Contig 010948:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF044H06-                                                     GGTATTTTTCTATGTGA
rJMSF052L05-                                                     GGTATTTTTCTATGTGA
                      ____________________________________________________________
consensus                                                        GGTATTTTTCTATGTGA
 
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rJMSF044H06-          GAGGAAATATTACAATTCAGCCTGCACGAATTACGTATTACACATCAACAGGCCATTCAA
rJMSF052L05-          GAGGAAATATTACAATTCAGCCTGCACGAATTACGTATTACACATCAACAGGCCATTCAA
                      ____________________________________________________________
consensus             GAGGAAATATTACAATTCAGCCTGCACGAATTACGTATTACACATCAACAGGCCATTCAA
 
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rJMSF044H06-          ACCTCAAAAAATTGAGGATATCATTACAAAAAAATTGAGCCAACGCTGATCATGCACATC
rJMSF052L05-          ACCTCAAAAAATTGAGGATATCATTACAAAAAAATTGAGCCAACGCTGATCATGCACATC
                      ____________________________________________________________
consensus             ACCTCAAAAAATTGAGGATATCATTACAAAAAAATTGAGCCAACGCTGATCATGCACATC
 
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rJMSF044H06-          CAGGGCAAAATAATAGTGTGTAATCTTGACAATTATCGGCACCCAACATACTTGTAGTCA
rJMSF052L05-          CAGGGCAAAATAATAGTGTGTAATCTTGACAATTATCGGCACCCAACATACTTGTAGTCA
                      ____________________________________________________________
consensus             CAGGGCAAAATAATAGTGTGTAATCTTGACAATTATCGGCACCCAACATACTTGTAGTCA
 
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rJMSF044H06-          AAGACAACCCAACCCAACCCGATAGGACCTGTGAATCTTGGTTTTGTTAGCTGTAACAAT
rJMSF052L05-          AAGACAACCCAACCCAACCCGATAGGACCTGTGAATCTTGGTTTTGTTAGCTGTAACAAT
                      ____________________________________________________________
consensus             AAGACAACCCAACCCAACCCGATAGGACCTGTGAATCTTGGTTTTGTTAGCTGTAACAAT
 
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rJMSF044H06-          TTTGGGAGGATTAGCACCGACTTGGGGAGAATCAGCTATTTTACTTGCATTTACGTCTGC
rJMSF052L05-          TTTGGGAGGATTAGCACCGACTTGGGGAGAATCAGCTATTTTACTTGCATTTACGTCTGC
                      ____________________________________________________________
consensus             TTTGGGAGGATTAGCACCGACTTGGGGAGAATCAGCTATTTTACTTGCATTTACGTCTGC
 
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rJMSF044H06-          ATCTTGGTTTGCACTTGATTCACCAGATTCAACAATGAACTGAAGCCCCTTTACTGAATT
rJMSF052L05-          ATCTTGGTTTGCACTTGATTCACCAGATTCAACAATGAACTGAAGCCCCTTTACTGAATT
                      ____________________________________________________________
consensus             ATCTTGGTTTGCACTTGATTCACCAGATTCAACAATGAACTGAAGCCCCTTTACTGAATT
 
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rJMSF044H06-          TTCTATAGGTAACAATTTTGAATGCTGTATTAACTTAGCACCAACATCCTCAATAAGCTT
rJMSF052L05-          TTCTATAGGTAACAATTTTGAATGCTGTATTAACTTAGCACCAACATCCTCAATAAGCTT
JMSF044H06+             CTATAGGTAACAATTTTGAATGCTGTATTAACTTAGCACCAACATCCTCAATAAGCTT
                      ____________________________________________________________
consensus             TTCTATAGGTAACAATTTTGAATGCTGTATTAACTTAGCACCAACATCCTCAATAAGCTT
 
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rJMSF044H06-          AGCATTCTGACCACTTTCAATCTCCCCAGCCACTTGGCACAAATACCACACACCAGAATT
rJMSF052L05-          AGCATTCTGACCACTTTCAATCTCCCCAGCCACTTGGCACAAATACCACACACCAGAATT
JMSF044H06+           AGCATTCTGACCACTTTCAATCTCCCCAGCCACTTGGCACAAATACCACACACCAGAATT
JMSF052L05+                                                                CAGAATT
                      ____________________________________________________________
consensus             AGCATTCTGACCACTTTCAATCTCCCCAGCCACTTGGCACAAATACCACACACCAGAATT
 
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rJMSF044H06-          AGTGATATCCTGGTTATTCTCAAGAAGTTCAATTTTGCCTTCCAATCCAGACACCATCTG
rJMSF052L05-          AGTGATATCCTGGTTATTCTCAAGAAGTTCAATTTTGCCTTCCAATCCAGACACCATCTG
JMSF044H06+           AGTGATATCCTGGTTATTCTCAAGAAGTTCAATTTTGCCTTCCAATCCAGACACCATCTG
JMSF052L05+           AGTGATATCCTGGTTATTCTCAAGAAGTTCAATTTTGCCTTCCAATCCAGACACCATCTG
                      ____________________________________________________________
consensus             AGTGATATCCTGGTTATTCTCAAGAAGTTCAATTTTGCCTTCCAATCCAGACACCATCTG
 
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rJMSF044H06-          ATGAATTAAGTCAATGTCGTATCCAATTTGATTTAGATTTGACTTTACTTCCTTTACATC
rJMSF052L05-          ATGAATTAAGTCAATGTCGTATCCAATTTGATTTAGATTTGACTTTACTTCCTTTACATC
JMSF044H06+           ATGAATTAAGTCAATGTCGTATCCAATTTGATTTAGATTTGACTTTACTTCCTTTACATC
JMSF052L05+           ATGAATTAAGTCAATGTCGTATCCAATTTGATTTAGATTTGACTTTACTTCCTTTACATC
                      ____________________________________________________________
consensus             ATGAATTAAGTCAATGTCGTATCCAATTTGATTTAGATTTGACTTTACTTCCTTTACATC
 
