| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001D11 | Sequence | 492 | 013250 (7) | sp|O22046.1|CHSE_IPONI | 1e-95 | RecName: Full=Chalcone synthase E; AltName: Full=Naringenin-chalcone synthase E | 742 | 010960 (4) | sp|O22046.1|CHSE_IPONI | 8e-138 | RecName: Full=Chalcone synthase E; AltName: Full=Naringenin-chalcone synthase E |
| JMFF001O13 | Sequence | 568 | 013250 (7) | sp|O22046.1|CHSE_IPONI | 5e-117 | RecName: Full=Chalcone synthase E; AltName: Full=Naringenin-chalcone synthase E | 762 | 010960 (4) | sp|O22046.1|CHSE_IPONI | 2e-133 | RecName: Full=Chalcone synthase E; AltName: Full=Naringenin-chalcone synthase E |
| JMFF021D09 | Sequence | 402 | 013250 (7) | sp|O22046.1|CHSE_IPONI | 2e-71 | RecName: Full=Chalcone synthase E; AltName: Full=Naringenin-chalcone synthase E | 657 | 010960 (4) | sp|O22046.1|CHSE_IPONI | 3e-114 | RecName: Full=Chalcone synthase E; AltName: Full=Naringenin-chalcone synthase E |
| JMSF008H09 | Sequence | 536 | 013250 (7) | sp|O22046.1|CHSE_IPONI | 4e-107 | RecName: Full=Chalcone synthase E; AltName: Full=Naringenin-chalcone synthase E | 757 | 010960 (4) | sp|O22046.1|CHSE_IPONI | 2e-132 | RecName: Full=Chalcone synthase E; AltName: Full=Naringenin-chalcone synthase E |
This contig is upended
. : . : . : . : . : . :
rJMFF001D11+ GN
____________________________________________________________
consensus GN
. : . : . : . : . : . :
rJMFF001D11+ GGAGAACAACAAAGGCGCCCGCGTGTTGGTGGTTTGCTCAGAGATCACCGCGGTCACATT
rJMSF008H09+ CGTGTTGGTGGTTTGCTCAGAGATCACCGCGGTCACATT
rJMFF001O13+ CGTGTTGGTGGTTTGCTCAGAGATCACCGCGGTCACATT
____________________________________________________________
consensus GGAGAACAACAAAGGCGCCCGCGTGTTGGTGGTTTGCTCAGAGATCACCGCGGTCACATT
. : . : . : . : . : . :
rJMFF001D11+ CCGTGGCCCCAGTGATGCCCACTTGGACAGCNTCGTGGGACAGGCCCTTTTCGGGGACGG
rJMFF021D09+ CGTGGGACAGGCCCTTTTCGGGGACGG
rJMSF008H09+ CCGTGGCCCCAGTGATGCCCACTTGGACAGCCTCGTGGGACAGGCCCTTTTCGGGGACGG
rJMFF001O13+ CCGTGGCCCCAGTGATGCCCACTTGGACAGCCTCGTGGGACAGGCCCTTTTCGGGGACGG
____________________________________________________________
consensus CCGTGGCCCCAGTGATGCCCACTTGGACAGCCTCGTGGGACAGGCCCTTTTCGGGGACGG
. : . : . : . : . : . :
rJMFF001D11+ GGCCGCCGCGCTGATCATAGGCTCAGACCCAGACCCAGACCTCGAAAGGCCATTATTCCA
rJMFF021D09+ GGCCGCCGCGCTGATCATAGGCTCAGACCCAGACCCAGACCTCGAAAGGCCATTATTCCA
rJMSF008H09+ GGCCGCCGCGCTGATCATAGGCTCAGACCCAGACCCAGACCTCGAAAGGCCATTATTCCA
