| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012I16 | Sequence | 616 | 010949 (8) | ref|XP_004245963.1| | 2e-41 | PREDICTED: uncharacterized membrane protein At4g09580 [Solanum lycopersicum] | 761 | 010949 (8) | gb|KJB24457.1| | 1e-101 | hypothetical protein B456_004G183800 [Gossypium raimondii] |
| JMFN009P19 | Sequence | 624 | 010949 (8) | ref|XP_004245963.1| | 7e-46 | PREDICTED: uncharacterized membrane protein At4g09580 [Solanum lycopersicum] | |||||
| JMFN011A08 | Sequence | 415 | 010949 (8) | ||||||||
| JMFN039H21 | Sequence | 639 | 010949 (8) | ref|XP_010240889.1| | 1e-68 | PREDICTED: uncharacterized membrane protein At4g09580-like [Nelumbo nucifera] | |||||
| JMFS074D04 | Sequence | 626 | 010949 (8) | ref|XP_006352879.1| | 2e-39 | PREDICTED: uncharacterized membrane protein At4g09580-like [Solanum tuberosum] | |||||
| JMSF052M04 | Sequence | 536 | 010949 (8) | ref|XP_006352879.1| | 5e-10 | PREDICTED: uncharacterized membrane protein At4g09580-like [Solanum tuberosum] | 894 | 010949 (8) | gb|KJB24457.1| | 2e-128 | hypothetical protein B456_004G183800 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
JMFN011A08- AGGGAGAGAGAGAACTAGTCTCGAGXX
____________________________________________________________
consensus AGGGAGAGAGAGAACTAGTCTCGAGNN
. : . : . : . : . : . :
JMFN011A08- XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAATGCCTAAGCAATAAGCATATTTACTT
____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATGCCTAAGCAATAAGCATATTTACTT
. : . : . : . : . : . :
JMFN011A08- CCCATGAATGAATCATAAACTTGCATTTGGAGCGCAGGTTCAGCTTCTTATAAATCATAA
rJMFF012I16- TTTGGAGCGCAGGTTCAGCTTCTTATAAATCATAA
rJMSF052M04- TAAACTTGCATTTGGAGCGCAGGTTCAGCTTCTTATAAATCATAA
____________________________________________________________
consensus CCCATGAATGAATCATAAACTTGCATTTGGAGCGCAGGTTCAGCTTCTTATAAATCATAA
. : . : . : . : . : . :
JMFN011A08- ACACATTTCCCAGTTTGAGAGCTTATCTGAGAGATCGTTAACTACTAACTTCTAAAACCC
rJMFF012I16- ACACATTTCCCAGTTTGAGAGCTTATCTGAGAGATCGTTAACTACTAACTTCTAAAACCC
rJMSF052M04- ACACATTTCCCAGTTTGAGAGCTTATCTGAGAGATCGTTAACTACTAACTTCTAAAACCC
____________________________________________________________
consensus ACACATTTCCCAGTTTGAGAGCTTATCTGAGAGATCGTTAACTACTAACTTCTAAAACCC
. : . : . : . : . : . :
JMFN011A08- AATGCACAATTGCATCTGTTCCATGGGGTAATCTGTACAGATATGAAACCATCCCAGTAT
