Contig 010961:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002C18Sequence476010961 (3)ref|XP_006439765.1|2e-111hypothetical protein CICLE_v10022245mg [Citrus clementina] gb|ESR53005.1| hypoth649010961 (3)ref|XP_009601098.1|7e-87PREDICTED: rac-like GTP-binding protein 3 isoform X1 [Nicotiana tomentosiformis
JMSF012J06Sequence118019940771010961 (3)ref|XP_009601098.1|4e-132PREDICTED: rac-like GTP-binding protein 3 isoform X1 [Nicotiana tomentosiformis

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012J06+                       ATGGCTGCNAGTGCTTCAAGGTTCATCAAATGTGTGACTGTTGGTGA
                      ____________________________________________________________
consensus                          ATGGCTGCNAGTGCTTCAAGGTTCATCAAATGTGTGACTGTTGGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF002C18-             GGGCTGTTGGCAAGACTTGTATGCTTATTTGCTACACCAGTAACAAATTCCCCACTGA
rJMSF012J06+          TGGGGCTGTTGNCAAGACTTGTATGCTTATTTGCTACACCAGTAACAAATTCCCCACTGA
                      ____________________________________________________________
consensus             TGGGGCTGTTGGCAAGACTTGTATGCTTATTTGCTACACCAGTAACAAATTCCCCACTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF002C18-           CTATATTCCAACTGTATTTGATAACTTCAGTGCAAATGTAGTAGCTGAAGGAACTACAGT
rJMSF012J06+          CTATATTCCAACTGTATTTGATAACTTCAGTGCAAATGTAGTAGCTGAAGGAACTACAGT
                      ____________________________________________________________
consensus             CTATATTCCAACTGTATTTGATAACTTCAGTGCAAATGTAGTAGCTGAAGGAACTACAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF002C18-           CAACCTAGGACTTTGGGATACTGCTGGACAAGAAGATTACAACAGATTGAGGCCCTTGAG
rJMSF012J06+          CAACCTAGGACTTTGGGATACTGCTGGACAAGAAGATTACAACAGATTGAGGCCCTTGAG
rJMFF002C18+                     TTTGGGATACTGCTGGACAAGAAGATTACAACAGATTGAGGCCCTTGAG
                      ____________________________________________________________
consensus             CAACCTAGGACTTTGGGATACTGCTGGACAAGAAGATTACAACAGATTGAGGCCCTTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF002C18-           CTATCGAGGAGCCGACGTGTTTGTTCTAGCGTTTTCATTAGTCAGTCGTGCAAGCTATGA
rJMSF012J06+          CTATCGAGGAGCCGACGTGTTTGTTCTAGCGTTTTCATTAGTCAGTCGTGCAAGCTATGA
rJMFF002C18+          CTATCGAGGAGCCGACGTGTTTGTTCTAGCGTTTTCATTAGTCAGTCGTGCAAGCTATGA
                      ____________________________________________________________
consensus             CTATCGAGGAGCCGACGTGTTTGTTCTAGCGTTTTCATTAGTCAGTCGTGCAAGCTATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF002C18-           AAACATACTCAAAAAGTGGATCCCCGAACTTCAACATTTTGCTCCCGGTACTCCAGTGGT
rJMSF012J06+          AAACATACTCAAAAAGTGGATCCCCGAACTTCAACATTTTGCTCCCGGTACTCCAGTGGT
rJMFF002C18+          AAACATACTCAAAAAGTGGATCCCCGAACTTCAACATTTTGCTCCCGGTACTCCAGTGGT
                      ____________________________________________________________
consensus             AAACATACTCAAAAAGTGGATCCCCGAACTTCAACATTTTGCTCCCGGTACTCCAGTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF002C18-           TCTGGTTGGCACGAAACTAGATCTTCGTGAGGATAAGCATTACCTAGCGGATCATCCTGG
rJMSF012J06+          TCTGGTTGGCACGAAACTAGATCTTCGTGAGGATAAGCATTACCTAGCGGATCATCCTGG
