Contig 010937:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS038C01Sequence607010937 (2)gb|EYU35995.1|6e-13hypothetical protein MIMGU_mgv1a001908mg [Erythranthe guttata]
JMSF051F18Sequence701010937 (2)gb|EYU35995.1|2e-12hypothetical protein MIMGU_mgv1a001908mg [Erythranthe guttata]660017285ref|XP_008349834.1|1e-16PREDICTED: serrate RNA effector molecule-like [Malus domestica] ref|XP_008349835

Alignment

This contig is upended


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JMFS038C01+                                 GATGCAAAAGCATCACCAAGTCCACCTCGACCAGAATC
JMSF051F18+                              CCTGATGCAAAAGCATCACCAAGTCCACCTCGACCAGAATC
                      ____________________________________________________________
consensus                                CCTGATGCAAAAGCATCACCAAGTCCACCTCGACCAGAATC
 
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JMFS038C01+           CCAGTCTTGGTAACCACCAGATGAACGACCGGCAAATCGACCAGGGGGCCTCTCATCAGG
JMSF051F18+           CCAGTCTTGGTAACCACCAGATGAACGACCGGCAAATCGACCAGGGGGCCTCTCATCAGG
                      ____________________________________________________________
consensus             CCAGTCTTGGTAACCACCAGATGAACGACCGGCAAATCGACCAGGGGGCCTCTCATCAGG
 
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JMFS038C01+           ATATCCAGCCCTGCCTCCCATTTCACGGTCATACCCACCTGGATAGTCATAGCCACCAAA
JMSF051F18+           ATATCCAGCCCTGCCTCCCATTTCACGGTCATACCCACCTGGATAGTCATAGCCACCAAA
                      ____________________________________________________________
consensus             ATATCCAGCCCTGCCTCCCATTTCACGGTCATACCCACCTGGATAGTCATAGCCACCAAA
 
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JMFS038C01+           CCTCCTATCACCAGGACCATAACCACCTCTGGGTCGGCCATCATATTCATCCCTACGAGA
JMSF051F18+           CCTCCTATCACCAGGACCATAACCACCTCTGGGTCGGCCATCATATTCATCCCTACGAGA
                      ____________________________________________________________
consensus             CCTCCTATCACCAGGACCATAACCACCTCTGGGTCGGCCATCATATTCATCCCTACGAGA
 
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JMFS038C01+           ACGCTTGTAGGGCGGATTTGGAGAGGAGCGCCGGTTAGGAGAATGGCCACCTCGACGGTC
JMSF051F18+           ACGCTTGTAGGGCGGATTTGGAGAGGAGCGCCGGTTAGGAGAATGGCCACCTCGACGGTC
                      ____________________________________________________________
consensus             ACGCTTGTAGGGCGGATTTGGAGAGGAGCGCCGGTTAGGAGAATGGCCACCTCGACGGTC
 
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JMFS038C01+           ACGGTAGAGAGGGGGAGGAGGGCTCGGGCTAGGGCGGCCGCGCTTGTACTCGCGCTCTCG
JMSF051F18+           ACGGTAGAGAGGGGGAGGAGGGCTCGGGCTAGGGCGGCCGCGCTTGTACTCGCGCTCTCG
                      ____________________________________________________________
consensus             ACGGTAGAGAGGGGGAGGAGGGCTCGGGCTAGGGCGGCCGCGCTTGTACTCGCGCTCTCG
 
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JMFS038C01+           AGGAGGTGGGGGCGGTGGTGAGCGGTTGCGATCATAGTAGTCCCCGCGGCCACCCCGCCT
JMSF051F18+           AGGAGGTGGGGGCGGTGGTGAGCGGTTGCGATCATAGTAGTCCCCGCGGCCACCCCGCCT
                      ____________________________________________________________
consensus             AGGAGGTGGGGGCGGTGGTGAGCGGTTGCGATCATAGTAGTCCCCGCGGCCACCCCGCCT
 
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JMFS038C01+           ATCAGAATCCCGTTCATCCCTGCGTTCGCGAGAGTCCCGGTCGCGGCCTCTCCTGGGAGG
JMSF051F18+           ATCAGAATCCCGTTCATCCCTGCGTTCGCGAGAGTCCCGGTCGCGGCCTCTCCTGGGAGG
                      ____________________________________________________________
consensus             ATCAGAATCCCGTTCATCCCTGCGTTCGCGAGAGTCCCGGTCGCGGCCTCTCCTGGGAGG
 
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JMFS038C01+           AGGCGGTGGCGGCGGTGAAGAGTCGGCATCCTCCGCAGACTTGTTGATATTCTCCTTGCT
JMSF051F18+           AGGCGGTGGCGGCGGTGAAGAGTCGGCATCCTCCGCAGACTTGTTGATATTCTCCTTGCT
                      ____________________________________________________________
consensus             AGGCGGTGGCGGCGGTGAAGAGTCGGCATCCTCCGCAGACTTGTTGATATTCTCCTTGCT
 
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JMFS038C01+           ACGCTCGCTCGCAAGGTCCACGACATCCACGCTGGCTTCCATTGCTTCAGTCATTGATGG
JMSF051F18+           ACGCTCGCTCGCAAGGTCCACGACATCCACGCTGGCTTCCATTGCTTCAGTCATTGATGG
                      ____________________________________________________________
consensus             ACGCTCGCTCGCAAGGTCCACGACATCCACGCTGGCTTCCATTGCTTCAGTCATTGATGG
 
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JMFS038C01+           CAGCTCGTCGGACGACGCGGCGGCGGTGT                               
JMSF051F18+           CAGCTCGTCGGACGACGCGGCGGCGGTGTTGGCGGTTCGGAGCAGCTAAACCCTAGGTCC
                      ____________________________________________________________
consensus             CAGCTCGTCGGACGACGCGGCGGCGGTGTTGGCGGTTCGGAGCAGCTAAACCCTAGGTCC
 
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JMSF051F18+           CTCTGCTTGTATCTATGTAATAACGATTGGAAATGAAATCTGAGGATGGGGTCTTTGTTC
                      ____________________________________________________________
consensus             CTCTGCTTGTATCTATGTAATAACGATTGGAAATGAAATCTGAGGATGGGGTCTTTGTTC