Contig 010944:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN016P21+                                                                  GCCCG
                      ____________________________________________________________
consensus                                                                    GCCCG
 
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JMFN016P21+           GTAAAGTCCACATGCACCAGTTTGGGGCAAAGTTTACTCAGAACACCCAAGCTAGCATTG
                      ____________________________________________________________
consensus             GTAAAGTCCACATGCACCAGTTTGGGGCAAAGTTTACTCAGAACACCCAAGCTAGCATTG
 
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JMFN016P21+           CCAAATCCAGGGCAGTTGCGAATCCACAAAGATCTCATAGAATTACAAGGAGACAACAGG
                      ____________________________________________________________
consensus             CCAAATCCAGGGCAGTTGCGAATCCACAAAGATCTCATAGAATTACAAGGAGACAACAGG
 
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JMFN016P21+           GGGCATTCAAACGCTAAGTCCTTGATTCCAATGCAGTTTTCTAAACCGAGAGTCTTCAAC
JMFN018K04+                                                     AAACCGAGAGTCTTCAAC
JMSF052D06+                                                                  TCAAC
                      ____________________________________________________________
consensus             GGGCATTCAAACGCTAAGTCCTTGATTCCAATGCAGTTTTCTAAACCGAGAGTCTTCAAC
 
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JMFN016P21+           TTCCCGCCACAATGCACTAGAATACCAAATAACCCAGCCTGGGTGATCCTGTGGCAGTTC
JMFN018K04+           TTCCCGCCACAATGCACTAGAATACCAAATAACCCAGCCTGGGTGATCCTGTGGCAGTTC
JMSF052D06+           TTCCCGCCACAATGCACTAGAATACCAAATAACCCAGCCTGGGTGATCCTGTGGCAGTTC
                      ____________________________________________________________
consensus             TTCCCGCCACAATGCACTAGAATACCAAATAACCCAGCCTGGGTGATCCTGTGGCAGTTC
 
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JMFN016P21+           TCCAACTGAAGGCTTTCAAGTGACCCGGCAGCTTTAGCAAAAGCAACCAATCCATTGTCC
JMFN018K04+           TCCAACTGAAGGCTTTCAAGTGACCCGGCAGCTTTAGCAAAAGCAACCAATCCATTGTCC
JMSF052D06+           TCCAACTGAAGGCTTTCAAGTGACCCGGCAGCTTTAGCAAAAGCAACCAATCCATTGTCC
                      ____________________________________________________________
consensus             TCCAACTGAAGGCTTTCAAGTGACCCGGCAGCTTTAGCAAAAGCAACCAATCCATTGTCC
 
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JMFN016P21+           GATGGAAAAGTGCAACTTCGGAGGCTAAACTGCTTCAGGTTTGGGCAACCTTTACCCATA
JMFN018K04+           GATGGAAAAGTGCAACTTCGGAGGCTAAACTGCTTCAGGTTTGGGCAACCTTTACCCATA
JMSF052D06+           GATGGAAAAGTGCAACTTCGGAGGCTAAACTGCTTCAGGTTTGGGCAACCTTTACCCATA
                      ____________________________________________________________
consensus             GATGGAAAAGTGCAACTTCGGAGGCTAAACTGCTTCAGGTTTGGGCAACCTTTACCCATA
 
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JMFN016P21+           GCTTCAATCCCCAAGTCGGTAACACCAGAGCAATCTATTATCGAAAGGCACCTCAGCTTC
JMFN018K04+           GCTTCAATCCCCAAGTCGGTAACACCAGAGCAATCTATTATCGAAAGGCACCTCAGCTTC
JMSF052D06+           GCTTCAATCCCCAAGTCGGTAACACCAGAGCAATCTATTATCGAAAGGCACCTCAGCTTC
                      ____________________________________________________________
consensus             GCTTCAATCCCCAAGTCGGTAACACCAGAGCAATCTATTATCGAAAGGCACCTCAGCTTC
 
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JMFN016P21+           TGTAGACCCTTACCATTTCCCATGACCCATAAACCTCTCTCAGTTAGATTCTTGAGACCT
JMFN018K04+           TGTAGACCCTTACCATTTCCCATGACCCATAAACCTCTCTCAGTTAGATTCTTGAGACCT
JMSF052D06+           TGTAGACCCTTACCATTTCCCATGACCCATAAACCTCTCTCAGTTAGATTCTTGAGACCT
                      ____________________________________________________________
consensus             TGTAGACCCTTACCATTTCCCATGACCCATAAACCTCTCTCAGTTAGATTCTTGAGACCT
 
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JMFN016P21+           GCGAGAGCTAGGTCAGTCAATGCAACACCGTAGTATCCAATAACAGCAAGACACATATCG
JMFN018K04+           GCGAGAGCTAGGTCAGTCAATGCAACACCGTAGTATCCAATAACAGCAAGACACATATCG
JMSF052D06+           GCGAGAGCTAGGTCAGTCAATGCAACACCGTAGTATCCAATAACAGCAAGACACATATCG
                      ____________________________________________________________
consensus             GCGAGAGCTAGGTCAGTCAATGCAACACCGTAGTATCCAATAACAGCAAGACACATATCG
 
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JMFN016P21+           CTTATGTTCAATGACTGGAGCTTAACCTTCATGAGAACCTCACCAGCTGTCGAGAAAAGA
JMFN018K04+           CTTATGTTCAATGACTGGAGCTTAACCTTCATGAGAACCTCACCAGCTGTCGAGAAAAGA
JMSF052D06+           CTTATGTTCAATGACTGGAGCTTAACCTTCATGAGAACCTCACCAGCTGTCGAGAAAAGA
                      ____________________________________________________________
consensus             CTTATGTTCAATGACTGGAGCTTAACCTTCATGAGAACCTCACCAGCTGTCGAGAAAAGA
 
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JMFN016P21+           CTTCCGATTCCTTGATCCCC                                        
JMFN018K04+           CTTCCGATTCCTTGATCCCCAACAAGAGGGCAGTTCTTCAATGCAACAAATTTCAAGTTA
JMSF052D06+           CTTCCGATTCCTTGATCCCCAACAAGAGGGCAGTTCTTCAATGCAACAAATTTCAAGTTA
                      ____________________________________________________________
consensus             CTTCCGATTCCTTGATCCCCAACAAGAGGGCAGTTCTTCAATGCAACAAATTTCAAGTTA
 
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JMFN018K04+           GGACAGCATGCACCAACAGCTTTCAGGCTTTCATTCCCGATTTTTGAGCAAGATTCGATA
JMSF052D06+           GGACAGCATGCACCAACAGCTTTCAGGCTTTCATTCCCGATTTTTGAGCAAGATTCGATA
                      ____________________________________________________________
consensus             GGACAGCATGCACCAACAGCTTTCAGGCTTTCATTCCCGATTTTTGAGCAAGATTCGATA
 
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JMFN018K04+           GTTAGAGAGGTCAAATTGGGACAACTCTTTGCAATTGCCATCAAGGACTTGTCGGTTATT
JMSF052D06+           GTTAGAGAGGTCAAATTGGGACAACTCTTTGCAATTGCCATCAAGGACTTGTCGGTTATT
                      ____________________________________________________________
consensus             GTTAGAGAGGTCAAATTGGGACAACTCTTTGCAATTGCCATCAAGGACTTGTCGGTTATT
 
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JMFN018K04+           GATGGACAATGGCA                                              
JMSF052D06+           GATGGACAATGGCAAAGATCAAGCTTCTCTAACAGATGGCACTCATTTGCAATCTCGCAT
                      ____________________________________________________________
consensus             GATGGACAATGGCAAAGATCAAGCTTCTCTAACAGATGGCACTCATTTGCAATCTCGCAT
 
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JMSF052D06+           AAACCTTCATCTGTAATAGAAGATATGTTCCACAGAGAAAGGGCCTTTAGAGAAGGACAA
                      ____________________________________________________________
consensus             AAACCTTCATCTGTAATAGAAGATATGTTCCACAGAGAAAGGGCCTTTAGAGAAGGACAA