rJMFF001O13+ GGCCGCCGCGCTGATCATAGGCTCAGACCCAGACCCAGACCTCGAAAGGCCATTATTCCA
____________________________________________________________
consensus GGCCGCCGCGCTGATCATAGGCTCAGACCCAGACCCAGACCTCGAAAGGCCATTATTCCA
. : . : . : . : . : . :
rJMFF001D11+ GCTTGTCTCCGCCGCCCAAACTATCCTCCCGGATAGCGGCGGCGCCATTGATGGGCACCT
rJMFF021D09+ GCTTGTCTCCGCCGCCCAAACTATCCTCCCGGATAGCGGCGGCGCCATTGATGGGCACCT
rJMSF008H09+ GCTTGTCTCCGCCGCCCAAACTATCCTCCCGGATAGCGGCGGCGCCATTGATGGGCACCT
rJMFF001O13+ GCTTGTCTCCGCCGCCCAAACTATCCTCCCGGATAGCGGCGGCGCCATTGATGGGCACCT
____________________________________________________________
consensus GCTTGTCTCCGCCGCCCAAACTATCCTCCCGGATAGCGGCGGCGCCATTGATGGGCACCT
. : . : . : . : . : . :
rJMFF001D11+ CCGGGAAGTTGGGCTAACCTTCCATTTACTCAAAGACGTTCCTGGGCTCATATCAAAGCA
rJMFF021D09+ CCGGGAAGTTGGGCTAACCTTCCATTTACTCAAAGACGTTCCTGGGCTCATATCAAAGCA
rJMSF008H09+ CCGGGAAGTTGGGCTAACCTTCCATTTACTCAAAGACGTTCCTGGGCTCATATCAAAGCA
rJMFF001O13+ CCGGGAAGTTGGGCTAACCTTCCATTTACTCAAAGACGTTCCTGGGCTCATATCAAAGCA
____________________________________________________________
consensus CCGGGAAGTTGGGCTAACCTTCCATTTACTCAAAGACGTTCCTGGGCTCATATCAAAGCA
. : . : . : . : . : . :
rJMFF001D11+ CATTGAGAAAAGCTTAAACGAGGCGTTTCAACCTCTGGGTATTCATGATTGGAACTCCCT
rJMFF021D09+ CATTGAGAAAAGCTTAAACGAGGCGTTTCAACCTCTGGGTATTCATGATTGGAACTCCCT
rJMSF008H09+ CATTGAGAAAAGCTTAAACGAGGCGTTTCAACCTCTGGGTATTCATGATTGGAACTCCCT
rJMFF001O13+ CATTGAGAAAAGCTTAAACGAGGCGTTTCAACCTCTGGGTATTCATGATTGGAACTCCCT
____________________________________________________________
consensus CATTGAGAAAAGCTTAAACGAGGCGTTTCAACCTCTGGGTATTCATGATTGGAACTCCCT
. : . : . : . : . : . :
rJMFF001D11+ TTTCTGGATCGCTCATCCCGGCGGGCCGGCCATTCTTGACCAAGTGGAAGAAAAGCTAGA
rJMFF021D09+ TTTCTGGATCGCTCATCCCGGCGGGCCGGCCATTCTTGACCAAGTGGAAGAAAAGCTAGA
rJMSF008H09+ TTTCTGGATCGCTCATCCCGGCGGGCCGGCCATTCTTGACCAAGTGGAAGAAAAGCTAGA
rJMFF001O13+ TTTCTGGATCGCTCATCCCGGCGGGCCGGCCATTCTTGACCAAGTGGAAGAAAAGCTAGA
____________________________________________________________
consensus TTTCTGGATCGCTCATCCCGGCGGGCCGGCCATTCTTGACCAAGTGGAAGAAAAGCTAGA
. : . : . : . : . : . :
rJMFF001D11+ GCTCAAGCCGGAGAAACTTCGTGCGACAAGGCACGTGTTGAGTGAATATGGGAACATGTC
rJMFF021D09+ GCTCAAGCCGGAGAAACTTCGTGCGACAAGGCACGTGTTGAGTGAATATGGGAACATGTC
rJMSF008H09+ GCTCAAGCCGGAGAAACTTCGTGCGACAAGGCACGTGTTGAGTGAATATGGGAACATGTC
rJMFF001O13+ GCTCAAGCCGGAGAAACTTCGTGCGACAAGGCACGTGTTGAGTGAATATGGGAACATGTC