rJMFF012I16- AATGCACAATTGCATCTGTTCCATGGGGTAATCTGTACAGATATGAAACCATCCCAGTAT
rJMSF052M04- AATGCACAATTGCATCTGTTCCATGGGGTAATCTGTACAGATATGAAACCATCCCAGTAT
____________________________________________________________
consensus AATGCACAATTGCATCTGTTCCATGGGGTAATCTGTACAGATATGAAACCATCCCAGTAT
. : . : . : . : . : . :
JMFN011A08- GTATCGTTCACTGGCTCGCTCGATGAAACTACGCAAATGTCCATAGGACAGCAGAGCTCG
rJMFF012I16- GTATCGTTCACTGGCTCGCTCGATGAAACTACGCAAATGTCCATAGGACAGCAGAGCTCG
rJMSF052M04- GTATCGTTCACTGGCTCGCTCGATGAAACTACGCAAATGTCCATAGGACAGCAGAGCTCG
____________________________________________________________
consensus GTATCGTTCACTGGCTCGCTCGATGAAACTACGCAAATGTCCATAGGACAGCAGAGCTCG
. : . : . : . : . : . :
JMFN011A08- TCGACTTTTCAGCTAACACAATACACTATGATTTGCTATTGCTGGCTATCAACGTGGGGG
rJMFF012I16- TCGACTTTTCAGCTAACACAATACACTATGATTTGCTATTGCTGGCTATCAACGTGGGGG
rJMSF052M04- TCGACTTTTCAGCTAACACAATACACTATGATTTGCTATTGCTGGCTATCAACGTGGGGG
____________________________________________________________
consensus TCGACTTTTCAGCTAACACAATACACTATGATTTGCTATTGCTGGCTATCAACGTGGGGG
. : . : . : . : . : . :
JMFN011A08- TAATGCTGACCGCTCCTATGACAAACAG
rJMFF012I16- TAATGCTGACCGCTCCTATGACAAACAGCGTGGCTATAGAGTTGAAGTCGTATAGGTCGC
rJMSF052M04- TAATGCTGACCGCTCCTATGACAAACAGCGTGGCTATAGAGTTGAAGTCGTATAGGTCGC
____________________________________________________________
consensus TAATGCTGACCGCTCCTATGACAAACAGCGTGGCTATAGAGTTGAAGTCGTATAGGTCGC
. : . : . : . : . : . :
rJMFF012I16- CCAATGACTGCAACTCACTCAGCGCGATTCCAGCCCGGACAGTAACATAAGTGGCAGGAA
rJMSF052M04- CCAATGACTGCAACTCACTCAGCGCGATTCCAGCCCGGACAGTAACATAAGTGGCAGGAA
____________________________________________________________
consensus CCAATGACTGCAACTCACTCAGCGCGATTCCAGCCCGGACAGTAACATAAGTGGCAGGAA
. : . : . : . : . : . :
rJMFF012I16- TAAGCCCAATAAGTGTTGCCAGCAAGAAAATATGGTAAGGCACATCTACGATCGGTGAAG
rJMSF052M04- TAAGCCCAATAAGTGTTGCCAGCAAGAAAATATGGTAAGGCACATCTACGATCGGTGAAG
____________________________________________________________
consensus TAAGCCCAATAAGTGTTGCCAGCAAGAAAATATGGTAAGGCACATCTACGATCGGTGAAG
. : . : . : . : . : . :
rJMFF012I16- CAACATTAATAAACGTGTTTGGGAGTGTTGGCGTAACTCTTAGGAATAGCATGTAGTTCA
rJMSF052M04- CAACATTAATAAACGTGTTTGGGAGTGTTGGCGTAACTCTTAGGAATAGCATGTAGTTCA
____________________________________________________________
consensus CAACATTAATAAACGTGTTTGGGAGTGTTGGCGTAACTCTTAGGAATAGCATGTAGTTCA
