Contig 010951:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN020I13Sequence559010951 (2)ref|XP_006367135.1|8e-28PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 9-like [Solanum tuberosum]
JMSF053C13Sequence697010951 (2)ref|XP_006367135.1|3e-11PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 9-like [Solanum tuberosum]891012802 (3)ref|XP_009606498.1|3e-108PREDICTED: scarecrow-like protein 14 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF053C13+ AACCCAGAAAATAGCAGAAGAAGGAGGAGGAAAACGA
                      ____________________________________________________________
consensus AACCCAGAAAATAGCAGAAGAAGGAGGAGGAAAACGA
 
. : . : . : . : . : . :
JMSF053C13+ GACAGGCTAAGAACTAAAGTCAAAACAAAGGCGCCCGCAGTAGCTGTATTTATAAAGGCG
                      ____________________________________________________________
consensus GACAGGCTAAGAACTAAAGTCAAAACAAAGGCGCCCGCAGTAGCTGTATTTATAAAGGCG
 
. : . : . : . : . : . :
JMSF053C13+ CAGGAAAAAGTGCAAGAAGGAGTTGAAGATTCAGAAAAACCAATAAGAGAAGGAAGAGTA
                      ____________________________________________________________
consensus CAGGAAAAAGTGCAAGAAGGAGTTGAAGATTCAGAAAAACCAATAAGAGAAGGAAGAGTA
 
. : . : . : . : . : . :
JMFN020I13+ AGCTCTGCACTTGTATTTGCATCCTTTGCATT
JMSF053C13+ GCGAGCAAGAAGGTGTGAACGGCGGTGTAGCTCTGCACTTGTATTTGCATCCTTTGCATT
                      ____________________________________________________________
consensus GCGAGCAAGAAGGTGTGAACGGCGGTGTAGCTCTGCACTTGTATTTGCATCCTTTGCATT
 
. : . : . : . : . : . :
JMFN020I13+ CATTGTAGGTGCAGGTTGGTGCCACTGACCCTATCATCAATCGTCTCGGGTTCTTGGGAA
JMSF053C13+ CATTGTAGGTGCAGGTTGGTGCCACTGACCCTATCATCAATCGTCTCGGGTTCTTGGGAA
                      ____________________________________________________________
consensus CATTGTAGGTGCAGGTTGGTGCCACTGACCCTATCATCAATCGTCTCGGGTTCTTGGGAA
 
. : . : . : . : . : . :
JMFN020I13+ AACCCGTAGACCATTGAAACACATTCAGCGATTTACTTCCTTCACCCAGACTTCTGGGTT
JMSF053C13+ AACCCGTAGACCATTGAAACACATTCAGCGATTTACTTCCTTCACCCAGACTTCTGGGTT
                      ____________________________________________________________
consensus AACCCGTAGACCATTGAAACACATTCAGCGATTTACTTCCTTCACCCAGACTTCTGGGTT
 
. : . : . : . : . : . :
JMFN020I13+ GGGATAAGTCGGGACTCTTTGGATTCGGGTTCAGTACTTCTAATCTTCTTGGGTTCTTGG
JMSF053C13+ GGGATAAGTCGGGACTCTTTGGATTCGGGTTCAGTACTTCTAATCTTCTTGGGTTCTTGG
                      ____________________________________________________________
consensus GGGATAAGTCGGGACTCTTTGGATTCGGGTTCAGTACTTCTAATCTTCTTGGGTTCTTGG
 
. : . : . : . : . : . :
JMFN020I13+ AAAAACTGATAGACCGTTGAAACACGTCCAACAATTTATCTCTTACACCAACACTTCTGG
JMSF053C13+ AAAAACTGATAGACCGTTGAAACACGTCCAACAATTTATCTCTTACACCAACACTTCTGG
                      ____________________________________________________________
consensus AAAAACTGATAGACCGTTGAAACACGTCCAACAATTTATCTCTTACACCAACACTTCTGG
 
. : . : . : . : . : . :
JMFN020I13+ GTTGGGACAGGTCGGGACTCTCGGGATTCGGTACTAATCTTCTTGTGTTCTTGTCCACCC
JMSF053C13+ GTTGGGACAGGTCGGGACTCTCGGGATTCGGTACTAATCTTCTTGTGTTCTTGTCCACCC
                      ____________________________________________________________
consensus GTTGGGACAGGTCGGGACTCTCGGGATTCGGTACTAATCTTCTTGTGTTCTTGTCCACCC
 
. : . : . : . : . : . :
JMFN020I13+ ATCTCCTTCCACCACCCTGTGAGTGGGATTCTCTTCTGGATGGAACAATCAATGGAGTTC
JMSF053C13+ ATCTCCTTCCACCACCCTGTGAGTGGGATTCTCTTCTGGATGGAACAATCAATGGAGTTC
                      ____________________________________________________________
consensus ATCTCCTTCCACCACCCTGTGAGTGGGATTCTCTTCTGGATGGAACAATCAATGGAGTTC
 
. : . : . : . : . : . :
JMFN020I13+ TTGAGCTCTCAGCGGCGCCTTGAATGAGATGATGAGAAGCAAGAATGAGGAGGAGGAAGA
JMSF053C13+ TTGAGCTCTCAGCGGCGCCTTGAATGAGATGATGAGAAGCAAGAATGAGGAGGAGGAAGA
                      ____________________________________________________________
consensus TTGAGCTCTCAGCGGCGCCTTGAATGAGATGATGAGAAGCAAGAATGAGGAGGAGGAAGA
 
. : . : . : . : . : . :
JMFN020I13+ AGACGAGCAGGAGAGAGGAGTGGAGGCGGCTAACGTTGTTG
JMSF053C13+ AGACGAGCAGGAGAGAGGAGTGGAGGCGGCTAACGTTGTTGGCCATTGCTCAACTTAACC
                      ____________________________________________________________
consensus AGACGAGCAGGAGAGAGGAGTGGAGGCGGCTAACGTTGTTGGCCATTGCTCAACTTAACC