____________________________________________________________
consensus GCTCAAGCCGGAGAAACTTCGTGCGACAAGGCACGTGTTGAGTGAATATGGGAACATGTC
. : . : . : . : . : . :
rJMFF001D11+ TAGTGCATGTGTGTTGTTCATTTTGGATGAAATGAGGAAGGCGTCCTCAAAGGAAGGGCT
rJMFF021D09+ TAGTGCATGTGTGTTGTTCATTTTGGATGAAATGAGGAAGGCGTCCTCAAAGGAAGGGCT
rJMSF008H09+ TAGTGCATGTGTGTTGTTCATTTTGGATGAAATGAGGAAGGCGTCCTCAAAGGAAGGGCT
rJMFF001O13+ TAGTGCATGTGTGTTGTTCATTTTGGATGAAATGAGGAAGGCGTCCTCAAAGGAAGGGCT
____________________________________________________________
consensus TAGTGCATGTGTGTTGTTCATTTTGGATGAAATGAGGAAGGCGTCCTCAAAGGAAGGGCT
. : . : . : . : . : . :
rJMFF001D11+ TAACACCACAGGTGAAGGGCTTGAGTGGGGAGTGCTGTTTGGATTTGGGCCTGGCTTGAC
rJMFF021D09+ TAACACCACAGGTGAAGGGCTTGAGTGGGGAGTGCTGTTTGGATTTGGGCCTGGCTTGAC
rJMSF008H09+ TAACACCACAGGTGAAGGGCTTGAGTGGGGAGTGCTGTTTGGATTTGGGCCTGGCTTGAC
rJMFF001O13+ TAACACCACAGGTGAAGGGCTTGAGTGGGGAGTGCTGTTTGGATTTGGGCCTGGCTTGAC
____________________________________________________________
consensus TAACACCACAGGTGAAGGGCTTGAGTGGGGAGTGCTGTTTGGATTTGGGCCTGGCTTGAC
. : . : . : . : . : . :
rJMFF001D11+ CGTTGAGACCGTTGTTCTTCATAGTGTTTCAGCTTAATATATTATTATATATATGGATAT
rJMFF021D09+ CGTTGAGACCGTTGTTCTTCATAGTGTTTCAGCTTAATATATTATTATATATATGGATAT
rJMSF008H09+ CGTTGAGACCGTTGTTCTTCATAGTGTTTCAGCTTAATATATTATTATATATATGGATAT
rJMFF001O13+ CGTTGAGACCGTTGTTCTTCATAGTGTTTCAGCTTAATATATTATTATATATATGGATAT
____________________________________________________________
consensus CGTTGAGACCGTTGTTCTTCATAGTGTTTCAGCTTAATATATTATTATATATATGGATAT
. : . : . : . : . : . :
rJMFF001D11+ ATGTGTTTTGAATTGGGTTTCCATGGCACGTGGATTGTTTCCATGGCACGTGGATTGTGT
rJMFF021D09+ ATGTGTTTTGAATTGGGTTTCCATGGCACGTGGATTGTTTCCATGGCACGTGGATTGTGT
rJMSF008H09+ ATGTGTTTTGAATTGGGTTTCCATGGCACGTGGATTGTTTCCATGGCACGTGGATTGTGT
rJMFF001O13+ ATGTGTTTTGAATTGGGTTTCCATGGCACGTGGATTGTTTCCATGGCACGTGGATTGTGT
____________________________________________________________
consensus ATGTGTTTTGAATTGGGTTTCCATGGCACGTGGATTGTTTCCATGGCACGTGGATTGTGT
. : . : . : . : . : . :
rJMFF001D11+ TTTATTATGTCTAAATGGTG
rJMFF021D09+ TTTATTATGTCTAAATGGTGTCTAAAA
rJMSF008H09+ TTTATTATGTCTAAATGGTGTCTAAAAACATGTGTAATAATGCTAAATAATGTTTATG
rJMFF001O13+ TTTATTATGTCTAAATGGTGTCT-AAAACATGTGTAATAATGCTAAATAATNTTTATGTA
____________________________________________________________
consensus TTTATTATGTCTAAATGGTGTCTAAAAACATGTGTAATAATGCTAAATAATGTTTATGTA