. : . : . : . : . : . :
rJMFF012I16- GCAGCCGTTTCCTTCGTTTAGCCACCTGGTTCTGGAAGAACGTCAACTTATCTGGCCAGA
rJMSF052M04- GCAGCCGTTTCCTTCGTTTAGCCACCTGGTTCTGGAAGAACGTCAACTTATCTGGCCAGA
____________________________________________________________
consensus GCAGCCGTTTCCTTCGTTTAGCCACCTGGTTCTGGAAGAACGTCAACTTATCTGGCCAGA
. : . : . : . : . : . :
rJMFF012I16- GGGAGAAAACAAGGGGCCGCCCAATATGTTTGGATAAGAAATAGCAAGATGAAGCACCGG
rJMSF052M04- GGGAGAAAACAAGGGGCCGCCCAATATGTTTGGATAAGAAATAGCAAGATGAAGCACCGG
JMFN039H21+ GGGGCCGCCCAATATGTTGNGATAAGAAATAGCAAGATGAAGCACCGG
____________________________________________________________
consensus GGGAGAAAACAAGGGGCCGCCCAATATGTTTGGATAAGAAATAGCAAGATGAAGCACCGG
. : . : . : . : . : . :
rJMFF012I16- CAGTAGCAGCAAACACGACCAGAGCTACACCCTTCAGGACCCCAAAGAGAGCACCCGCAA
rJMSF052M04- CAGTAGCAGCAAACACGACCAGAGCTACACCCTTCAGGACCCCAAAGAGAGCACCCGCAA
JMFN039H21+ CAGTAGCAGCAAACACGACCAGAGCTACACCCTTCAGGACCCCAAAGAGAGCACCCGCAA
JMFN009P19+ GCAA
____________________________________________________________
consensus CAGTAGCAGCAAACACGACCAGAGCTACACCCTTCAGGACCCCAAAGAGAGCACCCGCAA
. : . : . : . : . : . :
rJMFF012I16- GTAAAGACATGAAAATAGTCCCGGGGATCATAAACGTCTGCATAAAAATGTAGACTACAC
rJMSF052M04- GTAAAGACATGAAAATAGTCCCGGGGATCATAAACGTCTGCATAAAAATGTAGACTACAC
JMFN039H21+ GTAAAGACATGAAAATAGTCCCGGGGATCATAAACGTCTGCATAAAAATGTAGACTACAC
JMFN009P19+ GTAAAGACATGAAAATAGTCCCGGGGATCATAAACGTCTGCATAAAAATGTAGACTACAC
JMFF012I16+ CCCGGGGATCATAAACGTCTGCATAAAAATGTAGACTACAC
JMFS074D04+ GGGATCATAAACGTCTGCATAAAAATGTAGACTACAC
____________________________________________________________
consensus GTAAAGACATGAAAATAGTCCCGGGGATCATAAACGTCTGCATAAAAATGTAGACTACAC
. : . : . : . : . : . :
rJMFF012I16- AGTAGC
rJMSF052M04- AGTAGCCAACAAGGACCTGCAAAGTGTAGTCGCTCGTATAACTCCCCAGTTGATCCCTTA
JMFN039H21+ AGTAGCCAACAAGGACCTGCAAAGTGTAGTCGCTCGTATAACTCCCCAGTTGATCCCTTA
JMFN009P19+ AGTAGCCAACAAGGACCTGCAAAGTGTAGTCGCTCGTATAACTCCCCAGTTGATCCCTTA
JMFF012I16+ AGTAGCCAACAAGGACCTGCAAAGTGTAGTCGCTCGTATAACTCCCCAGTTGATCCCTTA
JMFS074D04+ AGTAGCCAACAAGGACCTGCAAAGTGTAGTCGCTCGTATAACTCCCCAGTTGATCCCTTA
____________________________________________________________
consensus AGTAGCCAACAAGGACCTGCAAAGTGTAGTCGCTCGTATAACTCCCCAGTTGATCCCTTA
. : . : . : . : . : . :