rJMFF002C18+          TCTGGTTGGCACGAAACTAGATCTTCGTGAGGATAAGCATTACCTAGCGGATCATCCTGG
                      ____________________________________________________________
consensus             TCTGGTTGGCACGAAACTAGATCTTCGTGAGGATAAGCATTACCTAGCGGATCATCCTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF002C18-           ACTAGTTCCCGTGACCACTGCACAGGGAGAGGAGCTCCGCAAACAAATTGGTGCTGCCTA
rJMSF012J06+          ACTAGTTCCCGTGACCACTGCACAGGGAGAGGAGCTCCGCAAACAAATTGGTGCTGCCTA
rJMFF002C18+          ACTAGTTCCCGTGACCACTGCACAGGGAGAGGAGCTCCGCAAACAAATTGGTGCTGCCTA
                      ____________________________________________________________
consensus             ACTAGTTCCCGTGACCACTGCACAGGGAGAGGAGCTCCGCAAACAAATTGGTGCTGCCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF002C18-           CTATATTGAATGCAGCTCTAAAACTCAACAGAATGTGAAAGCGGTTTTTGATGCTGCG  
rJMSF012J06+          CTATATTGAATGCAGCTCTAAAACTCAACAGAATGTGAAAGCGGTTTTTGATGCTGCGAT
rJMFF002C18+          CTATATTGAATGCAGCTCTAAAACTCAACAGAATGTGAAAGCGGTTTTTGATGCTGCGAT
                      ____________________________________________________________
consensus             CTATATTGAATGCAGCTCTAAAACTCAACAGAATGTGAAAGCGGTTTTTGATGCTGCGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012J06+          CAAGGTTGTTATCAAGCCACCGCAGAAACAAAGTGAGAAGAAGAAGCCACGTCGAGGATG
rJMFF002C18+          CAAGGTTGTTATCAAGCCACCGCAGAAACAAAGTGAGAAGAAGAAGCCACGTCGAGGATG
                      ____________________________________________________________
consensus             CAAGGTTGTTATCAAGCCACCGCAGAAACAAAGTGAGAAGAAGAAGCCACGTCGAGGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012J06+          TTTTGTAAATATTCTGTGTGGTCGAAAGCTCGTCCATTGAGGCGTTGTGTTTGCAGTGTA
rJMFF002C18+          TTTTGTAAATATTCTGTGTGGTCGAAAGCTCGTCCATTGAGGCGTTGTGTTTGCAGTGTA
                      ____________________________________________________________
consensus             TTTTGTAAATATTCTGTGTGGTCGAAAGCTCGTCCATTGAGGCGTTGTGTTTGCAGTGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012J06+          GAGGCCTTGGCGTGATGATTCATCAACCCTGTCGATTTTCTACCAGTTTTTAATTATTTA
rJMFF002C18+          GAGGCCTTGGCGTGATGATTCATCAACCCTGTCGATTTTCTACCAGTTTTTAATTATTTA
                      ____________________________________________________________
consensus             GAGGCCTTGGCGTGATGATTCATCAACCCTGTCGATTTTCTACCAGTTTTTAATTATTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012J06+          TTTCAGCTTATTATATACATAGATAGATCATATCATAGCTGAAGATACAACCTATGAGGT
rJMFF002C18+          TTTCAGCTTATTATATACATAGATAGATCATATCATAGCTGAAGATACAACCTATGAGGT
                      ____________________________________________________________
consensus             TTTCAGCTTATTATATACATAGATAGATCATATCATAGCTGAAGATACAACCTATGAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012J06+          CCAT                                                        
rJMFF002C18+          CCATGAAACTTGATTGCTAAAAGCTCATCTAATGAATGTTTAAGCCTTTCTCTTCTGTGC
                      ____________________________________________________________
consensus             CCATGAAACTTGATTGCTAAAAGCTCATCTAATGAATGTTTAAGCCTTTCTCTTCTGTGC