Contig 010945:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS071G09Sequence620010945 (2)emb|CDP11097.1|1e-07unnamed protein product [Coffea canephora]
JMSF052E18Sequence666010945 (2)ref|XP_009608252.1|3e-06PREDICTED: putative uncharacterized protein DDB_G0274535 isoform X1 [Nicotiana

Alignment

This contig is upended


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JMSF052E18+                                                                 AATTCA
                      ____________________________________________________________
consensus                                                                   AATTCA
 
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JMFS071G09+                                    CATAGCCACCGGATGCGCCATCACCAGTTCCAGTC
JMSF052E18+           TTAAGGGTGGGAGGTTGGTAACCACCATAGCCACCGGATGCGCCATCACCAGTTCCAGTC
                      ____________________________________________________________
consensus             TTAAGGGTGGGAGGTTGGTAACCACCATAGCCACCGGATGCGCCATCACCAGTTCCAGTC
 
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JMFS071G09+           ACACTGCTAGTACCGATGAGCATCGACTTCTCATTCCTTCTCCCTACATCCATTCTCTTG
JMSF052E18+           ACACTGCTAGTACCGATGAGCATCGACTTCTCATTCCTTCTCCCTACATCCATTCTCTTG
                      ____________________________________________________________
consensus             ACACTGCTAGTACCGATGAGCATCGACTTCTCATTCCTTCTCCCTACATCCATTCTCTTG
 
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JMFS071G09+           TCAATCTTATTCATTTTCTTACCCTTCCAATTACTCCGTGGTCGCAGTGGCTTCGATTGC
JMSF052E18+           TCAATCTTATTCATTTTCTTACCCTTCCAATTACTCCGTGGTCGCAGTGGCTTCGATTGC
                      ____________________________________________________________
consensus             TCAATCTTATTCATTTTCTTACCCTTCCAATTACTCCGTGGTCGCAGTGGCTTCGATTGC
 
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JMFS071G09+           TTCCCCATCACAAACCCCTGAGGCTTCATAGCATTAAAGCTTGGGTTTGGGAAGTTCATC
JMSF052E18+           TTCCCCATCACAAACCCCTGAGGCTTCATAGCATTAAAGCTTGGGTTTGGGAAGTTCATC
                      ____________________________________________________________
consensus             TTCCCCATCACAAACCCCTGAGGCTTCATAGCATTAAAGCTTGGGTTTGGGAAGTTCATC
 
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JMFS071G09+           TGATCCATAGCCGGAGGCGGCGGCGCCTGTGGCCACATCCCGTAGCTACGACTCATCACC
JMSF052E18+           TGATCCATAGCCGGAGGCGGCGGCGCCTGTGGCCACATCCCGTAGCTACGACTCACCACC
                      ____________________________________________________________
consensus             TGATCCATAGCCGGAGGCGGCGGCGCCTGTGGCCACATCCCGTAGCTACGACTCATCACC
 
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JMFS071G09+           GGCGGCTGCTGTAACTGCGGATGCGAATTCATCCCCATCATTTGGCTCTGACTCATACTC
JMSF052E18+           GGCGGCTGCTGTAACTGCGGATGCGAATTCATCCCCATCATTTGGCTCTGACTCATACTC
                      ____________________________________________________________
consensus             GGCGGCTGCTGTAACTGCGGATGCGAATTCATCCCCATCATTTGGCTCTGACTCATACTC
 
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JMFS071G09+           ATCATCTGCTGCTGTTGATTCATCATCGACGCAGATTGCTCATTCATCTCTCTGCAGAGA
JMSF052E18+           ATCATCTGCTGCTGTTGATTCATCATCGACGCAGATTGCTCATTCATCTCTCTGCAGAGA
                      ____________________________________________________________
consensus             ATCATCTGCTGCTGTTGATTCATCATCGACGCAGATTGCTCATTCATCTCTCTGCAGAGA
 
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JMFS071G09+           ACAAATATCAAAACCCCTAAATTTGAAAATTTAGAGAGATTTTACAGAGTTTCCGCAGCT
JMSF052E18+           ACAAATATCAAAACCCCTAAATTTGAAAATTTAGAGAGATTTTACAGAGTTTCCGCAGCT
                      ____________________________________________________________
consensus             ACAAATATCAAAACCCCTAAATTTGAAAATTTAGAGAGATTTTACAGAGTTTCCGCAGCT
 
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JMFS071G09+           TTTATGTTCACCGAATTGAAACAGATATATGGAGAAAATTCTCTTTATATATTTGATTTG
JMSF052E18+           TTTATGTTCACCGAATTGAAACAGATATATGGAGAAAATTCTCTTTATATATTTGATTTG
                      ____________________________________________________________
consensus             TTTATGTTCACCGAATTGAAACAGATATATGGAGAAAATTCTCTTTATATATTTGATTTG
 
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JMFS071G09+           ATTTTCCACTGTTTCTACAACTTCATTTGATTTGTTCTTTGGCGATTTGAATTCGAATCG
JMSF052E18+           ATTTTCCACTGTTTCTACAACTTCATTTGATTTGTTCTTTGGCGATTTGAATTCGAATCG
                      ____________________________________________________________
consensus             ATTTTCCACTGTTTCTACAACTTCATTTGATTTGTTCTTTGGCGATTTGAATTCGAATCG
 
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JMFS071G09+           ATTCCGACAGATTTTTATTTGATTTCGCTTGGAATTCACGTGAGA               
JMSF052E18+           ATTCCGACAGATTTTTATTTGATTTCGCTTGGAATTCACGTGAGATTTCCTGCGTCGGCC
                      ____________________________________________________________
consensus             ATTCCGACAGATTTTTATTTGATTTCGCTTGGAATTCACGTGAGATTTCCTGCGTCGGCC