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rJMSF044H06-          ATTTGCAATAAGCGTTGACATCTCCTTCTGCTCATCCAGCTTCCAATCCAAGTTTTCAAG
rJMSF052L05-          ATTTGCAATAAGCGTTGACATCTCCTTCTGCTCATCCAGCTTCCAATCCAAGTTTTCAAG
JMSF044H06+           ATTTGCAATAAGCGTTGACATCTCCTTCTGCTCATCCAGCTTCCAATCCAAGTTTTCAAG
JMSF052L05+           ATTTGCAATAAGCGTTGACATCTCCTTCTGCTCATCCAGCTTCCAATCCAAGTTTTCAAG
                      ____________________________________________________________
consensus             ATTTGCAATAAGCGTTGACATCTCCTTCTGCTCATCCAGCTTCCAATCCAAGTTTTCAAG
 
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rJMSF044H06-          CCTTTTTGACAGATGCCTCTTTGTAGAAGCCAATGCATCAGATACATTCTCTAACTGCTT
rJMSF052L05-          CCTTTTTGACAGATGCCTCTTTGTAGAAGCCAATGCATCAGATACATTCTCTAACTGCTT
JMSF044H06+           CCTTTTTGACAGATGCCTCTTTGTAGAAGCCAATGCATCAGATACATTCTCTAACTGCTT
JMSF052L05+           CCTTTTTGACAGATGCCTCTTTGTAGAAGCCAATGCATCAGATACATTCTCTAACTGCTT
                      ____________________________________________________________
consensus             CCTTTTTGACAGATGCCTCTTTGTAGAAGCCAATGCATCAGATACATTCTCTAACTGCTT
 
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rJMSF044H06-          TGAGACAGAAGCAACAGCATTTGCCATATTACTCTTTGTAACAAACATAACATCTGAGA 
rJMSF052L05-          TGAGACAGAAGCAACAGCATTTGCCATATTACTCTTTGTAACAAACATAACATCTGAGAA
JMSF044H06+           TGAGACAGAAGCAACAGCATTTGCCATATTACTCTTTGTAACAAACATAACATCTGAGAA
JMSF052L05+           TGAGACAGAAGCAACAGCATTTGCCATATTACTCTTTGTAACAAACATAACATCTGAGAA
                      ____________________________________________________________
consensus             TGAGACAGAAGCAACAGCATTTGCCATATTACTCTTTGTAACAAACATAACATCTGAGAA
 
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rJMSF052L05-          TGACCAACCCTTCCACTTCATGTAACAATATCCCACTGCTCCAATTGCAGCAGCCGGA  
JMSF044H06+           TGACCAACCCTTCCACTTCATGTAACAATATCCCACTGCTCCAATTGCAGCAGCCGGAAG
JMSF052L05+           TGACCAACCCTTCCACTTCATGTAACAATATCCCACTGCTCCAATTGCAGCAGCCGGAAG
                      ____________________________________________________________
consensus             TGACCAACCCTTCCACTTCATGTAACAATATCCCACTGCTCCAATTGCAGCAGCCGGAAG
 
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JMSF044H06+           AAGGTAAGAAGCATAACTCCTATCGGAAGAACCACTGTTGAAGATGGTTGCTGGACTTGT
JMSF052L05+           AAGGTAAGAAGCATAACTCCTATCGGAAGAACCACTGTTGAAGATGGTTGCTGGACTTGT
                      ____________________________________________________________
consensus             AAGGTAAGAAGCATAACTCCTATCGGAAGAACCACTGTTGAAGATGGTTGCTGGACTTGT
 
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JMSF044H06+           GATACTTATCTGCCTAATCTCTTGTGCCAACTGTCGAATCTGAGCAGCTAGAAGAGCAGC
JMSF052L05+           GATACTTATCTGCCTAATCTCTTGTGCCAACTGTCGAATCTGAGCAGCTAGAAGAGCAGC
                      ____________________________________________________________
consensus             GATACTTATCTGCCTAATCTCTTGTGCCAACTGTCGAATCTGAGCAGCTAGAAGAGCAGC
 
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JMSF044H06+           ATCATATTTCCCAGGTGATGTTTCGGCCTCATTTACACCTTTAATCAACTCCTGAAGCTG
JMSF052L05+           ATCATATTTCCCAGGTGATGTTTCGGCCTCATTTACACCTTTAATCAACTCCTGAAGCTG
                      ____________________________________________________________
consensus             ATCATATTTCCCAGGTGATGTTTCGGCCTCATTTACACCTTTAATCAACTCCTGAAGCTG
 
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JMSF044H06+           TGAAATTAAATCAGACAATCGTCCACTCCTTAATACTATTGACCCAGTCAAGCCTGCGCC
JMSF052L05+           TGAAATTAAATCAGACAATCGTCCACTCCTTAATACTATTGACCCAGTCAAGCCTGCGCC
                      ____________________________________________________________
consensus             TGAAATTAAATCAGACAATCGTCCACTCCTTAATACTATTGACCCAGTCAAGCCTGCGCC
 
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JMSF044H06+           GACCAATACGAGAACTTTGGAGGCAGCGACACCGGTCTGCATCGCCATGTCTGCGACTGC
JMSF052L05+           GACCAATACGAGAACTTTGGAGGCAGCGACACCGGTCTGCATCGCCATGTCTGCGACTGC
                      ____________________________________________________________
consensus             GACCAATACGAGAACTTTGGAGGCAGCGACACCGGTCTGCATCGCCATGTCTGCGACTGC