Contig 010964:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003H24Sequence157007609 (11)630010964 (5)emb|CBI20987.3|3e-71unnamed protein product [Vitis vinifera]
JMFF006C01Sequence160007609 (11)504010964 (5)gb|EYU21923.1|3e-38hypothetical protein MIMGU_mgv1a000972mg [Erythranthe guttata]
JMFF013D22Sequence149007609 (11)658010964 (5)emb|CBI20987.3|6e-83unnamed protein product [Vitis vinifera]
JMFS053F11Sequence620010964 (5)ref|XP_009787198.1|2e-95PREDICTED: transcriptional corepressor LEUNIG isoform X3 [Nicotiana sylvestris]
JMFS139B12Sequence616010964 (5)ref|XP_011081899.1|9e-64PREDICTED: transcriptional corepressor LEUNIG [Sesamum indicum] ref|XP_011081901

Alignment

This contig is upended


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JMFS053F11-                                                           ACAAGAGCGTTC
                      ____________________________________________________________
consensus                                                             ACAAGAGCGTTC
 
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JMFS053F11-           AAGGGTGGGACGGCTCAGGTGAGATTTCAGCCTCGTCTTGGCAGGTATCTCGCAGCAGCT
rJMFF013D22+                                                TGGCAGGTATCTCGCAGCAGCT
                      ____________________________________________________________
consensus             AAGGGTGGGACGGCTCAGGTGAGATTTCAGCCTCGTCTTGGCAGGTATCTCGCAGCAGCT
 
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JMFS053F11-           GCTGAGAATGTTGTATCAATTCTTGATGTGGAGACACAAACATGCAGACAGACGTTAAAG
rJMFF013D22+          GCTGAGAATGTTGTATCAATTCTTGATGTGGAGACACAAACATGCAGACAGACGTTAAAG
                      ____________________________________________________________
consensus             GCTGAGAATGTTGTATCAATTCTTGATGTGGAGACACAAACATGCAGACAGACGTTAAAG
 
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JMFS053F11-           GGTCATACGAAACCAATTCACTCTGTGTGCTGGGACCCTTCAGGCGAGCATCTGGCTTCA
JMFS139B12-                                                    AGGCGAGCATCTGGCTTCA
rJMFF013D22+          GGTCATACGAAACCAATTCACTCTGTGTGCTGGGACCCTTCAGGCGAGCATCTGGCTTCA
rJMFF003H24+                                                   AGGCGAGCATCTGGCTTCA
                      ____________________________________________________________
consensus             GGTCATACGAAACCAATTCACTCTGTGTGCTGGGACCCTTCAGGCGAGCATCTGGCTTCA
 
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JMFS053F11-           GTGAGCGAGGACTCAGTGAGAGTGTGGACACTGGGTTCAGGAAACGAAGGGAATTGTGTA
JMFS139B12-           GTGAGCGAGGACTCAGTGAGAGTGTGGACACTGGGTTCAGGAAACGAAGGGAATTGTGTA
rJMFF013D22+          GTGAGCGAGGACTCAGTGAGAGTGTGGACACTGGGTTCAGGAAACGAAGGGAATTGTGTA
rJMFF006C01+                                                      CGAAGGGAATNGTGTA
rJMFF003H24+          GTGAGCGAGGACTCAGTGAGAGTGTGGACACTGGGTTCAGGAAACGAAGGGAATTGTGTA
                      ____________________________________________________________
consensus             GTGAGCGAGGACTCAGTGAGAGTGTGGACACTGGGTTCAGGAAACGAAGGGAATTGTGTA
 
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JMFS053F11-           CACGAACTTAGTTCAAACGGCAATAAATTTCACTCATGTGTTTTCCATCCTTCCTACTCT
JMFS139B12-           CACGAACTTAGTTCAAACGGCAATAAATTTCACTCATGTGTTTTCCATCCTTCCTACTCT
rJMFF013D22+          CACGAACTTAGTTCAAACGGCAATAAATTTCACTCATGTGTTTTCCATCCTTCCTACTCT
rJMFF006C01+          CANGAANTTAGTTCAANCGGCAATAAATTTCACTCATGTGTTTTCCATCCTTCCTACTCT
rJMFF003H24+          CACGAACTTAGTTCAAACGGCAATAAATTTCACTCATGTGTTTTCCATCCTTCCTACTCT
                      ____________________________________________________________
consensus             CACGAACTTAGTTCAAACGGCAATAAATTTCACTCATGTGTTTTCCATCCTTCCTACTCT
 
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JMFS053F11-           TCATTGCTAGTTATTGGCTGTTACCAGTCTCTAGAGCTTTGGAACATGACCGAAAACAAA
JMFS139B12-           TCATTGCTAGTTATTGGCTGTTACCAGTCTCTAGAGCTTTGGAACATGACCGAAAACAAA
rJMFF013D22+          TCATTGCTAGTTATTGGCTGTTACCAGTCTCTAGAGCTTTGGAACATGACCGAAAACAAA
rJMFF006C01+          TCATTGCTAGTTATTGGCTGTTACCAGTCTCTAGAGCTTTGGAACATGACCGAAAACAAA
rJMFF003H24+          TCATTGCTAGTTATTGGCTGTTACCAGTCTCTAGAGCTTTGGAACATGACCGAAAACAAA
                      ____________________________________________________________
consensus             TCATTGCTAGTTATTGGCTGTTACCAGTCTCTAGAGCTTTGGAACATGACCGAAAACAAA
 