rJMSF052M04- ACATTTGGATGTCTTCAAGAGTTCTCGGAAGCTTGAGGAAGCTGTAATCGGAAGCCGGCA
JMFN039H21+ ACATTTGGATGTCTTCAAGAGTTCTCGGAAGCTTGAGGAAGCTGTAATCGGAAGCCGGCA
JMFN009P19+ ACATTTGGATGTCTTCAAGAGTTCTCGGAAGCTTGAGGAAGCTGTAATCGGAAGCCGGCA
JMFF012I16+ ACATTTGGATGTCTTCAAGAGTTCTCGGAAGCTTGAGGAAGCTGTAATCGGAAGCCGGCA
JMFS074D04+ ACATTTGGATGTCTTCAAGAGTTCTCGGAAGCTTGAGGAAGCTGTAATCGGAAGCCGGCA
JMSF052M04+ TTGGATGTCTTCAAGAGTTCTCGGAAGCTTGAGGAAGCTGTAATCGGAAGCCGGCA
____________________________________________________________
consensus ACATTTGGATGTCTTCAAGAGTTCTCGGAAGCTTGAGGAAGCTGTAATCGGAAGCCGGCA
. : . : . : . : . : . :
rJMSF052M04- TGGTGAAAT
JMFN039H21+ TGGTGAAATACACGCCGAGCAGCCCGGATGCGAAGCCCAAAACGACGCCGCTCGCCACCG
JMFN009P19+ TGGTGAAATACACGCCGAGCAGCCCGGATGCGAAGCCCAAAACGACGCCGCTCGCCACCG
JMFF012I16+ TGGTGAAATACACGCCGAGCAGCCCGGATGCGAAGCCCAAAACGACGCCGCTCGCCACCG
JMFS074D04+ TGGTGAAATACACGCCGAGCAGCCCGGATGCGAAGCCCAAAACGACGCCGCTCGCCACCG
JMSF052M04+ NGGTGAAATACACGCCGAGCANCCCGGATGNGAAGCCCAAAAAGACGCCGCTCGCCACCG
____________________________________________________________
consensus TGGTGAAATACACGCCGAGCAGCCCGGATGCGAAGCCCAAAACGACGCCGCTCGCCACCG
. : . : . : . : . : . :
JMFN039H21+ CAATCTCCCAAAAGGTCAGCGGGAACTTAGCCGATCTCGAGCTGTTTACAGCACTGCCCT
JMFN009P19+ CAATCTCCCAAAAGGTCAGCGGGAACTTAGCCGATCTCGAGCTGTTTACAGCACTGCCCT
JMFF012I16+ CAATCTCCCAAAAGGTCAGCGGGAACTTAGCCGATCTCGAGCTGTTTACAGCACTGCCCT
JMFS074D04+ CAATCTCCCAAAAGGTCAGCGGGAACTTAGCCGATCTCGAGCTGTTTACAGCACTGCCCT
JMSF052M04+ CAATCTCNCAAAAGGTCAGCGGGAACTTAGCCGATCTCGAGCTGTTTACAGCACTGCCCT
____________________________________________________________
consensus CAATCTCCCAAAAGGTCAGCGGGAACTTAGCCGATCTCGAGCTGTTTACAGCACTGCCCT
. : . : . : . : . : . :
JMFN039H21+ TGCCTCCCCCATTCCTCCGCCCATCAAACCCACATCTCGGAGCGGCGGCCTCTGAAGTTT
JMFN009P19+ TGCCTCCCCCATTCCTCCGCCCATCAAACCCACATCTCGGAGCGGCGGCCTCTGAAGTTT
JMFF012I16+ TGCCTCCCCCATTCCTCCGCCCATCAAACCCACATCTCGGAGCGGCGGCCTCTGAAGTTT
JMFS074D04+ TGCCTCCCCCATTCCTCCGCCCATCAAACCCACATCTCGGAGCGGCGGCCTCTGAAGTTT
JMSF052M04+ TGCCTCCCCCATTCTTCCGCCCATCAAACCCACATNTCGGAGCGGCGGCCTCTGAAGTTT
____________________________________________________________
consensus TGCCTCCCCCATTCCTCCGCCCATCAAACCCACATCTCGGAGCGGCGGCCTCTGAAGTTT
. : . : . : . : . : . :
JMFN039H21+ CAGACGCCGACGACGACGATGTTCCGACCACCTCTCCCTCCATCAACTAAATCCAATTAT
JMFN009P19+ CAGACGCCGACGACGACGATGTTCCGACCACCTCTCCCTCCATCAACTAAATCCAATTAT
