Contig 010956:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF051J02+                          ATTCCACTTGACAGCCCAGTTGCTGAGCATGCTCAAATTGACCC
                      ____________________________________________________________
consensus                             ATTCCACTTGACAGCCCAGTTGCTGAGCATGCTCAAATTGACCC
 
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rJMSF051J02+          AGAACTGGAAAATGCATTTATTTGTCATTTGCAGGACCATTGGTTCTGTATCCGGAAAGT
rJMFF001E22+             ACTGGAAAATGCATTTATTTGTCATTTGCAGGACCATTGNTTCTGTATCCGGAAAGT
                      ____________________________________________________________
consensus             AGAACTGGAAAATGCATTTATTTGTCATTTGCAGGACCATTGGTTCTGTATCCGGAAAGT
 
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rJMSF051J02+          AAACGGGGAGTGGTATAATTTTGATAGTCTTTACGCTGCCCCAGAACACCTTTCTAAGTT
rJMFF001E22+          AAACGGGGAGTGGTATAATTTTGATAGTCTTTACGCTGCCCCAGAACACCTTTCTAAGTT
                      ____________________________________________________________
consensus             AAACGGGGAGTGGTATAATTTTGATAGTCTTTACGCTGCCCCAGAACACCTTTCTAAGTT
 
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rJMSF051J02+          TTACCTTTCAGCTTATCTCGACTCCTTGAAAGGTTTTGGCTGGAGCATTTTTCTGGTAAG
rJMFF001E22+          TTACCTTTCAGCTTATCTCGACTCCTTGAAAGGTTTTGGCTGGAGCATTTTTCTGGTAAG
                      ____________________________________________________________
consensus             TTACCTTTCAGCTTATCTCGACTCCTTGAAAGGTTTTGGCTGGAGCATTTTTCTGGTAAG
 
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rJMSF051J02+          GGGAAATTTTCCCAAGGACTGTCCAATCACTTCCTCTGAAGCATCTAACGGTTATGGACA
rJMFF028L16+                      CAAGGACTGTCCAATCACTTCCTGTGAAGCATCTANCGGTTATGGACA
rJMFF001E22+          GGGAAATTTTCCCAAGGACTGTCCAATCACTTCCTCTGAAGCATCTAACGGTTATGGACA
                      ____________________________________________________________
consensus             GGGAAATTTTCCCAAGGACTGTCCAATCACTTCCTCTGAAGCATCTAACGGTTATGGACA
 
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rJMSF051J02+          GTGGCTCACGCCTGAAGATGCAGAGAGGATTACAAAGTCTTACAACCCGGGTGGGAGAAC
rJMFF028L16+          GTGGCTCNCGCCTGAAGATGCAGAGAGGATTACAAAGTCTTACAACCCGGGTGGGAGAAC
rJMFF001E22+          GTGGCTCACGCCTGAAGATGCAGAGAGGATTACAAAGTCTTACAACCCGGGTGGGAGAAC
                      ____________________________________________________________
consensus             GTGGCTCACGCCTGAAGATGCAGAGAGGATTACAAAGTCTTACAACCCGGGTGGGAGAAC
 
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rJMSF051J02+          AGGTAGCAGACCTGGTGAAAGGCAGCAGCTGTCTGGTATGGAATTCCAGTATAGGGATCA
rJMFF028L16+          AGGTAGCAGACCTGGTGAAAGGCAGCAGCTGTCTGGTATGGAATTCCAGTATAGGGATCA
rJMFF001E22+          AGGTAGCAGACCTGGTGAAAGGCAGCAGCTGTCTGGTATGGAATTCCAGTATAGGGATCA
                      ____________________________________________________________
consensus             AGGTAGCAGACCTGGTGAAAGGCAGCAGCTGTCTGGTATGGAATTCCAGTATAGGGATCA
 
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rJMSF051J02+          AGAACTCTTACTAGACGAAGATGATGAAGATTTGAAAGCTGCAATAGCTGCAAGCTTGAT
rJMFF028L16+          AGAACTCTTACTAGACGAAGATGATGAAGATTTGAAAGCTGCAATAGCTGCAAGCTTGAT
rJMFF001E22+          AGAACTCTTACTAGACGAAGATGATGAAGATTTGAAAGCTGCAATAGCTGCAAGCTTGAT
                      ____________________________________________________________
consensus             AGAACTCTTACTAGACGAAGATGATGAAGATTTGAAAGCTGCAATAGCTGCAAGCTTGAT
 
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rJMSF051J02+          GGATTCCTCACCTGCTGTCAAAACCGTAGTTAGCAGCACTTCAGAAGAAGCAAATAAGGG
rJMFF028L16+          GGATTCCTCACCTGCTGTCAAAACCGTAGTTAGCAGCACTTCAGAAGAAGCAAATAAGGG
rJMFF001E22+          GGATTCCTCACCTGCTGTCAAAACCGTAGTTAGCAGCACTTCAGAAGAAGCAAATAAGGG
                      ____________________________________________________________
consensus             GGATTCCTCACCTGCTGTCAAAACCGTAGTTAGCAGCACTTCAGAAGAAGCAAATAAGGG
 
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rJMSF051J02+          AAGCAAAGGAGAGAGTTCATGAAATTAAGCCCTCACCTCCAATTTAAGCTTTTTATAAAA
rJMFF028L16+          AAGCAAAGGAGAGAGTTCATGAAATTAAGCCCTCACCTCCAATTTAAGCTTTTTATAAAA
rJMFF001E22+          AAGCAAAGGAGAGAGTTCATGAAATTAAGCCCTCACCTCCAATTTAAGCTTTTTATAAAA
                      ____________________________________________________________
consensus             AAGCAAAGGAGAGAGTTCATGAAATTAAGCCCTCACCTCCAATTTAAGCTTTTTATAAAA
 
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rJMSF051J02+          AAGAAAAAAGGAAAGAAAGAAAAGGGATAAAGAAAAAGAGAGTACAGTTTGATTGAAGCA
rJMFF028L16+          AAGAAAAAAGGAAAGAAAGAAAAGGGATAAAGAAAAAGAGAGTACAGTTTGATTGAAGCA
rJMFF001E22+          AAGAAAAAAGGAAAGAAAGAAAAGGGATAAAGAAAAAGAGAGTACAGTTTGATTGAAGCA
                      ____________________________________________________________
consensus             AAGAAAAAAGGAAAGAAAGAAAAGGGATAAAGAAAAAGAGAGTACAGTTTGATTGAAGCA
 
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rJMSF051J02+          AAACATTCAGCATGAGTCCCATAATTGTGCGGCATAAATGTGTATGCTGTGTTTTGGATT
rJMFF028L16+          AAACATTCAGCATGAGTCCCATAATTGTGCGGCATAAATGTGTATGCTGTGTTTTGGATT
rJMFF001E22+          AAACATTCAGCATGAGTCCCATAATTGTGCGGCATAAATGTGTATGCTGTGTTTTGGATT
                      ____________________________________________________________
consensus             AAACATTCAGCATGAGTCCCATAATTGTGCGGCATAAATGTGTATGCTGTGTTTTGGATT
 
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rJMSF051J02+          TTTTTCTGGTG                                                 
rJMFF028L16+          TTTTTCTGGTGTGGTACTGGTACTGTAAAATCTTGAATTTACAAGGAAAGAAAATA    
rJMFF001E22+          TTTTTCTGGTGTGGTACTGGTACTGTAAAATC-TGAATTTACAAGGAAAGAAAATAACAT
                      ____________________________________________________________
consensus             TTTTTCTGGTGTGGTACTGGTACTGTAAAATCTTGAATTTACAAGGAAAGAAAATAACAT