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JMFS053F11-           ACGATGACGCTTCCTGCACATGAAGGATTGATTGCTTCGTTGGCTGTATCGACTGTGGCG
JMFS139B12-           ACGATGACGCTTCCTGCACATGAAGGATTGATTGCTTCGTTGGCTGTATCGACTGTGGCG
rJMFF013D22+          ACGATGACGCTTCCTGCACATGAAGGATTGATCNCTTCGTTGGCTGTATCGACTGTGGCG
rJMFF006C01+          ACGATGACGCTTCCTGCACATGAAGGATTGATTGCTTCGTTGGCTGTATCGACTGTGGCG
rJMFF003H24+          ACGATGACGCTTCCTGCACATGAAGGATTGATTGCTTCGTTGGCTGTATCGACTGTGGCG
                      ____________________________________________________________
consensus             ACGATGACGCTTCCTGCACATGAAGGATTGATTGCTTCGTTGGCTGTATCGACTGTGGCG
 
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JMFS053F11-           GGCTTGGTTGCTTCAGCCAGTCATGACAAGATCATTAAGCTTTGGAAGTAACGACAACGC
JMFS139B12-           GGCTTGGTTGCTTCAGCCAGTCATGACAAGATCATTAAGCTTTGGAAGTAACGACAACGC
rJMFF013D22+          GGCTTGGTTGCTTCAGCCAGTCATGACAAGATCATTAAGCTTTGGAAGTAACGACAACGC
rJMFF006C01+          GGCTTGGTTGCTTCAGCCAGTCATGACAAGATCATTAAGCTTTGGAAGTAACGACAACGC
rJMFF003H24+          GGCTTGGTTGCTTCAGCCAGTCATGACAAGATCATTAAGCTTTGGAAGTAACGACAACGC
                      ____________________________________________________________
consensus             GGCTTGGTTGCTTCAGCCAGTCATGACAAGATCATTAAGCTTTGGAAGTAACGACAACGC
 
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JMFS053F11-           CATTACTTCGATTGGAGATGCTGCAACCTTGTTTTTCAACCCCCTTCTCCCTCCTCTTCC
JMFS139B12-           CATTACTTCGATTGGAGATGCTGCAACCTTGTTTTTCAACCCCCTTCTCCCTCCTCTTCC
rJMFF013D22+          CATTACTTCGATTGGAGATGCTGCAACCTTGTTTTTCAACCCCCTTCTCCCTCCTCTTCC
rJMFF006C01+          CATTACTTCGATTGGAGATGCTGCAACCTTGTTTTTCAACCCCCTTCTCCCTCCTCTTCC
rJMFF003H24+          CATTACTTCGATTGGAGATGCTGCAACCTTGTTTTTCAACCCCCTTCTCCCTCCTCTTCC
                      ____________________________________________________________
consensus             CATTACTTCGATTGGAGATGCTGCAACCTTGTTTTTCAACCCCCTTCTCCCTCCTCTTCC
 
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JMFS053F11-           TGTTGTATGTTCAACTAAAATTCCTTTTGCAGAGGCTGATTANGCAGACATAGGCTTTTT
JMFS139B12-           TGTTGTATGTTCAACTAAAATTCCTTTTGCAGAGGCTGATTAGGCAGACATAGGCTTTTT
rJMFF013D22+          TGTTGTATGTTCAACTAAAATTCCTTTTGCAGAGGCTGATTAGGCAGACATAGGCTTTTT
rJMFF006C01+          TGTTGTATGTTCAACTAAAATTCCTTTTGCAGAGGCTGATTAGGCAGACATAGGCTTTTT
rJMFF003H24+          TGTTGTATGTTCAACTAAAATTCCTTTTGCAGAGGCTGATTAGGCAGACATAGGCTTTTT
                      ____________________________________________________________
consensus             TGTTGTATGTTCAACTAAAATTCCTTTTGCAGAGGCTGATTAGGCAGACATAGGCTTTTT
 
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JMFS053F11-           AGTTTTTG                                                    
JMFS139B12-           AGTTTTTGGTGTTTAATTGTGTAAGTTGATTTCTGTGGTAAGATTACTCCTGTCAATTCT
rJMFF013D22+          AGTTTTTGGTGTTTAATTGTGTAAGTTGATTTCTGTGGTAAGATTACTCCTGTCAATTCT
rJMFF006C01+          AGTTTTTGGTGTTTAATTGTGTAAGTTGATTTCTGTGGTAAGATTACTCCTGTCAATTCT
rJMFF003H24+          AGTTTTTGGTGTTTAATTGTGTAAGTTGATTTCTGTGGTAAGATTACTCCTGTCAATTCT
                      ____________________________________________________________
consensus             AGTTTTTGGTGTTTAATTGTGTAAGTTGATTTCTGTGGTAAGATTACTCCTGTCAATTCT
 
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JMFS139B12-           GGTGCAG                                                     
rJMFF013D22+          GGTGCAGTGGATGTTTATTATCATNGAAAAACTCAA                        
rJMFF006C01+          GGTGCAGTGGATGTTTATTATCATGGAAAAACTCAAATATTTGTTACAGAAAT       
rJMFF003H24+          GGTGCAGTGGATGTTTATTATCATGGAAAAACTCAAATATTTGTTACAGAAATTTTAAGT
                      ____________________________________________________________
consensus             GGTGCAGTGGATGTTTATTATCATGGAAAAACTCAAATATTTGTTACAGAAATTTTAAGT