JMFF012I16+ CAGACGCCGACGACGACGATGTTACGACCACCTCTCCCTCCATCAACTAAATCCAATTAT
JMFS074D04+ CAGACGCCGACGACGACGATGTTCCGACCACCTCTCCCTCCATCAACTAAATCCAATTAT
JMSF052M04+ CAGACGCCGACGACGACGATGTTCNGACCACCTCTCCCTCCATCAACTAAATCCAATTAT
____________________________________________________________
consensus CAGACGCCGACGACGACGATGTTCCGACCACCTCTCCCTCCATCAACTAAATCCAATTAT
. : . : . : . : . : . :
JMFN039H21+ CCAAAGATTTATTGCCGAAAAGAAATGCTTTTCTTGAGAAGATTGAAGCCCAAAGAGAAA
JMFN009P19+ CCAAAGATTTATTGCCGAAAAGAAATGCTTTTCTTGAGAAGATTGAAGCCCAAAGAGAAA
JMFF012I16+ CCAAAGATTTATTGCCGAAAAGAAATGCTTTTCTTGAGAAGATTGAAGCCCAAAGAGAAA
JMFS074D04+ CCAAAGATTTATTGCCGAAAAGAAATGCTTTTCTTGAGAAGATTGAAGCCCAAAGAGAAA
JMSF052M04+ CCAAAGATTTATTGCCGAAAAGAAATGCTTTTCTTGAGAAGANTGAAGCCCAAAGAGAAA
____________________________________________________________
consensus CCAAAGATTTATTGCCGAAAAGAAATGCTTTTCTTGAGAAGATTGAAGCCCAAAGAGAAA
. : . : . : . : . : . :
JMFN039H21+ AATGGGATAGGTTTCAAAAAGCATACATTTAGATTGACGCGTATGTTTAGA
JMFN009P19+ AATGGGATAGGTTTCAAAAAGCATACATTTAGATTGACGCGTATGTTTAGAGAGAGAAGA
JMFF012I16+ AATGGGATAGGTTTCAAAAAGCATACATTTAGATTGACGCGTATGTTTAGAGAGAGAAGA
JMFS074D04+ AATGGGATAGGTTTCAAAAAGCATACATTTAGATTGACGCGTATGTTTAGAGAGAGAAGA
JMSF052M04+ AATGGGATAGGTTTCAAAAAGCANACANTTAGATTGACGCGTATGTTTAGAGAGAGAAGA
____________________________________________________________
consensus AATGGGATAGGTTTCAAAAAGCATACATTTAGATTGACGCGTATGTTTAGAGAGAGAAGA
. : . : . : . : . : . :
JMFN009P19+ GGGGAGGGGAGGGGAAGAGAGAGAAGAGGGGAGGGGAAGAAAGAGAAATTGGGGGGGTTC
JMFF012I16+ GGGGAGGGGAGGGGAAGAGAGGGAAGAGGGGAGGGGAAGAAAGAGAAATTGGGGGGGTTC
JMFS074D04+ GGGGAGGGGAGGGGAAGAGAGAGAAGAGGGGAGGGGAAGAAAGAGAAATTGGGGGGGTTC
JMSF052M04+ GGGGAGGGGAGGGGAAGAGAGAGAAGAGGGGAGGGGAAGAAAGAGAAATTGGGGGGGTTC
____________________________________________________________
consensus GGGGAGGGGAGGGGAAGAGAGAGAAGAGGGGAGGGGAAGAAAGAGAAATTGGGGGGGTTC
. : . : . : . : . : . :
JMFN009P19+ TTTCTTTGGGTGCACTCT
JMFF012I16+ TTTCTTTGGGTGCACTCTTGCTTTCGCTCTCTCTC
JMFS074D04+ TTTCTTTGGGTGCACTCTTGCTTTCGCTCTCTCTCTCTCTCTCTCTCTC
JMSF052M04+ TTTCTTTGGGNGCACTCTNGCTTTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGC
____________________________________________________________
consensus TTTCTTTGGGTGCACTCTTGCTTTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGC