Contig 010947:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008L16Sequence623010947 (6)ref|XP_006357074.1|2e-77PREDICTED: conserved oligomeric Golgi complex subunit 2-like [Solanum tuberosum752020153ref|XP_007023396.1|3e-41Golgi organization, COG2 isoform 1 [Theobroma cacao] gb|EOY26018.1| Golgi organi
JMSF009G14Sequence443010947 (6)ref|XP_004244508.1|1e-55PREDICTED: conserved oligomeric Golgi complex subunit 2 [Solanum lycopersicum]756006875 (7)gb|EYU23123.1|3e-93hypothetical protein MIMGU_mgv1a001829mg [Erythranthe guttata]
JMSF026M14Sequence638010947 (6)ref|XP_009602477.1|1e-77PREDICTED: conserved oligomeric Golgi complex subunit 2 [Nicotiana tomentosifor748006875 (7)gb|EYU23123.1|3e-93hypothetical protein MIMGU_mgv1a001829mg [Erythranthe guttata]
JMSF038L09Sequence638010947 (6)ref|XP_009602477.1|1e-77PREDICTED: conserved oligomeric Golgi complex subunit 2 [Nicotiana tomentosifor925006875 (7)ref|XP_009602477.1|1e-120PREDICTED: conserved oligomeric Golgi complex subunit 2 [Nicotiana tomentosifor
JMSF048J21Sequence712010947 (6)ref|XP_006357074.1|5e-94PREDICTED: conserved oligomeric Golgi complex subunit 2-like [Solanum tuberosum685006875 (7)gb|EYU23123.1|8e-81hypothetical protein MIMGU_mgv1a001829mg [Erythranthe guttata]
JMSF052H24Sequence642010947 (6)ref|XP_004244508.1|3e-77PREDICTED: conserved oligomeric Golgi complex subunit 2 [Solanum lycopersicum]902006875 (7)gb|EYU23123.1|2e-91hypothetical protein MIMGU_mgv1a001829mg [Erythranthe guttata]

Alignment

This contig is upended


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JMSF048J21+                   CGCATGAGCTATGTAGAACTTCAGTCTATTCATCTCGCTTGCAATTCGCTCA
                      ____________________________________________________________
consensus                     CGCATGAGCTATGTAGAACTTCAGTCTATTCATCTCGCTTGCAATTCGCTCA
 
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JMSF048J21+           AGATGCATGCTTTGAGTTTCTCTCAGATTCGATCCCTTTTCAGTATGCTGAAATGAGACT
JMSF038L09+                                               TTTTCAGTATGCTGAAATGAGACT
JMFF008L16+                                               TTTTCAGTATGCTGAAATGAGACT
JMSF026M14+                                               TTTTCAGTATGCTGAAATGAGACT
JMSF052H24+                                               TTTTCAGTATGCTGAAATGAGACT
                      ____________________________________________________________
consensus             AGATGCATGCTTTGAGTTTCTCTCAGATTCGATCCCTTTTCAGTATGCTGAAATGAGACT
 
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JMSF048J21+           CCATTGCTTAAATAACCATTGTCCGCATAATTAGCTATTCCATTTGCCAAATTAGTAGCC
JMSF038L09+           CCATTGCTTAAATAACCATTGTCCGCATAATTAGCTATTCCATTTGCCAAATTAGTAGCC
JMFF008L16+           CCATTGCTTAAATAACCATTGTCCGCATAATTAGCTATTCCATTTGCCAAATTAGTAGCC
JMSF026M14+           CCATTGCTTAAATAACCATTGTCCGCATAATTAGCTATTCCATTTGCCAAATTAGTAGCC
JMSF052H24+           CCATTGCTTAAATAACCATTGTCCGCATAATTAGCTATTCCATTTGCCAAATTAGTAGCC
                      ____________________________________________________________
consensus             CCATTGCTTAAATAACCATTGTCCGCATAATTAGCTATTCCATTTGCCAAATTAGTAGCC
 
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JMSF048J21+           CCACTCGGCAATTCCTTGATCAATTTCTCCACCTTTGACACAACGTGGAAGGTATCGAGC
JMSF038L09+           CCACTCGGCAATTCCTTGATCAATTTCTCCACCTTTGACACAACGTGGAAGGTATCGAGC
JMFF008L16+           CCACTCGGCAATTCCTTGATCAATTTCTCCACCTTTGACACAACGTGGAAGGTATCGAGC
JMSF026M14+           CCACTCGGCAATTCCTTGATCAATTTCTCCACCTTTGACACAACGTGGAAGGTATCGAGC
JMSF052H24+           CCACTCGGCAATTCCTTGATCAATTTCTCCACCTTTGACACAACGTGGAAGGTATCGAGC
                      ____________________________________________________________
consensus             CCACTCGGCAATTCCTTGATCAATTTCTCCACCTTTGACACAACGTGGAAGGTATCGAGC
 
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JMSF048J21+           AAGAGCTCTAGAACTTCCCGAGCCTCACCGGCATCGGCGCGCTGCTTGAGCCGCGAGTGA
JMSF038L09+           AAGAGCTCTAGAACTTCCCGAGCCTCACCGGCATCGGCGCGCTGCTTGAGCCGCGAGTGA
JMSF009G14+                                          CATCGGCGCGCTGCTTGAGCCGCGAGTGA
JMFF008L16+           AAGAGCTCTAGAACTTCCCGAGCCTCACCGGCATCGGCGCGCTGCTTGAGCCGCGAGTGA
JMSF026M14+           AAGAGCTCTAGAACTTCCCGAGCCTCACCGGCATCGGCGCGCTGCTTGAGCCGCGAGTGA
JMSF052H24+           AAGAGCTCTAGAACTTCCCGAGCCTCACCGGCATCGGCGCGCTGCTTGAGCCGCGAGTGA
                      ____________________________________________________________
consensus             AAGAGCTCTAGAACTTCCCGAGCCTCACCGGCATCGGCGCGCTGCTTGAGCCGCGAGTGA
 
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JMSF048J21+           AGAGCGCTGAGCGAGCTCTCCACGGCTTCGCGGAAAGTGGAGATCTTGTGTCGGATCTCG
JMSF038L09+           AGAGCGCTGAGCGAGCTCTCCACGGCTTCGCGGAAAGTGGAGATCTTGTGTCGGATCTCG
JMSF009G14+           AGAGCGCTGAGCGAGCTCTCCACGGCTTCGCGGAAAGTGGAGATCTTGTGTCGGATCTCG
JMFF008L16+           AGAGCGCTGAGCGAGCTCTCCACGGCTTCGCGGAAAGTGGAGATCTTGTGTCGGATCTCG
JMSF026M14+           AGAGCGCTGAGCGAGCTCTCCACGGCTTCGCGGAAAGTGGAGATCTTGTGTCGGATCTCG
JMSF052H24+           AGAGCGCTGAGCGAGCTCTCCACGGCTTCGCGGAAAGTGGAGATCTTGTGTCGGATCTCG
                      ____________________________________________________________
consensus             AGAGCGCTGAGCGAGCTCTCCACGGCTTCGCGGAAAGTGGAGATCTTGTGTCGGATCTCG
 
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JMSF048J21+           AGCAAGGGGGCACGCATTCGGACAACGGCTGCGTCAACGTCGGTCAATTTGGTGCTGAGG
JMSF038L09+           AGCAAGGGGGCACGCATTCGGACAACGGCTGCGTCAACGTCGGTCAATTTGGTGCTGAGG
JMSF009G14+           AGCAAGGGGGCACGCATTCGGACAACGGCTGCGTCAACGTCGGTCAATTTGGTGCTGAGG
JMFF008L16+           AGCAAGGGGGCACGCATTCGGACAACGGCTGCGTCAACGTCGGTCAATTTGGTGCTGAGG
JMSF026M14+           AGCAAGGGGGCACGCATTCGGACAACGGCTGCGTCAACGTCGGTCAATTTAGTGCTGAGG
JMSF052H24+           AGCAAGGGGGCACGCATTCGGACAACGGCTGCGTCAACGTCGGTCAATTTGGTGCTGAGG
                      ____________________________________________________________
consensus             AGCAAGGGGGCACGCATTCGGACAACGGCTGCGTCAACGTCGGTCAATTTGGTGCTGAGG
 
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JMSF048J21+           CTGACGAAATCGGCATAGTCGCGGTTGATTAGGTCGACGAGGTCGCGTTGAAGAGAGGAG
JMSF038L09+           CTGACGAAATCGGCATAGTCGCGGTTGATTAGGTCGACGAGGTCGCGTTGAAGAGAGGAG
JMSF009G14+           CTGACGAAATCGGCATAGTCGCGGTTGATTAGGTCGACGAGGTCGCGTTGAAGAGAGGAG
JMFF008L16+           CTGACGAAATCGGCATAGTCGCGGTTGATTAGGTCGACGAGGTCGCGTTGAAGAGAGGAG
JMSF026M14+           CTGACGAAATCGGCATAGTCGCGGTTGATTAGGTCGACGAGGTCGCGTTGAAGAGAGGAG
JMSF052H24+           CTGACGAAATCGGCATAGTCGCGGTTGATTAGGTCGACGAGGTCGCGTTGAAGAGAGGAG
                      ____________________________________________________________
consensus             CTGACGAAATCGGCATAGTCGCGGTTGATTAGGTCGACGAGGTCGCGTTGAAGAGAGGAG
 
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JMSF048J21+           AGGTGTGACCTGAGCTCCGAACGGAGAGTGTCCAGTGGGACGAATGTGCGGAGGTCCGAA
JMSF038L09+           AGGTGTGACCTGAGCTCCGAACGGAGAGTGTCCAGTGGGACGAATGTGCGGAGGTCCGAA
JMSF009G14+           AGGTGTGACCTGAGCTCCGAACGGAGAGTGTCCAGTGGGACGAATGTGCGGAGGTCCGAA
JMFF008L16+           AGGTGTGACCTGAGCTCCGAACGGAGAGTGTCCAGTGGGACGAATGTGCGGAGGTCCGAA
JMSF026M14+           AGGTGTGACCTGAGCTCCGAACGGAGAGTGTCCAGTGGGACGAATGTGCGGAGGTCCGAA
JMSF052H24+           AGGTGTGACCTGAGCTCCGAACGGAGAGTGTCCAGTGGGACGAATGTGCGGAGGTCCGAA
                      ____________________________________________________________
consensus             AGGTGTGACCTGAGCTCCGAACGGAGAGTGTCCAGTGGGACGAATGTGCGGAGGTCCGAA
 
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JMSF048J21+           ATGTACGTCTCGGCGTCGAAGTCCTCGGAGAGGAACAGCGGAGGGTTTAGCCATTGTGGG
JMSF038L09+           ATGTACGTCTCGGCGTCGAAGTCCTCGGAGAGGAACAGCGGAGGGTTTAGCCATTGTGGG
JMSF009G14+           ATGTACGTCTCGGCGTCGAAGTCCTCGGAGAGGAACAGCGGAGGGTTTAGCCATTGTGGG
JMFF008L16+           ATGTACGTCTCGGCGTCGAAGTCCTCGGAGAGGAACAGCGGAGGGTTTAGCCATTGTGGG
JMSF026M14+           ATGTACGTCTCGGCGTCGAAGTCCTCGGAGAGGAACAGCGGAGGGTTTAGCCATTGTGGG
JMSF052H24+           ATGTACGTCTCGGCGTCGAAGTCCTCGGAGAGGAACAGCGGAGGGTTTAGCCATTGTGGG
                      ____________________________________________________________
consensus             ATGTACGTCTCGGCGTCGAAGTCCTCGGAGAGGAACAGCGGAGGGTTTAGCCATTGTGGG
 
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JMSF048J21+           GGGTTAGCGTCCGTCGGATCCCCGAAGAGGTCGGTGGCGGAGCGCGGCGGAGCTCCTGGA
JMSF038L09+           GGGTTAGCGTCCGTCGGATCCCCGAAGAGGTCGGTGGCGGAGCGCGGCGGAGCTCCTGGA
JMSF009G14+           GGGTTAGCGTCCGTCGGATCCCCGAAGAGGTCGGTGGCGGAGCGCGGCGGAGCTCCTGGA
JMFF008L16+           GGGTTAGCGTCCGTCGGATCCCCGAAGAGGTCGGTGGCGGAGCGCGGCGGAGCTCCTGGA
JMSF026M14+           GGGTTAGCGTCCGTCGGATCCCCGAAGAGGTCGGTGGCGGAGCGCGGCGGAGCTCCTGGA
JMSF052H24+           GGGTTAGCGTCCGTCGGATCCCCGAAGAGGTCGGTGGCGGAGCGCGGCGGAGCTCCTGGA
                      ____________________________________________________________
consensus             GGGTTAGCGTCCGTCGGATCCCCGAAGAGGTCGGTGGCGGAGCGCGGCGGAGCTCCTGGA
 
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JMSF048J21+           GTCGATGATCGCTGAGGAGAGTGGAGATCTGTCATTCTTTCTGCAATCGACTCAAAAGTC
JMSF038L09+           GTCGATGATCGCTGAGGAGAGTGGAGATCTGTCATTCTTTCTGCAATCGACTCAAAAGTC
JMSF009G14+           GTCGATGATCGCTGAGGAGAGTGGAGATCTGTCATTCTTTCTGCAATCGACTC       
JMFF008L16+           GTCGATGATCGCTGAGGAGAGTGGAGATCTGTCATTCTTTCTGCAATCGACTCAAAAGT 
JMSF026M14+           GTCGATGATCGCTGAGGAGAGTGGAGATCTGTCATTCTTTCTGCAATCGACTCAAAAGTC
JMSF052H24+           GTCGATGATCGCTGAGGAGAGTGGAGATCTGTCATTCTTTCTGCAATCGACTCAAAAGTC
                      ____________________________________________________________
consensus             GTCGATGATCGCTGAGGAGAGTGGAGATCTGTCATTCTTTCTGCAATCGACTCAAAAGTC