Contig 010940:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS098C06Sequence627010940 (2)emb|CDP16781.1|1e-15unnamed protein product [Coffea canephora]
JMSF051J09Sequence630010940 (2)emb|CDP16781.1|6e-18unnamed protein product [Coffea canephora]718004344 (3)ref|XP_009791362.1|2e-18PREDICTED: probable acyl-activating enzyme 18, peroxisomal isoform X2 [Nicotian

Alignment

This contig is upended


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JMFS098C06+                       AGAACTTGTGAAATTGTTTAAAACTGNCAATTGGATCCTTGTAAGATG
JMSF051J09+                                                  CAATTGGATCCTTGTAAGATG
                      ____________________________________________________________
consensus                         AGAACTTGTGAAATTGTTTAAAACTGNCAATTGGATCCTTGTAAGATG
 
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JMFS098C06+           CCCCTAGAACCTTGGGACCGTGTGTTTCCATAAGACGACCTAAATTTGTGCATTTAGCTT
JMSF051J09+           CCCCTAGAACCTTGGGACCGTGTGTTTCCATAAGACGACCTAAATTTGTGCATTTAGCTT
                      ____________________________________________________________
consensus             CCCCTAGAACCTTGGGACCGTGTGTTTCCATAAGACGACCTAAATTTGTGCATTTAGCTT
 
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JMFS098C06+           CATCTCTGTAACAGGAAGGATACTAGCATTAGGTCACAAACAAATCATCAAGGTAATATT
JMSF051J09+           CATCTCTGTAACAGGAAGGATACTAGCATTAGGTCACAAACAAATCATCAAGGTAATATT
                      ____________________________________________________________
consensus             CATCTCTGTAACAGGAAGGATACTAGCATTAGGTCACAAACAAATCATCAAGGTAATATT
 
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JMFS098C06+           ATCAAAAGTAACTATAATATAAAATATATTTCTATAATAAAATTTAAATTATATTCAAAA
JMSF051J09+           ATCAAAAGTAACTATAATATAAAATATATTTCTATAATAAAATTTAAATTATATTCAAAA
                      ____________________________________________________________
consensus             ATCAAAAGTAACTATAATATAAAATATATTTCTATAATAAAATTTAAATTATATTCAAAA
 
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JMFS098C06+           TGTAGTTAAATCAGCTCGTTAAGTTACTAATTCAGTAAATTATACTCCGTATTTACTAAA
JMSF051J09+           TGTAGTTAAATCAGCTCGTTAAGTTACTAATTCAGTAAATTNTACTCCGTATTTACTAAA
                      ____________________________________________________________
consensus             TGTAGTTAAATCAGCTCGTTAAGTTACTAATTCAGTAAATTATACTCCGTATTTACTAAA
 
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JMFS098C06+           TTAGCCGACACGAATCCAAATTAAGGTCGAGAGAAGGAGAAAGGGAAGTACAGAGAAGGG
JMSF051J09+           TTAGCCGACACGAATCCAAATTAAGGTCGAGAGAAGGAGAAAGGGAAGTACAGAGAAGGG
                      ____________________________________________________________
consensus             TTAGCCGACACGAATCCAAATTAAGGTCGAGAGAAGGAGAAAGGGAAGTACAGAGAAGGG
 
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JMFS098C06+           AACCAAAAGAGAGGAGGGCCAAGAGAGGACTCATCGTAGTCATGGTAGACGGAGTAATAG
JMSF051J09+           AACCAAAAGAGAGGAGGGCCAAGAGAGGACTCATCGTAGTCATGGTAGACGGAGTAATAG
                      ____________________________________________________________
consensus             AACCAAAAGAGAGGAGGGCCAAGAGAGGACTCATCGTAGTCATGGTAGACGGAGTAATAG
 
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JMFS098C06+           ATGAGCTGATGCAAGGCGTGCGGGTGCCAGGGCTTCAACAACTTCCGAGCTGTTATCTCC
JMSF051J09+           ATGAGCTGATGCAAGGCGTGCGGGTGCCAGGGCTTCAACAACTTCCGAGCTGTTATCTCC
                      ____________________________________________________________
consensus             ATGAGCTGATGCAAGGCGTGCGGGTGCCAGGGCTTCAACAACTTCCGAGCTGTTATCTCC
 
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JMFS098C06+           CGCCACACCTCCTGCGGCTCCTCACCGGCGGCGGCATTGGCTCGAAGGCGACGGCGAGAC
JMSF051J09+           CGCCACACCTCCTGCGGCTCCTCACCGGCGGCGGCATTGGCTNGAAGGCGACGGCGAGAC
                      ____________________________________________________________
consensus             CGCCACACCTCCTGCGGCTCCTCACCGGCGGCGGCATTGGCTCGAAGGCGACGGCGAGAC
 
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JMFS098C06+           AGAGCAACGGCGTCCTTGAGCTCTCCCTCCAGCAACGCCGCTTCCTCCGGCGCAAGTCCG
JMSF051J09+           AGAGCAACGGCGTCCTTGAGCTCTCCCTCCAGCAACGCCGCTTCCTCCGGCGCAAGTCCG
                      ____________________________________________________________
consensus             AGAGCAACGGCGTCCTTGAGCTCTCCCTCCAGCAACGCCGCTTCCTCCGGCGCAAGTCCG
 
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JMFS098C06+           GCTCGCACCAGGTCCTCCGCTCCAACTCCGGCGATGCTC                     
JMSF051J09+           GCTCGCACCAGGTCCTCCGCTCCAACTCCGGCGATGCTCTTCCCCATTTTATCACTGTCC
                      ____________________________________________________________
consensus             GCTCGCACCAGGTCCTCCGCTCCAACTCCGGCGATGCTCTTCCCCATTTTATCACTGTCC