTTGATTTCTGTGGTAAGATTACTCCTGTCAATTCT
rJMFF013D22+ AGTTTTTGGTGTTTAATTGTGTAAGTTGATTTCTGTGGTAAGATTACTCCTGTCAATTCT
rJMFF006C01+ AGTTTTTGGTGTTTAATTGTGTAAGTTGATTTCTGTGGTAAGATTACTCCTGTCAATTCT
rJMFF003H24+ AGTTTTTGGTGTTTAATTGTGTAAGTTGATTTCTGTGGTAAGATTACTCCTGTCAATTCT
                      ____________________________________________________________
consensus AGTTTTTGGTGTTTAATTGTGTAAGTTGATTTCTGTGGTAAGATTACTCCTGTCAATTCT
 
. : . : . : . : . : . :
JMFS139B12- GGTGCAG
rJMFF013D22+ GGTGCAGTGGATGTTTATTATCATNGAAAAACTCAA
rJMFF006C01+ GGTGCAGTGGATGTTTATTATCATGGAAAAACTCAAATATTTGTTACAGAAAT
rJMFF003H24+ GGTGCAGTGGATGTTTATTATCATGGAAAAACTCAAATATTTGTTACAGAAATTTTAAGT
                      ____________________________________________________________
consensus GGTGCAGTGGATGTTTATTATCATGGAAAAACTCAAATATTTGTTACAGAAATTTTAAGT